RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 ALPK3Q96L96 1907 aa11.52□□□□□ -0.57
ITGB4-206ENST00000579662 TIRAPP58753 221 aa11.52□□□□□ -0.57
ITGB4-206ENST00000579662 NTN5Q8WTR8 489 aaPredicted RBP11.52□□□□□ -0.57
ITGB4-206ENST00000579662 KLK5Q9Y337 293 aaPredicted RBP11.52□□□□□ -0.57
ITGB4-206ENST00000579662 DOPEY2Q9Y3R5 2298 aa11.51□□□□□ -0.57
ITGB4-206ENST00000579662 IGLV2-8P01709 118 aa11.51□□□□□ -0.57
ITGB4-206ENST00000579662 ZNF843Q8N446 348 aa11.51□□□□□ -0.57
ITGB4-206ENST00000579662 CITED1Q99966 193 aa11.51□□□□□ -0.57
ITGB4-206ENST00000579662 SMIM9A6NGZ8 99 aa11.51□□□□□ -0.57
ITGB4-206ENST00000579662 ACYP1P07311 99 aa11.51□□□□□ -0.57
ITGB4-206ENST00000579662 A4D1N5 150 aa11.5□□□□□ -0.57
ITGB4-206ENST00000579662 ZNF80P51504 273 aaPredicted RBP11.5□□□□□ -0.57
ITGB4-206ENST00000579662 WFDC11Q8NEX6 87 aa11.5□□□□□ -0.57
ITGB4-206ENST00000579662 ESM1Q9NQ30 184 aa11.5□□□□□ -0.57
ITGB4-206ENST00000579662 TNRC6AQ8NDV7 1962 aaKnown RBP11.5□□□□□ -0.57
ITGB4-206ENST00000579662 IGLC6P0CF74 106 aa11.5□□□□□ -0.57
ITGB4-206ENST00000579662 C9orf153Q5TBE3 101 aa11.5□□□□□ -0.57
ITGB4-206ENST00000579662 CDPF1Q6NVV7 123 aa11.5□□□□□ -0.57
ITGB4-206ENST00000579662 ANKRD29Q8N6D5 301 aa11.5□□□□□ -0.57
ITGB4-206ENST00000579662 TINCRA0A1B0GVN0 87 aa11.49□□□□□ -0.57
ITGB4-206ENST00000579662 ODF1Q14990 250 aa11.49□□□□□ -0.57
ITGB4-206ENST00000579662 DEFB114Q30KQ6 69 aa11.49□□□□□ -0.57
ITGB4-206ENST00000579662 MLST8Q9BVC4 326 aa11.49□□□□□ -0.57
ITGB4-206ENST00000579662 CREBBPQ92793 2442 aa11.49□□□□□ -0.57
ITGB4-206ENST00000579662 ZFAND3Q9H8U3 227 aa11.49□□□□□ -0.57
ITGB4-206ENST00000579662 IGHV1-58A0A0C4DH39 117 aa11.49□□□□□ -0.57
ITGB4-206ENST00000579662 IL17DQ8TAD2 202 aa11.49□□□□□ -0.57
ITGB4-206ENST00000579662 ABCA1O95477 2261 aa11.48□□□□□ -0.57
ITGB4-206ENST00000579662 GAGE12HA6NDE8 117 aa11.48□□□□□ -0.57
ITGB4-206ENST00000579662 C15orf53Q8NAA6 179 aa11.48□□□□□ -0.57
ITGB4-206ENST00000579662 OPRPNQ99935 248 aaPredicted RBP11.48□□□□□ -0.57
ITGB4-206ENST00000579662 LYRM9A8MSI8 78 aa11.48□□□□□ -0.57
ITGB4-206ENST00000579662 TTC28Q96AY4 2481 aa11.47□□□□□ -0.57
ITGB4-206ENST00000579662 SPAG11BQ08648 103 aa11.47□□□□□ -0.57
ITGB4-206ENST00000579662 SPATA12Q7Z6I5 190 aa11.47□□□□□ -0.57
ITGB4-206ENST00000579662 FUSP35637 526 aaKnown RBP eCLIP11.46□□□□□ -0.57
ITGB4-206ENST00000579662 DEFB4AO15263 64 aa11.46□□□□□ -0.57
ITGB4-206ENST00000579662 CCL25O15444 150 aa11.46□□□□□ -0.57
ITGB4-206ENST00000579662 Q8N6K4 173 aa11.46□□□□□ -0.57
ITGB4-206ENST00000579662 PCDH15Q96QU1 1955 aa11.46□□□□□ -0.57
ITGB4-206ENST00000579662 FRMD6-AS1P0C7T7 363 aa11.45□□□□□ -0.58
ITGB4-206ENST00000579662 LINC00322Q6ZN03 302 aaPredicted RBP11.45□□□□□ -0.58
ITGB4-206ENST00000579662 Q6ZSV7 163 aa11.45□□□□□ -0.58
ITGB4-206ENST00000579662 DEFB105AQ8NG35 78 aa11.45□□□□□ -0.58
ITGB4-206ENST00000579662 CEP192Q8TEP8 1941 aa11.45□□□□□ -0.58
ITGB4-206ENST00000579662 H7C423 109 aa11.45□□□□□ -0.58
ITGB4-206ENST00000579662 PSMG3-AS1Q96PY0 264 aa11.45□□□□□ -0.58
ITGB4-206ENST00000579662 FREM1Q5H8C1 2179 aa11.45□□□□□ -0.58
ITGB4-206ENST00000579662 KLK12Q9UKR0 248 aa11.45□□□□□ -0.58
ITGB4-206ENST00000579662 C20orf173Q96LM9 149 aa11.44□□□□□ -0.58
ITGB4-206ENST00000579662 FAM208BQ5VWN6 2430 aa11.44□□□□□ -0.58
ITGB4-206ENST00000579662 TDRG1Q3Y452 100 aa11.44□□□□□ -0.58
ITGB4-206ENST00000579662 TP53TG3Q9ULZ0 132 aa11.44□□□□□ -0.58
ITGB4-206ENST00000579662 NCOA6Q14686 2063 aaPredicted RBP11.44□□□□□ -0.58
ITGB4-206ENST00000579662 hADV29S1A0JD25 119 aa11.43□□□□□ -0.58
ITGB4-206ENST00000579662 MBD6Q96DN6 1003 aa11.43□□□□□ -0.58
ITGB4-206ENST00000579662 FXYD2P54710 66 aa11.43□□□□□ -0.58
ITGB4-206ENST00000579662 C11orf45Q8TAV5 145 aa11.43□□□□□ -0.58
ITGB4-206ENST00000579662 Q6ZTI0 123 aa11.43□□□□□ -0.58
ITGB4-206ENST00000579662 PSMB8P28062 276 aa11.42□□□□□ -0.58
ITGB4-206ENST00000579662 LINC01620Q4KN68 170 aa11.42□□□□□ -0.58
ITGB4-206ENST00000579662 Q6ZUT4 128 aa11.42□□□□□ -0.58
ITGB4-206ENST00000579662 ANKHD1Q8IWZ3 2542 aaKnown RBP11.41□□□□□ -0.58
ITGB4-206ENST00000579662 MED13LQ71F56 2210 aa11.41□□□□□ -0.58
ITGB4-206ENST00000579662 INAFM1C9JVW0 142 aa11.41□□□□□ -0.58
ITGB4-206ENST00000579662 SHISA2Q6UWI4 295 aa11.41□□□□□ -0.58
ITGB4-206ENST00000579662 ZNF702PQ9H963 129 aa11.41□□□□□ -0.58
ITGB4-206ENST00000579662 NCR3O14931 201 aa11.41□□□□□ -0.58
ITGB4-206ENST00000579662 CRYBA4P53673 196 aa11.41□□□□□ -0.58
ITGB4-206ENST00000579662 IGHV4-4A0A075B6R2 117 aa11.41□□□□□ -0.58
ITGB4-206ENST00000579662 ZFAND2AQ8N6M9 145 aa11.4□□□□□ -0.58
ITGB4-206ENST00000579662 DAND5Q8N907 189 aa11.4□□□□□ -0.58
ITGB4-206ENST00000579662 C14orf177Q52M58 125 aa11.4□□□□□ -0.58
ITGB4-206ENST00000579662 MIR7-3HGQ8N6C7 128 aa11.4□□□□□ -0.59
ITGB4-206ENST00000579662 DIRC1Q969H9 104 aa11.39□□□□□ -0.59
ITGB4-206ENST00000579662 TTTY13Q9BZ97 58 aa11.39□□□□□ -0.59
ITGB4-206ENST00000579662 GDF5OSQ5U4N7 250 aa11.39□□□□□ -0.59
ITGB4-206ENST00000579662 CHD3Q12873 2000 aaKnown RBP11.39□□□□□ -0.59
ITGB4-206ENST00000579662 JMJD7-PLA2G4BH0Y9G9 81 aa11.39□□□□□ -0.59
ITGB4-206ENST00000579662 FAM222AQ5U5X8 452 aa11.39□□□□□ -0.59
ITGB4-206ENST00000579662 TRAV26-1A0A087WT03 109 aa11.38□□□□□ -0.59
ITGB4-206ENST00000579662 SPANXCQ9NY87 97 aa11.38□□□□□ -0.59
ITGB4-206ENST00000579662 MIAQ16674 131 aa11.38□□□□□ -0.59
ITGB4-206ENST00000579662 MIFP14174 115 aa11.38□□□□□ -0.59
ITGB4-206ENST00000579662 UBE2AP49459 152 aa11.38□□□□□ -0.59
ITGB4-206ENST00000579662 NFE4Q86UQ8 179 aa11.38□□□□□ -0.59
ITGB4-206ENST00000579662 TEN1Q86WV5 123 aa11.38□□□□□ -0.59
ITGB4-206ENST00000579662 LRP4O75096 1905 aa11.37□□□□□ -0.59
ITGB4-206ENST00000579662 TRACP01848 142 aa11.37□□□□□ -0.59
ITGB4-206ENST00000579662 PTPRSQ13332 1948 aa11.37□□□□□ -0.59
ITGB4-206ENST00000579662 A0A0B4J2C4 111 aa11.37□□□□□ -0.59
ITGB4-206ENST00000579662 P0DMU3 169 aa11.37□□□□□ -0.59
ITGB4-206ENST00000579662 FAM231AP0DMU4 169 aa11.37□□□□□ -0.59
ITGB4-206ENST00000579662 FAM231CP0DMU5 169 aa11.37□□□□□ -0.59
ITGB4-206ENST00000579662 HILS1P60008 231 aa11.37□□□□□ -0.59
ITGB4-206ENST00000579662 NOTCH3Q9UM47 2321 aa11.37□□□□□ -0.59
ITGB4-206ENST00000579662 MED12LQ86YW9 2145 aa11.36□□□□□ -0.59
ITGB4-206ENST00000579662 SPATA25Q9BR10 227 aa11.36□□□□□ -0.59
ITGB4-206ENST00000579662 H3BT86 120 aa11.36□□□□□ -0.59
ITGB4-206ENST00000579662 REG3AQ06141 175 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms