RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 LRP1Q07954 4544 aaKnown RBP5.8□□□□□ -1.48
SDF2-204ENST00000587338 TRGV11A0A075B6L2 103 aa5.8□□□□□ -1.48
SDF2-204ENST00000587338 TRBV24-1A0A075B6N3 115 aa5.8□□□□□ -1.48
SDF2-204ENST00000587338 TRAV9-1A0A075B6T8 112 aa5.8□□□□□ -1.48
SDF2-204ENST00000587338 FAM231BA6NCW3 169 aa5.8□□□□□ -1.48
SDF2-204ENST00000587338 SNURFLB1AK76 121 aa5.8□□□□□ -1.48
SDF2-204ENST00000587338 ARMS2P0C7Q2 107 aa5.8□□□□□ -1.48
SDF2-204ENST00000587338 RAB5AP20339 215 aa5.8□□□□□ -1.48
SDF2-204ENST00000587338 TWIST1Q15672 202 aa5.8□□□□□ -1.48
SDF2-204ENST00000587338 SPANXN1Q5VSR9 72 aa5.8□□□□□ -1.48
SDF2-204ENST00000587338 VSIG2Q96IQ7 327 aa5.8□□□□□ -1.48
SDF2-204ENST00000587338 C20orf144Q9BQM9 153 aa5.8□□□□□ -1.48
SDF2-204ENST00000587338 PYGO2Q9BRQ0 406 aa5.8□□□□□ -1.48
SDF2-204ENST00000587338 TP53TG3Q9ULZ0 132 aa5.8□□□□□ -1.48
SDF2-204ENST00000587338 PHLDA3Q9Y5J5 127 aa5.8□□□□□ -1.48
SDF2-204ENST00000587338 TRGV2A0A075B6R0 118 aa5.79□□□□□ -1.48
SDF2-204ENST00000587338 A0A1B0GUT8 65 aa5.79□□□□□ -1.48
SDF2-204ENST00000587338 F2Z2F3 143 aa5.79□□□□□ -1.48
SDF2-204ENST00000587338 M0R381 172 aa5.79□□□□□ -1.48
SDF2-204ENST00000587338 IGLC6P0CF74 106 aa5.79□□□□□ -1.48
SDF2-204ENST00000587338 Q6ZTI0 123 aa5.79□□□□□ -1.48
SDF2-204ENST00000587338 DEFB104AQ8WTQ1 72 aa5.79□□□□□ -1.48
SDF2-204ENST00000587338 YPEL4Q96NS1 127 aa5.79□□□□□ -1.48
SDF2-204ENST00000587338 MSRB1Q9NZV6 116 aa5.79□□□□□ -1.48
SDF2-204ENST00000587338 ICOSQ9Y6W8 199 aa5.79□□□□□ -1.48
SDF2-204ENST00000587338 TRAV9-2A0A087WT02 112 aa5.78□□□□□ -1.48
SDF2-204ENST00000587338 IGHV3-16A0A0C4DH30 117 aa5.78□□□□□ -1.48
SDF2-204ENST00000587338 NTF3P20783 257 aa5.78□□□□□ -1.48
SDF2-204ENST00000587338 FOXA3P55318 350 aaPredicted RBP5.78□□□□□ -1.48
SDF2-204ENST00000587338 CACNG7P62955 275 aa5.78□□□□□ -1.48
SDF2-204ENST00000587338 HBBP68871 147 aa5.78□□□□□ -1.48
SDF2-204ENST00000587338 ZNF415Q09FC8 603 aa5.78□□□□□ -1.48
SDF2-204ENST00000587338 WDR73Q6P4I2 378 aa5.78□□□□□ -1.48
SDF2-204ENST00000587338 SMIM15Q7Z3B0 74 aa5.78□□□□□ -1.48
SDF2-204ENST00000587338 ATP5L2Q7Z4Y8 100 aa5.78□□□□□ -1.48
SDF2-204ENST00000587338 LINC00528Q8N1L1 170 aa5.78□□□□□ -1.48
SDF2-204ENST00000587338 TMA7Q9Y2S6 64 aaKnown RBP5.78□□□□□ -1.48
SDF2-204ENST00000587338 TRAPPC1Q9Y5R8 145 aa5.78□□□□□ -1.48
SDF2-204ENST00000587338 PAX4O43316 350 aa5.77□□□□□ -1.49
SDF2-204ENST00000587338 PSCAO43653 123 aa5.77□□□□□ -1.49
SDF2-204ENST00000587338 S100A8P05109 93 aa5.77□□□□□ -1.49
SDF2-204ENST00000587338 OR5AL1P0C617 328 aa5.77□□□□□ -1.49
SDF2-204ENST00000587338 RNASE3P12724 160 aaKnown RBP5.77□□□□□ -1.49
SDF2-204ENST00000587338 CTRLP40313 264 aa5.77□□□□□ -1.49
SDF2-204ENST00000587338 FABP9Q0Z7S8 132 aa5.77□□□□□ -1.49
SDF2-204ENST00000587338 TDRG1Q3Y452 100 aa5.77□□□□□ -1.49
SDF2-204ENST00000587338 COX19Q49B96 90 aa5.77□□□□□ -1.49
SDF2-204ENST00000587338 OR10AG1Q8NH19 301 aa5.77□□□□□ -1.49
SDF2-204ENST00000587338 LINC00467Q9BRT7 94 aa5.77□□□□□ -1.49
SDF2-204ENST00000587338 GSN-AS1Q9NRJ2 163 aa5.77□□□□□ -1.49
SDF2-204ENST00000587338 FAM30AQ9NZY2 134 aa5.77□□□□□ -1.49
SDF2-204ENST00000587338 TRGV1A0A0A0MS02 117 aa5.76□□□□□ -1.49
SDF2-204ENST00000587338 A0A1B0GW15 77 aa5.76□□□□□ -1.49
SDF2-204ENST00000587338 C1orf196B1AJZ1 125 aa5.76□□□□□ -1.49
SDF2-204ENST00000587338 SNAI2O43623 268 aa5.76□□□□□ -1.49
SDF2-204ENST00000587338 TRGC2P03986 189 aa5.76□□□□□ -1.49
SDF2-204ENST00000587338 DAZ2Q13117 558 aaKnown RBP5.76□□□□□ -1.49
SDF2-204ENST00000587338 DNLZQ5SXM8 178 aa5.76□□□□□ -1.49
SDF2-204ENST00000587338 RASL11AQ6T310 242 aa5.76□□□□□ -1.49
SDF2-204ENST00000587338 ZFP82Q8N141 532 aa5.76□□□□□ -1.49
SDF2-204ENST00000587338 NTN5Q8WTR8 489 aaPredicted RBP5.76□□□□□ -1.49
SDF2-204ENST00000587338 SSBP4Q9BWG4 385 aaPredicted RBP5.76□□□□□ -1.49
SDF2-204ENST00000587338 GNB1LQ9BYB4 327 aa5.76□□□□□ -1.49
SDF2-204ENST00000587338 MRPL18Q9H0U6 180 aaKnown RBP5.76□□□□□ -1.49
SDF2-204ENST00000587338 A0A1B0GXF2 115 aa5.75□□□□□ -1.49
SDF2-204ENST00000587338 IGHV3-53P01767 116 aa5.75□□□□□ -1.49
SDF2-204ENST00000587338 HLA-DQA1P01909 254 aa5.75□□□□□ -1.49
SDF2-204ENST00000587338 APCSP02743 223 aa5.75□□□□□ -1.49
SDF2-204ENST00000587338 MT-ND6P03923 174 aa5.75□□□□□ -1.49
SDF2-204ENST00000587338 TRGC1P0CF51 173 aa5.75□□□□□ -1.49
SDF2-204ENST00000587338 SMIM17P0DL12 118 aa5.75□□□□□ -1.49
SDF2-204ENST00000587338 EVI2AP22794 236 aa5.75□□□□□ -1.49
SDF2-204ENST00000587338 LYPD5Q6UWN5 251 aa5.75□□□□□ -1.49
SDF2-204ENST00000587338 TMEM136Q6ZRR5 245 aa5.75□□□□□ -1.49
SDF2-204ENST00000587338 WFDC10BQ8IUB3 73 aa5.75□□□□□ -1.49
SDF2-204ENST00000587338 C9orf85Q96MD7 179 aa5.75□□□□□ -1.49
SDF2-204ENST00000587338 FAT3Q8TDW7 4589 aa5.75□□□□□ -1.49
SDF2-204ENST00000587338 LRCOL1A6NCL2 159 aa5.74□□□□□ -1.49
SDF2-204ENST00000587338 M0R2P5 195 aa5.74□□□□□ -1.49
SDF2-204ENST00000587338 MGPP08493 103 aa5.74□□□□□ -1.49
SDF2-204ENST00000587338 RAB5BP61020 215 aa5.74□□□□□ -1.49
SDF2-204ENST00000587338 KIAA1644Q3SXP7 199 aa5.74□□□□□ -1.49
SDF2-204ENST00000587338 ZNF876PQ49A33 203 aa5.74□□□□□ -1.49
SDF2-204ENST00000587338 C14orf178Q8N769 122 aaPredicted RBP5.74□□□□□ -1.49
SDF2-204ENST00000587338 Q8N814 137 aa5.74□□□□□ -1.49
SDF2-204ENST00000587338 SPXQ9BT56 116 aa5.74□□□□□ -1.49
SDF2-204ENST00000587338 MRPL16Q9NX20 251 aaKnown RBP5.74□□□□□ -1.49
SDF2-204ENST00000587338 A0A087WWL8 130 aa5.73□□□□□ -1.49
SDF2-204ENST00000587338 F5H697 171 aa5.73□□□□□ -1.49
SDF2-204ENST00000587338 K7EP13 123 aa5.73□□□□□ -1.49
SDF2-204ENST00000587338 CRYGDP07320 174 aa5.73□□□□□ -1.49
SDF2-204ENST00000587338 SLAQ13239 276 aa5.73□□□□□ -1.49
SDF2-204ENST00000587338 MRPL23Q16540 153 aaKnown RBP5.73□□□□□ -1.49
SDF2-204ENST00000587338 FAM74A4Q5TZK3 123 aa5.73□□□□□ -1.49
SDF2-204ENST00000587338 NEGR1Q7Z3B1 354 aa5.73□□□□□ -1.49
SDF2-204ENST00000587338 AMN1Q8IY45 258 aa5.73□□□□□ -1.49
SDF2-204ENST00000587338 C10orf126Q8N4M7 172 aa5.73□□□□□ -1.49
SDF2-204ENST00000587338 C11orf72Q8NBR9 251 aa5.73□□□□□ -1.49
SDF2-204ENST00000587338 AP1S3Q96PC3 154 aa5.73□□□□□ -1.49
SDF2-204ENST00000587338 CNFNQ9BYD5 112 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms