RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 FUSP35637 526 aaKnown RBP eCLIP13.94□□□□□ -0.18
TOP3A-218ENST00000584669 NTF3P20783 257 aa13.93□□□□□ -0.18
TOP3A-218ENST00000584669 ERVFC1-1P60608 527 aa13.93□□□□□ -0.18
TOP3A-218ENST00000584669 Q8N1X5 172 aa13.93□□□□□ -0.18
TOP3A-218ENST00000584669 LRP1BQ9NZR2 4599 aa13.92□□□□□ -0.18
TOP3A-218ENST00000584669 ZNF727A8MUV8 499 aa13.92□□□□□ -0.18
TOP3A-218ENST00000584669 GATCO43716 136 aaKnown RBP13.92□□□□□ -0.18
TOP3A-218ENST00000584669 GTSF1Q8WW33 167 aa13.92□□□□□ -0.18
TOP3A-218ENST00000584669 Q9HAA7 133 aa13.92□□□□□ -0.18
TOP3A-218ENST00000584669 FAM231DQ6ZW35 169 aa13.91□□□□□ -0.18
TOP3A-218ENST00000584669 DAZ4Q86SG3 579 aaKnown RBP13.91□□□□□ -0.18
TOP3A-218ENST00000584669 DAZ3Q9NR90 486 aaKnown RBP13.91□□□□□ -0.18
TOP3A-218ENST00000584669 TRGC1P0CF51 173 aa13.9□□□□□ -0.18
TOP3A-218ENST00000584669 SUMO4Q6EEV6 95 aa13.9□□□□□ -0.18
TOP3A-218ENST00000584669 WDR73Q6P4I2 378 aa13.9□□□□□ -0.18
TOP3A-218ENST00000584669 LINC01551Q86U37 167 aa13.9□□□□□ -0.18
TOP3A-218ENST00000584669 C9JQL5 133 aa13.89□□□□□ -0.19
TOP3A-218ENST00000584669 M0QY20 66 aa13.89□□□□□ -0.19
TOP3A-218ENST00000584669 SRSF3P84103 164 aaKnown RBP13.89□□□□□ -0.19
TOP3A-218ENST00000584669 NIT1Q86X76 327 aa13.89□□□□□ -0.19
TOP3A-218ENST00000584669 CNFNQ9BYD5 112 aa13.89□□□□□ -0.19
TOP3A-218ENST00000584669 DPH3P1Q9H4G8 78 aa13.89□□□□□ -0.19
TOP3A-218ENST00000584669 A0A087WTM6 91 aa13.88□□□□□ -0.19
TOP3A-218ENST00000584669 TWIST1Q15672 202 aa13.88□□□□□ -0.19
TOP3A-218ENST00000584669 PGPEP1Q9NXJ5 209 aa13.88□□□□□ -0.19
TOP3A-218ENST00000584669 TRBV6-8A0A0A6YYG3 113 aa13.87□□□□□ -0.19
TOP3A-218ENST00000584669 LAGE3Q14657 143 aa13.87□□□□□ -0.19
TOP3A-218ENST00000584669 A8MWL6 223 aa13.86□□□□□ -0.19
TOP3A-218ENST00000584669 PSCAO43653 123 aa13.86□□□□□ -0.19
TOP3A-218ENST00000584669 PGLYRP4Q96LB8 373 aa13.86□□□□□ -0.19
TOP3A-218ENST00000584669 URGCP-MRPS24S4R325 110 aa13.86□□□□□ -0.19
TOP3A-218ENST00000584669 H7C1H1 209 aa13.85□□□□□ -0.19
TOP3A-218ENST00000584669 CT83Q5H943 113 aa13.85□□□□□ -0.19
TOP3A-218ENST00000584669 NTM-AS1Q6ZSK4 140 aa13.85□□□□□ -0.19
TOP3A-218ENST00000584669 FOXA3P55318 350 aaPredicted RBP13.84□□□□□ -0.19
TOP3A-218ENST00000584669 PEA15Q15121 130 aa13.84□□□□□ -0.19
TOP3A-218ENST00000584669 CDPF1Q6NVV7 123 aa13.84□□□□□ -0.19
TOP3A-218ENST00000584669 RASL11AQ6T310 242 aa13.84□□□□□ -0.19
TOP3A-218ENST00000584669 DNAJC30Q96LL9 226 aa13.84□□□□□ -0.19
TOP3A-218ENST00000584669 A0A087WX48 190 aa13.83□□□□□ -0.2
TOP3A-218ENST00000584669 LRCOL1A6NCL2 159 aa13.83□□□□□ -0.2
TOP3A-218ENST00000584669 TMEM241Q24JQ0 296 aa13.83□□□□□ -0.2
TOP3A-218ENST00000584669 FAM74A3Q4VXF1 159 aa13.83□□□□□ -0.2
TOP3A-218ENST00000584669 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.83□□□□□ -0.2
TOP3A-218ENST00000584669 OSTCQ9NRP0 149 aa13.83□□□□□ -0.2
TOP3A-218ENST00000584669 KLK12Q9UKR0 248 aa13.83□□□□□ -0.2
TOP3A-218ENST00000584669 TMEM262E9PQX1 116 aa13.82□□□□□ -0.2
TOP3A-218ENST00000584669 RPL23P62829 140 aaKnown RBP13.82□□□□□ -0.2
TOP3A-218ENST00000584669 TSKUQ8WUA8 353 aa13.82□□□□□ -0.2
TOP3A-218ENST00000584669 ISOC2Q96AB3 205 aa13.82□□□□□ -0.2
TOP3A-218ENST00000584669 APOBP04114 4563 aaKnown RBP13.81□□□□□ -0.2
TOP3A-218ENST00000584669 TRAV8-3A0A0A6YYJ7 113 aa13.81□□□□□ -0.2
TOP3A-218ENST00000584669 TRAV26-2A0A0B4J265 109 aa13.81□□□□□ -0.2
TOP3A-218ENST00000584669 CHCHD5Q9BSY4 110 aa13.81□□□□□ -0.2
TOP3A-218ENST00000584669 CHCHD7Q9BUK0 85 aa13.81□□□□□ -0.2
TOP3A-218ENST00000584669 NIT2Q9NQR4 276 aa13.81□□□□□ -0.2
TOP3A-218ENST00000584669 V9GYV3 84 aa13.81□□□□□ -0.2
TOP3A-218ENST00000584669 HIGD1CA8MV81 97 aa13.8□□□□□ -0.2
TOP3A-218ENST00000584669 ADIRFQ15847 76 aa13.8□□□□□ -0.2
TOP3A-218ENST00000584669 MPV17L2Q567V2 206 aa13.8□□□□□ -0.2
TOP3A-218ENST00000584669 TMEM97Q5BJF2 176 aa13.8□□□□□ -0.2
TOP3A-218ENST00000584669 KCNIP4Q6PIL6 250 aa13.8□□□□□ -0.2
TOP3A-218ENST00000584669 GATD1Q8NB37 220 aa13.8□□□□□ -0.2
TOP3A-218ENST00000584669 EPM2AB3EWF7 344 aa13.79□□□□□ -0.2
TOP3A-218ENST00000584669 C15orf54Q8N8G6 183 aa13.79□□□□□ -0.2
TOP3A-218ENST00000584669 DEFB104AQ8WTQ1 72 aa13.79□□□□□ -0.2
TOP3A-218ENST00000584669 TM2D2Q9BX73 214 aa13.79□□□□□ -0.2
TOP3A-218ENST00000584669 GFRA4Q9GZZ7 299 aa13.79□□□□□ -0.2
TOP3A-218ENST00000584669 SMDT1Q9H4I9 107 aa13.79□□□□□ -0.2
TOP3A-218ENST00000584669 NAT8Q9UHE5 227 aa13.79□□□□□ -0.2
TOP3A-218ENST00000584669 DNAH5Q8TE73 4624 aa13.79□□□□□ -0.2
TOP3A-218ENST00000584669 KRTAP10-1P60331 282 aa13.78□□□□□ -0.2
TOP3A-218ENST00000584669 SMIM15Q7Z3B0 74 aa13.78□□□□□ -0.2
TOP3A-218ENST00000584669 UBE2WQ96B02 151 aa13.78□□□□□ -0.2
TOP3A-218ENST00000584669 BORCS7Q96B45 105 aa13.78□□□□□ -0.2
TOP3A-218ENST00000584669 TRBV25-1A0A075B6N4 114 aa13.77□□□□□ -0.21
TOP3A-218ENST00000584669 GAGE6Q13070 117 aa13.77□□□□□ -0.21
TOP3A-218ENST00000584669 ELOBQ15370 118 aa13.77□□□□□ -0.21
TOP3A-218ENST00000584669 ATRAIDQ6UW56 229 aa13.77□□□□□ -0.21
TOP3A-218ENST00000584669 RPL39LQ96EH5 51 aaKnown RBP13.77□□□□□ -0.21
TOP3A-218ENST00000584669 IGHV1-24A0A0C4DH33 117 aa13.76□□□□□ -0.21
TOP3A-218ENST00000584669 A0A1B0GUT8 65 aa13.76□□□□□ -0.21
TOP3A-218ENST00000584669 FAM231BA6NCW3 169 aa13.76□□□□□ -0.21
TOP3A-218ENST00000584669 WFDC2Q14508 124 aa13.76□□□□□ -0.21
TOP3A-218ENST00000584669 IQCJQ1A5X6 159 aa13.76□□□□□ -0.21
TOP3A-218ENST00000584669 Q8N976 141 aa13.76□□□□□ -0.21
TOP3A-218ENST00000584669 IGKV2D-24A0A075B6R9 120 aa13.75□□□□□ -0.21
TOP3A-218ENST00000584669 ANGP03950 147 aaKnown RBP13.75□□□□□ -0.21
TOP3A-218ENST00000584669 LECT2O14960 151 aa13.74□□□□□ -0.21
TOP3A-218ENST00000584669 XGP55808 180 aa13.74□□□□□ -0.21
TOP3A-218ENST00000584669 ENHOQ6UWT2 76 aa13.74□□□□□ -0.21
TOP3A-218ENST00000584669 Q8N814 137 aa13.74□□□□□ -0.21
TOP3A-218ENST00000584669 NUP35Q8NFH5 326 aa13.74□□□□□ -0.21
TOP3A-218ENST00000584669 GCSHP23434 173 aa13.73□□□□□ -0.21
TOP3A-218ENST00000584669 PKIAP61925 76 aa13.73□□□□□ -0.21
TOP3A-218ENST00000584669 RBX1P62877 108 aa13.73□□□□□ -0.21
TOP3A-218ENST00000584669 FRZBQ92765 325 aa13.73□□□□□ -0.21
TOP3A-218ENST00000584669 RMI2Q96E14 147 aa13.73□□□□□ -0.21
TOP3A-218ENST00000584669 GAS8-AS1O95177 125 aa13.72□□□□□ -0.21
TOP3A-218ENST00000584669 BAALCQ8WXS3 180 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms