RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 PRADC1Q9BSG0 188 aa7.15□□□□□ -1.26
SDF2-208ENST00000589788 UPK3BQ9BT76 320 aa7.15□□□□□ -1.26
SDF2-208ENST00000589788 PHLDA3Q9Y5J5 127 aa7.15□□□□□ -1.26
SDF2-208ENST00000589788 HYDINQ4G0P3 5121 aa7.15□□□□□ -1.27
SDF2-208ENST00000589788 A0A1W2PPQ1 181 aa7.14□□□□□ -1.27
SDF2-208ENST00000589788 IGLC6P0CF74 106 aa7.14□□□□□ -1.27
SDF2-208ENST00000589788 GZMBP10144 247 aa7.14□□□□□ -1.27
SDF2-208ENST00000589788 GATA1P15976 413 aaPredicted RBP7.14□□□□□ -1.27
SDF2-208ENST00000589788 TTC32Q5I0X7 151 aa7.14□□□□□ -1.27
SDF2-208ENST00000589788 KCNIP4Q6PIL6 250 aa7.14□□□□□ -1.27
SDF2-208ENST00000589788 SH2D6Q7Z4S9 175 aa7.14□□□□□ -1.27
SDF2-208ENST00000589788 GTSF1Q8WW33 167 aa7.14□□□□□ -1.27
SDF2-208ENST00000589788 SMCO4Q9NRQ5 59 aa7.14□□□□□ -1.27
SDF2-208ENST00000589788 NAT8BQ9UHF3 227 aa7.14□□□□□ -1.27
SDF2-208ENST00000589788 TRAV9-1A0A075B6T8 112 aa7.13□□□□□ -1.27
SDF2-208ENST00000589788 HIGD1CA8MV81 97 aa7.13□□□□□ -1.27
SDF2-208ENST00000589788 M0R381 172 aa7.13□□□□□ -1.27
SDF2-208ENST00000589788 RTL8CO15255 209 aa7.13□□□□□ -1.27
SDF2-208ENST00000589788 NXPH4O95158 308 aa7.13□□□□□ -1.27
SDF2-208ENST00000589788 OR5AL1P0C617 328 aa7.13□□□□□ -1.27
SDF2-208ENST00000589788 S100PP25815 95 aa7.13□□□□□ -1.27
SDF2-208ENST00000589788 CTRLP40313 264 aa7.13□□□□□ -1.27
SDF2-208ENST00000589788 RHOHQ15669 191 aa7.13□□□□□ -1.27
SDF2-208ENST00000589788 LYPD5Q6UWN5 251 aa7.13□□□□□ -1.27
SDF2-208ENST00000589788 CBLN2Q8IUK8 224 aa7.13□□□□□ -1.27
SDF2-208ENST00000589788 SLC25A29Q8N8R3 303 aa7.13□□□□□ -1.27
SDF2-208ENST00000589788 FER1L6-AS1Q8NA97 138 aa7.13□□□□□ -1.27
SDF2-208ENST00000589788 LOC100131303A0A0U1RQF7 123 aa7.12□□□□□ -1.27
SDF2-208ENST00000589788 TRBV6-4A0A1B0GX49 114 aa7.12□□□□□ -1.27
SDF2-208ENST00000589788 F2Z2F3 143 aa7.12□□□□□ -1.27
SDF2-208ENST00000589788 RHODO00212 210 aa7.12□□□□□ -1.27
SDF2-208ENST00000589788 SIVA1O15304 175 aa7.12□□□□□ -1.27
SDF2-208ENST00000589788 SNAI2O43623 268 aa7.12□□□□□ -1.27
SDF2-208ENST00000589788 SCO1O75880 301 aa7.12□□□□□ -1.27
SDF2-208ENST00000589788 ZFP2Q6ZN57 461 aa7.12□□□□□ -1.27
SDF2-208ENST00000589788 ZFP82Q8N141 532 aa7.12□□□□□ -1.27
SDF2-208ENST00000589788 NUP35Q8NFH5 326 aa7.12□□□□□ -1.27
SDF2-208ENST00000589788 CNFNQ9BYD5 112 aa7.12□□□□□ -1.27
SDF2-208ENST00000589788 KRTAP4-7Q9BYR0 210 aa7.12□□□□□ -1.27
SDF2-208ENST00000589788 SCRT2Q9NQ03 307 aa7.12□□□□□ -1.27
SDF2-208ENST00000589788 ELOBQ15370 118 aa7.11□□□□□ -1.27
SDF2-208ENST00000589788 FAM74A4Q5TZK3 123 aa7.11□□□□□ -1.27
SDF2-208ENST00000589788 LYZL1Q6UWQ5 148 aa7.11□□□□□ -1.27
SDF2-208ENST00000589788 C6orf223Q8N319 242 aa7.11□□□□□ -1.27
SDF2-208ENST00000589788 BTF3L4Q96K17 158 aa7.11□□□□□ -1.27
SDF2-208ENST00000589788 YPEL4Q96NS1 127 aa7.11□□□□□ -1.27
SDF2-208ENST00000589788 TPPP3Q9BW30 176 aa7.11□□□□□ -1.27
SDF2-208ENST00000589788 JPT2Q9H910 190 aa7.11□□□□□ -1.27
SDF2-208ENST00000589788 URGCP-MRPS24S4R325 110 aa7.11□□□□□ -1.27
SDF2-208ENST00000589788 VPS13DQ5THJ4 4388 aa7.11□□□□□ -1.27
SDF2-208ENST00000589788 TRBV24-1A0A075B6N3 115 aa7.1□□□□□ -1.27
SDF2-208ENST00000589788 A0A1B0GUT8 65 aa7.1□□□□□ -1.27
SDF2-208ENST00000589788 CACNG7P62955 275 aa7.1□□□□□ -1.27
SDF2-208ENST00000589788 WDR73Q6P4I2 378 aa7.1□□□□□ -1.27
SDF2-208ENST00000589788 ATP5L2Q7Z4Y8 100 aa7.1□□□□□ -1.27
SDF2-208ENST00000589788 BORCS7Q96B45 105 aa7.1□□□□□ -1.27
SDF2-208ENST00000589788 PGLYRP4Q96LB8 373 aa7.1□□□□□ -1.27
SDF2-208ENST00000589788 SAMD10Q9BYL1 202 aa7.1□□□□□ -1.27
SDF2-208ENST00000589788 SPANXN1Q5VSR9 72 aa7.09□□□□□ -1.27
SDF2-208ENST00000589788 OR10AG1Q8NH19 301 aa7.09□□□□□ -1.27
SDF2-208ENST00000589788 TRAV9-2A0A087WT02 112 aa7.08□□□□□ -1.28
SDF2-208ENST00000589788 TGIF2-C20orf24A0A0A6YYL0 155 aa7.08□□□□□ -1.28
SDF2-208ENST00000589788 A0A1B0GW15 77 aa7.08□□□□□ -1.28
SDF2-208ENST00000589788 A0A1B0GXF2 115 aa7.08□□□□□ -1.28
SDF2-208ENST00000589788 SSTP61278 116 aa7.08□□□□□ -1.28
SDF2-208ENST00000589788 RIGQ13278 110 aa7.08□□□□□ -1.28
SDF2-208ENST00000589788 UFSP1Q6NVU6 142 aa7.08□□□□□ -1.28
SDF2-208ENST00000589788 RASL11AQ6T310 242 aa7.08□□□□□ -1.28
SDF2-208ENST00000589788 ATP6V0E2Q8NHE4 81 aa7.08□□□□□ -1.28
SDF2-208ENST00000589788 KRTAP1-5Q9BYS1 174 aa7.08□□□□□ -1.28
SDF2-208ENST00000589788 TRAV8-6A0A0B4J262 113 aa7.07□□□□□ -1.28
SDF2-208ENST00000589788 MUC21A0A0G2JKD1 596 aa7.07□□□□□ -1.28
SDF2-208ENST00000589788 MUC21A0A140T8X8 626 aa7.07□□□□□ -1.28
SDF2-208ENST00000589788 GAGE12JA6NER3 117 aa7.07□□□□□ -1.28
SDF2-208ENST00000589788 S100A8P05109 93 aa7.07□□□□□ -1.28
SDF2-208ENST00000589788 CRYGDP07320 174 aa7.07□□□□□ -1.28
SDF2-208ENST00000589788 NTF3P20783 257 aa7.07□□□□□ -1.28
SDF2-208ENST00000589788 EVI2AP22794 236 aa7.07□□□□□ -1.28
SDF2-208ENST00000589788 HBBP68871 147 aa7.07□□□□□ -1.28
SDF2-208ENST00000589788 GAGE1Q13065 139 aa7.07□□□□□ -1.28
SDF2-208ENST00000589788 GAGE4Q13068 117 aa7.07□□□□□ -1.28
SDF2-208ENST00000589788 GAGE5Q13069 117 aa7.07□□□□□ -1.28
SDF2-208ENST00000589788 OR10J3Q5JRS4 329 aa7.07□□□□□ -1.28
SDF2-208ENST00000589788 MRPL54Q6P161 138 aaKnown RBP7.07□□□□□ -1.28
SDF2-208ENST00000589788 WFDC10BQ8IUB3 73 aa7.07□□□□□ -1.28
SDF2-208ENST00000589788 C14orf178Q8N769 122 aaPredicted RBP7.07□□□□□ -1.28
SDF2-208ENST00000589788 KMT2AQ03164 3969 aa7.07□□□□□ -1.28
SDF2-208ENST00000589788 COLCA2A8K830 154 aa7.06□□□□□ -1.28
SDF2-208ENST00000589788 SMIM17P0DL12 118 aa7.06□□□□□ -1.28
SDF2-208ENST00000589788 TWIST1Q15672 202 aa7.06□□□□□ -1.28
SDF2-208ENST00000589788 ZNF56Q15929 161 aa7.06□□□□□ -1.28
SDF2-208ENST00000589788 COX19Q49B96 90 aa7.06□□□□□ -1.28
SDF2-208ENST00000589788 GATD1Q8NB37 220 aa7.06□□□□□ -1.28
SDF2-208ENST00000589788 GTSF1LQ9H1H1 148 aa7.06□□□□□ -1.28
SDF2-208ENST00000589788 IGHV3-38A0A0C4DH36 116 aa7.05□□□□□ -1.28
SDF2-208ENST00000589788 K7EP13 123 aa7.05□□□□□ -1.28
SDF2-208ENST00000589788 TRGC1P0CF51 173 aa7.05□□□□□ -1.28
SDF2-208ENST00000589788 DNAH10OSP0CZ25 163 aa7.05□□□□□ -1.28
SDF2-208ENST00000589788 CAMPP49913 170 aa7.05□□□□□ -1.28
SDF2-208ENST00000589788 LINC00315P59091 139 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms