RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 GAGE4Q13068 117 aa9.6□□□□□ -0.87
MBD1-220ENST00000589758 GAGE5Q13069 117 aa9.6□□□□□ -0.87
MBD1-220ENST00000589758 GAGE13Q4V321 117 aa9.6□□□□□ -0.87
MBD1-220ENST00000589758 C14orf178Q8N769 122 aaPredicted RBP9.6□□□□□ -0.87
MBD1-220ENST00000589758 Q8N814 137 aa9.6□□□□□ -0.87
MBD1-220ENST00000589758 TRAV8-3A0A0A6YYJ7 113 aa9.59□□□□□ -0.87
MBD1-220ENST00000589758 GATCO43716 136 aaKnown RBP9.59□□□□□ -0.87
MBD1-220ENST00000589758 UFSP1Q6NVU6 142 aa9.59□□□□□ -0.87
MBD1-220ENST00000589758 TMEM241Q24JQ0 296 aa9.58□□□□□ -0.88
MBD1-220ENST00000589758 LYZL1Q6UWQ5 148 aa9.58□□□□□ -0.88
MBD1-220ENST00000589758 LINC01551Q86U37 167 aa9.58□□□□□ -0.88
MBD1-220ENST00000589758 TMEM70Q9BUB7 260 aa9.58□□□□□ -0.88
MBD1-220ENST00000589758 INAFM2P0DMQ5 153 aa9.57□□□□□ -0.88
MBD1-220ENST00000589758 IFITM2Q01629 132 aa9.57□□□□□ -0.88
MBD1-220ENST00000589758 ZNF56Q15929 161 aa9.57□□□□□ -0.88
MBD1-220ENST00000589758 FAM74A3Q4VXF1 159 aa9.57□□□□□ -0.88
MBD1-220ENST00000589758 Q5VSD8 79 aa9.57□□□□□ -0.88
MBD1-220ENST00000589758 Q9UF83 564 aa9.57□□□□□ -0.88
MBD1-220ENST00000589758 F2Z2F3 143 aa9.56□□□□□ -0.88
MBD1-220ENST00000589758 F5H697 171 aa9.56□□□□□ -0.88
MBD1-220ENST00000589758 MGPP08493 103 aa9.56□□□□□ -0.88
MBD1-220ENST00000589758 SMIM17P0DL12 118 aa9.56□□□□□ -0.88
MBD1-220ENST00000589758 CACNG7P62955 275 aa9.56□□□□□ -0.88
MBD1-220ENST00000589758 ADIRFQ15847 76 aa9.56□□□□□ -0.88
MBD1-220ENST00000589758 FAM231DQ6ZW35 169 aa9.56□□□□□ -0.88
MBD1-220ENST00000589758 AP1S3Q96PC3 154 aa9.56□□□□□ -0.88
MBD1-220ENST00000589758 SMDT1Q9H4I9 107 aa9.56□□□□□ -0.88
MBD1-220ENST00000589758 NAT8Q9UHE5 227 aa9.56□□□□□ -0.88
MBD1-220ENST00000589758 COX11Q9Y6N1 276 aa9.56□□□□□ -0.88
MBD1-220ENST00000589758 FAM229AH3BQW9 127 aa9.55□□□□□ -0.88
MBD1-220ENST00000589758 RPL23P62829 140 aaKnown RBP9.55□□□□□ -0.88
MBD1-220ENST00000589758 CLLU1Q5K131 121 aa9.55□□□□□ -0.88
MBD1-220ENST00000589758 DAZ4Q86SG3 579 aaKnown RBP9.55□□□□□ -0.88
MBD1-220ENST00000589758 GTSF1Q8WW33 167 aa9.55□□□□□ -0.88
MBD1-220ENST00000589758 DAZ3Q9NR90 486 aaKnown RBP9.55□□□□□ -0.88
MBD1-220ENST00000589758 URGCP-MRPS24S4R325 110 aa9.55□□□□□ -0.88
MBD1-220ENST00000589758 TRBV10-1A0A0K0K1A3 114 aa9.54□□□□□ -0.88
MBD1-220ENST00000589758 A8MWL6 223 aa9.54□□□□□ -0.88
MBD1-220ENST00000589758 NTF3P20783 257 aa9.54□□□□□ -0.88
MBD1-220ENST00000589758 CTRLP40313 264 aa9.54□□□□□ -0.88
MBD1-220ENST00000589758 RAB4BP61018 213 aa9.54□□□□□ -0.88
MBD1-220ENST00000589758 TWIST1Q15672 202 aa9.54□□□□□ -0.88
MBD1-220ENST00000589758 C15orf54Q8N8G6 183 aa9.54□□□□□ -0.88
MBD1-220ENST00000589758 ISOC2Q96AB3 205 aa9.54□□□□□ -0.88
MBD1-220ENST00000589758 RMI2Q96E14 147 aa9.54□□□□□ -0.88
MBD1-220ENST00000589758 PGLYRP4Q96LB8 373 aa9.54□□□□□ -0.88
MBD1-220ENST00000589758 SMR3BP02814 79 aaPredicted RBP9.53□□□□□ -0.88
MBD1-220ENST00000589758 RPL36AP83881 106 aaKnown RBP9.53□□□□□ -0.88
MBD1-220ENST00000589758 Q8N3U1 123 aa9.53□□□□□ -0.88
MBD1-220ENST00000589758 RPL36ALQ969Q0 106 aaKnown RBP9.53□□□□□ -0.88
MBD1-220ENST00000589758 OSTCQ9NRP0 149 aa9.53□□□□□ -0.88
MBD1-220ENST00000589758 TRGC1P0CF51 173 aa9.52□□□□□ -0.89
MBD1-220ENST00000589758 HERC1Q15751 4861 aa9.52□□□□□ -0.89
MBD1-220ENST00000589758 KCNIP4Q6PIL6 250 aa9.52□□□□□ -0.89
MBD1-220ENST00000589758 NIT1Q86X76 327 aa9.52□□□□□ -0.89
MBD1-220ENST00000589758 CHCHD7Q9BUK0 85 aa9.52□□□□□ -0.89
MBD1-220ENST00000589758 KIF25-AS1Q9Y6Z4 181 aa9.52□□□□□ -0.89
MBD1-220ENST00000589758 TRBV7-3A0A075B6L6 115 aa9.51□□□□□ -0.89
MBD1-220ENST00000589758 ELOBQ15370 118 aa9.51□□□□□ -0.89
MBD1-220ENST00000589758 CT83Q5H943 113 aa9.51□□□□□ -0.89
MBD1-220ENST00000589758 WDR73Q6P4I2 378 aa9.51□□□□□ -0.89
MBD1-220ENST00000589758 OR10G8Q8NGN5 311 aa9.51□□□□□ -0.89
MBD1-220ENST00000589758 V9GYV3 84 aa9.51□□□□□ -0.89
MBD1-220ENST00000589758 FAT1Q14517 4588 aa9.51□□□□□ -0.89
MBD1-220ENST00000589758 A0A087WX48 190 aa9.5□□□□□ -0.89
MBD1-220ENST00000589758 UBE2D3P61077 147 aa9.5□□□□□ -0.89
MBD1-220ENST00000589758 UBE2D2P62837 147 aa9.5□□□□□ -0.89
MBD1-220ENST00000589758 WFDC2Q14508 124 aa9.5□□□□□ -0.89
MBD1-220ENST00000589758 NEXN-AS1Q8NBZ9 246 aa9.5□□□□□ -0.89
MBD1-220ENST00000589758 TSKUQ8WUA8 353 aa9.5□□□□□ -0.89
MBD1-220ENST00000589758 BORCS7Q96B45 105 aa9.5□□□□□ -0.89
MBD1-220ENST00000589758 DPH3P1Q9H4G8 78 aa9.5□□□□□ -0.89
MBD1-220ENST00000589758 HIGD1CA8MV81 97 aa9.49□□□□□ -0.89
MBD1-220ENST00000589758 HAMPP81172 84 aa9.49□□□□□ -0.89
MBD1-220ENST00000589758 SUMO4Q6EEV6 95 aa9.49□□□□□ -0.89
MBD1-220ENST00000589758 Q8N976 141 aa9.49□□□□□ -0.89
MBD1-220ENST00000589758 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.49□□□□□ -0.89
MBD1-220ENST00000589758 CNFNQ9BYD5 112 aa9.49□□□□□ -0.89
MBD1-220ENST00000589758 KLK12Q9UKR0 248 aa9.49□□□□□ -0.89
MBD1-220ENST00000589758 IGKV2D-24A0A075B6R9 120 aa9.48□□□□□ -0.89
MBD1-220ENST00000589758 LECT2O14960 151 aa9.48□□□□□ -0.89
MBD1-220ENST00000589758 FOXA3P55318 350 aaPredicted RBP9.48□□□□□ -0.89
MBD1-220ENST00000589758 Q0VG73 95 aa9.48□□□□□ -0.89
MBD1-220ENST00000589758 SMIM15Q7Z3B0 74 aa9.48□□□□□ -0.89
MBD1-220ENST00000589758 BAALCQ8WXS3 180 aa9.48□□□□□ -0.89
MBD1-220ENST00000589758 GFRA4Q9GZZ7 299 aa9.48□□□□□ -0.89
MBD1-220ENST00000589758 FAM30AQ9NZY2 134 aa9.48□□□□□ -0.89
MBD1-220ENST00000589758 UBE2WQ96B02 151 aa9.47□□□□□ -0.89
MBD1-220ENST00000589758 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.46□□□□□ -0.9
MBD1-220ENST00000589758 TRBV6-8A0A0A6YYG3 113 aa9.46□□□□□ -0.9
MBD1-220ENST00000589758 A0A1B0GUT8 65 aa9.46□□□□□ -0.9
MBD1-220ENST00000589758 TMEM262E9PQX1 116 aa9.46□□□□□ -0.9
MBD1-220ENST00000589758 H7C1H1 209 aa9.46□□□□□ -0.9
MBD1-220ENST00000589758 M0QY20 66 aa9.46□□□□□ -0.9
MBD1-220ENST00000589758 ATRAIDQ6UW56 229 aa9.46□□□□□ -0.9
MBD1-220ENST00000589758 Q6ZSA8 131 aa9.46□□□□□ -0.9
MBD1-220ENST00000589758 NUP35Q8NFH5 326 aa9.46□□□□□ -0.9
MBD1-220ENST00000589758 DNAH8Q96JB1 4490 aa9.46□□□□□ -0.9
MBD1-220ENST00000589758 TRAV26-2A0A0B4J265 109 aa9.45□□□□□ -0.9
MBD1-220ENST00000589758 FAM231BA6NCW3 169 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms