RNA–Protein interactions for RNA: ENST00000589882.1

TREM1-206, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

Gene TREM1, Length 1,876 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-206ENST00000589882 PLXNB1O43157 2135 aa8.79□□□□□ -1
TREM1-206ENST00000589882 DNAL4O96015 105 aa8.79□□□□□ -1
TREM1-206ENST00000589882 SUMO4Q6EEV6 95 aa8.79□□□□□ -1
TREM1-206ENST00000589882 SERP1Q9Y6X1 66 aa8.79□□□□□ -1
TREM1-206ENST00000589882 KIF25-AS1Q9Y6Z4 181 aa8.79□□□□□ -1
TREM1-206ENST00000589882 CEP295Q9C0D2 2601 aa8.79□□□□□ -1
TREM1-206ENST00000589882 IGHV1-58A0A0C4DH39 117 aa8.79□□□□□ -1
TREM1-206ENST00000589882 A0A0J9YXV3 536 aa8.79□□□□□ -1
TREM1-206ENST00000589882 USP17L23D6RBM5 183 aa8.79□□□□□ -1
TREM1-206ENST00000589882 LY6LH3BQJ8 138 aa8.79□□□□□ -1
TREM1-206ENST00000589882 M0R1W7 72 aa8.79□□□□□ -1
TREM1-206ENST00000589882 ADAMTSL4-AS1Q5T5F5 129 aa8.79□□□□□ -1
TREM1-206ENST00000589882 C9orf85Q96MD7 179 aa8.79□□□□□ -1
TREM1-206ENST00000589882 ARFGEF3Q5TH69 2177 aa8.78□□□□□ -1
TREM1-206ENST00000589882 LAMA1P25391 3075 aa8.78□□□□□ -1
TREM1-206ENST00000589882 TRAV12-2A0A075B6T6 113 aa8.78□□□□□ -1
TREM1-206ENST00000589882 LINC00315P59091 139 aa8.78□□□□□ -1
TREM1-206ENST00000589882 PRR9Q5T870 116 aa8.78□□□□□ -1
TREM1-206ENST00000589882 LYPD2Q6UXB3 125 aa8.78□□□□□ -1
TREM1-206ENST00000589882 NUP37Q8NFH4 326 aa8.78□□□□□ -1
TREM1-206ENST00000589882 OVOL2Q9BRP0 275 aa8.78□□□□□ -1
TREM1-206ENST00000589882 CFAP47Q6ZTR5 3102 aa8.78□□□□□ -1
TREM1-206ENST00000589882 IGHV3OR16-10A0A075B7F0 116 aa8.77□□□□□ -1.01
TREM1-206ENST00000589882 RNASE4P34096 147 aaKnown RBP8.77□□□□□ -1.01
TREM1-206ENST00000589882 CIRBPQ14011 172 aaKnown RBP8.77□□□□□ -1.01
TREM1-206ENST00000589882 C9orf139Q6ZV77 190 aa8.77□□□□□ -1.01
TREM1-206ENST00000589882 PRIMA1Q86XR5 153 aa8.77□□□□□ -1.01
TREM1-206ENST00000589882 C10orf105Q8TEF2 133 aa8.77□□□□□ -1.01
TREM1-206ENST00000589882 CHD6Q8TD26 2715 aa8.77□□□□□ -1.01
TREM1-206ENST00000589882 EPM2AB3EWF7 344 aa8.77□□□□□ -1.01
TREM1-206ENST00000589882 IGHV3-23P01764 117 aa8.77□□□□□ -1.01
TREM1-206ENST00000589882 ZFAND2AQ8N6M9 145 aa8.77□□□□□ -1.01
TREM1-206ENST00000589882 ASPMQ8IZT6 3477 aa8.76□□□□□ -1.01
TREM1-206ENST00000589882 TRAV12-3A0A0B4J271 114 aa8.76□□□□□ -1.01
TREM1-206ENST00000589882 FAM236DA0A1B0GTK5 79 aa8.76□□□□□ -1.01
TREM1-206ENST00000589882 ADARB2-AS1A8MUL3 147 aa8.76□□□□□ -1.01
TREM1-206ENST00000589882 FAM236CP0DP71 79 aa8.76□□□□□ -1.01
TREM1-206ENST00000589882 MRPS36P82909 103 aaKnown RBP8.76□□□□□ -1.01
TREM1-206ENST00000589882 Q6ZSV7 163 aa8.76□□□□□ -1.01
TREM1-206ENST00000589882 C20orf203Q8NBC4 194 aa8.76□□□□□ -1.01
TREM1-206ENST00000589882 IGLV4-3A0A075B6K6 122 aa8.75□□□□□ -1.01
TREM1-206ENST00000589882 F5H697 171 aa8.75□□□□□ -1.01
TREM1-206ENST00000589882 LPAL2Q16609 132 aa8.75□□□□□ -1.01
TREM1-206ENST00000589882 BEAN1Q3B7T3 259 aa8.75□□□□□ -1.01
TREM1-206ENST00000589882 VSIG2Q96IQ7 327 aa8.75□□□□□ -1.01
TREM1-206ENST00000589882 C16orf92Q96LL3 132 aa8.75□□□□□ -1.01
TREM1-206ENST00000589882 RS1O15537 224 aa8.74□□□□□ -1.01
TREM1-206ENST00000589882 RNASE3P12724 160 aaKnown RBP8.74□□□□□ -1.01
TREM1-206ENST00000589882 LY6G5BQ8NDX9 201 aa8.74□□□□□ -1.01
TREM1-206ENST00000589882 TMEM243Q9BU79 118 aa8.74□□□□□ -1.01
TREM1-206ENST00000589882 FRYQ5TBA9 3013 aa8.74□□□□□ -1.01
TREM1-206ENST00000589882 SDK1Q7Z5N4 2213 aa8.74□□□□□ -1.01
TREM1-206ENST00000589882 WDFY3Q8IZQ1 3526 aa8.74□□□□□ -1.01
TREM1-206ENST00000589882 COX7A1P24310 79 aa8.74□□□□□ -1.01
TREM1-206ENST00000589882 SEC61GP60059 68 aa8.74□□□□□ -1.01
TREM1-206ENST00000589882 LINC00336Q6ZUF6 198 aa8.74□□□□□ -1.01
TREM1-206ENST00000589882 V9GYY9 64 aa8.74□□□□□ -1.01
TREM1-206ENST00000589882 CACNA1EQ15878 2313 aa8.74□□□□□ -1.01
TREM1-206ENST00000589882 IGHG2P01859 326 aa8.73□□□□□ -1.01
TREM1-206ENST00000589882 ATP5EP2Q5VTU8 51 aa8.73□□□□□ -1.01
TREM1-206ENST00000589882 APRG1Q8IVJ8 170 aa8.73□□□□□ -1.01
TREM1-206ENST00000589882 TMEM86BQ8N661 226 aa8.73□□□□□ -1.01
TREM1-206ENST00000589882 ITLN2Q8WWU7 325 aaPredicted RBP8.73□□□□□ -1.01
TREM1-206ENST00000589882 CCL17Q92583 94 aa8.73□□□□□ -1.01
TREM1-206ENST00000589882 OPRPNQ99935 248 aaPredicted RBP8.73□□□□□ -1.01
TREM1-206ENST00000589882 ZNF580Q9UK33 172 aa8.73□□□□□ -1.01
TREM1-206ENST00000589882 IGHV3OR16-8A0A075B7F1 116 aa8.72□□□□□ -1.01
TREM1-206ENST00000589882 RPL35AP18077 110 aaKnown RBP8.72□□□□□ -1.01
TREM1-206ENST00000589882 S100A7L2Q5SY68 101 aa8.72□□□□□ -1.01
TREM1-206ENST00000589882 VMO1Q7Z5L0 202 aa8.72□□□□□ -1.01
TREM1-206ENST00000589882 IGKV3D-7A0A0C4DH55 119 aa8.72□□□□□ -1.01
TREM1-206ENST00000589882 CLPSL1A2RUU4 121 aa8.72□□□□□ -1.01
TREM1-206ENST00000589882 RBMY1BA6NDE4 496 aaKnown RBP8.72□□□□□ -1.01
TREM1-206ENST00000589882 RBMY1EA6NEQ0 496 aaKnown RBP8.72□□□□□ -1.01
TREM1-206ENST00000589882 NDUFA1O15239 70 aa8.72□□□□□ -1.01
TREM1-206ENST00000589882 RBMY1DP0C7P1 496 aaKnown RBP8.72□□□□□ -1.01
TREM1-206ENST00000589882 RBMY1A1P0DJD3 496 aaKnown RBP8.72□□□□□ -1.01
TREM1-206ENST00000589882 RBMY1CP0DJD4 496 aa8.72□□□□□ -1.01
TREM1-206ENST00000589882 CD28P10747 220 aa8.72□□□□□ -1.01
TREM1-206ENST00000589882 FHL2Q14192 279 aa8.72□□□□□ -1.01
TREM1-206ENST00000589882 RBMY1FQ15415 496 aaKnown RBP8.72□□□□□ -1.01
TREM1-206ENST00000589882 LINC01561Q8N1V8 128 aa8.72□□□□□ -1.01
TREM1-206ENST00000589882 MBD3L2Q8NHZ7 208 aaPredicted RBP8.72□□□□□ -1.01
TREM1-206ENST00000589882 SMIM26A0A096LP01 95 aa8.71□□□□□ -1.01
TREM1-206ENST00000589882 DPM3Q9P2X0 92 aa8.71□□□□□ -1.01
TREM1-206ENST00000589882 C22orf24Q9Y442 160 aa8.71□□□□□ -1.01
TREM1-206ENST00000589882 ZZEF1O43149 2961 aa8.7□□□□□ -1.02
TREM1-206ENST00000589882 IGHV3-66A0A0C4DH42 116 aa8.7□□□□□ -1.02
TREM1-206ENST00000589882 GNRH2O43555 120 aa8.7□□□□□ -1.02
TREM1-206ENST00000589882 LINC00308Q8TCZ7 52 aa8.7□□□□□ -1.02
TREM1-206ENST00000589882 UBE2D4Q9Y2X8 147 aa8.7□□□□□ -1.02
TREM1-206ENST00000589882 U3KQE9 123 aa8.7□□□□□ -1.02
TREM1-206ENST00000589882 ABCA1O95477 2261 aa8.7□□□□□ -1.02
TREM1-206ENST00000589882 IGHV3-35A0A0C4DH35 117 aa8.7□□□□□ -1.02
TREM1-206ENST00000589882 KLK9Q2XQG4 91 aa8.7□□□□□ -1.02
TREM1-206ENST00000589882 KLK9Q9UKQ9 250 aa8.7□□□□□ -1.02
TREM1-206ENST00000589882 FAM208BQ5VWN6 2430 aa8.7□□□□□ -1.02
TREM1-206ENST00000589882 IGF2RP11717 2491 aa8.69□□□□□ -1.02
TREM1-206ENST00000589882 IGF1P05019 195 aa8.69□□□□□ -1.02
TREM1-206ENST00000589882 RPL11P62913 178 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms