RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 RASL11AQ6T310 242 aa10.74□□□□□ -0.69
SLC6A4-205ENST00000579221 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.74□□□□□ -0.69
SLC6A4-205ENST00000579221 NEXN-AS1Q8NBZ9 246 aa10.74□□□□□ -0.69
SLC6A4-205ENST00000579221 FRZBQ92765 325 aa10.74□□□□□ -0.69
SLC6A4-205ENST00000579221 BTF3L4Q96K17 158 aa10.74□□□□□ -0.69
SLC6A4-205ENST00000579221 GTSF1LQ9H1H1 148 aa10.74□□□□□ -0.69
SLC6A4-205ENST00000579221 MRPS16Q9Y3D3 137 aaKnown RBP10.74□□□□□ -0.69
SLC6A4-205ENST00000579221 DYNC2H1Q8NCM8 4307 aaKnown RBP10.74□□□□□ -0.69
SLC6A4-205ENST00000579221 LINC00694P0DN24 101 aa10.73□□□□□ -0.69
SLC6A4-205ENST00000579221 RAB4AP20338 218 aa10.73□□□□□ -0.69
SLC6A4-205ENST00000579221 S100PP25815 95 aa10.73□□□□□ -0.69
SLC6A4-205ENST00000579221 GATD1Q8NB37 220 aa10.73□□□□□ -0.69
SLC6A4-205ENST00000579221 NIT2Q9NQR4 276 aa10.73□□□□□ -0.69
SLC6A4-205ENST00000579221 A0A1B0GXF2 115 aa10.72□□□□□ -0.69
SLC6A4-205ENST00000579221 UBE2D3P61077 147 aa10.72□□□□□ -0.69
SLC6A4-205ENST00000579221 UBE2D2P62837 147 aa10.72□□□□□ -0.69
SLC6A4-205ENST00000579221 AMN1Q8IY45 258 aa10.72□□□□□ -0.69
SLC6A4-205ENST00000579221 UPK3BQ9BT76 320 aa10.72□□□□□ -0.69
SLC6A4-205ENST00000579221 TENM2Q9NT68 2774 aa10.71□□□□□ -0.69
SLC6A4-205ENST00000579221 TRAV9-1A0A075B6T8 112 aa10.71□□□□□ -0.69
SLC6A4-205ENST00000579221 TRAV26-2A0A0B4J265 109 aa10.71□□□□□ -0.69
SLC6A4-205ENST00000579221 FAM104BQ5XKR9 115 aa10.71□□□□□ -0.69
SLC6A4-205ENST00000579221 MRAP2Q96G30 205 aa10.71□□□□□ -0.69
SLC6A4-205ENST00000579221 RNF185Q96GF1 192 aa10.71□□□□□ -0.69
SLC6A4-205ENST00000579221 Q9H8V8 135 aa10.71□□□□□ -0.69
SLC6A4-205ENST00000579221 TRAV8-6A0A0B4J262 113 aa10.69□□□□□ -0.7
SLC6A4-205ENST00000579221 LELP1Q5T871 98 aa10.69□□□□□ -0.7
SLC6A4-205ENST00000579221 DAZ4Q86SG3 579 aaKnown RBP10.69□□□□□ -0.7
SLC6A4-205ENST00000579221 DAZ3Q9NR90 486 aaKnown RBP10.69□□□□□ -0.7
SLC6A4-205ENST00000579221 PPP1R17O96001 155 aa10.68□□□□□ -0.7
SLC6A4-205ENST00000579221 MRPL51Q4U2R6 128 aaKnown RBP10.68□□□□□ -0.7
SLC6A4-205ENST00000579221 TMEM97Q5BJF2 176 aa10.68□□□□□ -0.7
SLC6A4-205ENST00000579221 OR10J3Q5JRS4 329 aa10.68□□□□□ -0.7
SLC6A4-205ENST00000579221 URGCP-MRPS24S4R325 110 aa10.68□□□□□ -0.7
SLC6A4-205ENST00000579221 IGHV3-38A0A0C4DH36 116 aa10.67□□□□□ -0.7
SLC6A4-205ENST00000579221 SIVA1O15304 175 aa10.67□□□□□ -0.7
SLC6A4-205ENST00000579221 IGLV2-18A0A075B6J9 118 aa10.66□□□□□ -0.7
SLC6A4-205ENST00000579221 RPL39LQ96EH5 51 aaKnown RBP10.66□□□□□ -0.7
SLC6A4-205ENST00000579221 PLECQ15149 4684 aaKnown RBP10.65□□□□□ -0.7
SLC6A4-205ENST00000579221 TRBV6-5A0A0K0K1A5 114 aa10.65□□□□□ -0.7
SLC6A4-205ENST00000579221 CKS2P33552 79 aa10.65□□□□□ -0.7
SLC6A4-205ENST00000579221 ST20Q9HBF5 79 aa10.65□□□□□ -0.7
SLC6A4-205ENST00000579221 SMKR1H3BMG3 65 aa10.64□□□□□ -0.71
SLC6A4-205ENST00000579221 GAS8-AS1O95177 125 aa10.64□□□□□ -0.71
SLC6A4-205ENST00000579221 PPBPP02775 128 aa10.64□□□□□ -0.71
SLC6A4-205ENST00000579221 COX19Q49B96 90 aa10.64□□□□□ -0.71
SLC6A4-205ENST00000579221 WFDC10BQ8IUB3 73 aa10.64□□□□□ -0.71
SLC6A4-205ENST00000579221 TRAV9-2A0A087WT02 112 aa10.63□□□□□ -0.71
SLC6A4-205ENST00000579221 TRBV6-8A0A0A6YYG3 113 aa10.63□□□□□ -0.71
SLC6A4-205ENST00000579221 NBDYA0A0U1RRE5 68 aa10.63□□□□□ -0.71
SLC6A4-205ENST00000579221 M0R2N4 97 aa10.63□□□□□ -0.71
SLC6A4-205ENST00000579221 NCR2O95944 276 aa10.63□□□□□ -0.71
SLC6A4-205ENST00000579221 PMCHP20382 165 aa10.63□□□□□ -0.71
SLC6A4-205ENST00000579221 KRTAP3-3Q9BYR6 98 aa10.63□□□□□ -0.71
SLC6A4-205ENST00000579221 KRTAP3-2Q9BYR7 98 aa10.63□□□□□ -0.71
SLC6A4-205ENST00000579221 SDHAF1A6NFY7 115 aa10.62□□□□□ -0.71
SLC6A4-205ENST00000579221 RPS10P46783 165 aaKnown RBP10.62□□□□□ -0.71
SLC6A4-205ENST00000579221 COTL1Q14019 142 aa10.62□□□□□ -0.71
SLC6A4-205ENST00000579221 TTC32Q5I0X7 151 aa10.62□□□□□ -0.71
SLC6A4-205ENST00000579221 ATRAIDQ6UW56 229 aa10.62□□□□□ -0.71
SLC6A4-205ENST00000579221 TMEM136Q6ZRR5 245 aa10.62□□□□□ -0.71
SLC6A4-205ENST00000579221 TRBV25-1A0A075B6N4 114 aa10.61□□□□□ -0.71
SLC6A4-205ENST00000579221 IGHV1-24A0A0C4DH33 117 aa10.61□□□□□ -0.71
SLC6A4-205ENST00000579221 D6R8Y8 96 aa10.61□□□□□ -0.71
SLC6A4-205ENST00000579221 I3L3M4 83 aa10.61□□□□□ -0.71
SLC6A4-205ENST00000579221 K7EP13 123 aa10.61□□□□□ -0.71
SLC6A4-205ENST00000579221 DNAH10OSP0CZ25 163 aa10.61□□□□□ -0.71
SLC6A4-205ENST00000579221 NTM-AS1Q6ZSK4 140 aa10.61□□□□□ -0.71
SLC6A4-205ENST00000579221 ORMDL3Q8N138 153 aa10.61□□□□□ -0.71
SLC6A4-205ENST00000579221 NRACQ8N912 160 aa10.61□□□□□ -0.71
SLC6A4-205ENST00000579221 GNB1LQ9BYB4 327 aa10.61□□□□□ -0.71
SLC6A4-205ENST00000579221 TRBV24-1A0A075B6N3 115 aa10.6□□□□□ -0.71
SLC6A4-205ENST00000579221 VCYO14598 125 aa10.6□□□□□ -0.71
SLC6A4-205ENST00000579221 PHOX2AO14813 284 aa10.6□□□□□ -0.71
SLC6A4-205ENST00000579221 TNFRSF6BO95407 300 aa10.6□□□□□ -0.71
SLC6A4-205ENST00000579221 HLA-DQA1P01909 254 aa10.6□□□□□ -0.71
SLC6A4-205ENST00000579221 POLR2KP53803 58 aaKnown RBP10.6□□□□□ -0.71
SLC6A4-205ENST00000579221 ELOBQ15370 118 aa10.6□□□□□ -0.71
SLC6A4-205ENST00000579221 LINC01556Q5JQF7 62 aa10.6□□□□□ -0.71
SLC6A4-205ENST00000579221 Q6ZR54 194 aa10.6□□□□□ -0.71
SLC6A4-205ENST00000579221 C20orf78Q9BR46 151 aa10.6□□□□□ -0.71
SLC6A4-205ENST00000579221 TMEM70Q9BUB7 260 aa10.6□□□□□ -0.71
SLC6A4-205ENST00000579221 SMCO4Q9NRQ5 59 aa10.6□□□□□ -0.71
SLC6A4-205ENST00000579221 ALMS1Q8TCU4 4167 aa10.6□□□□□ -0.71
SLC6A4-205ENST00000579221 TGIF2-C20orf24A0A0A6YYL0 155 aa10.59□□□□□ -0.71
SLC6A4-205ENST00000579221 TMEM262E9PQX1 116 aa10.59□□□□□ -0.71
SLC6A4-205ENST00000579221 APCSP02743 223 aa10.59□□□□□ -0.71
SLC6A4-205ENST00000579221 PKIAP61925 76 aa10.59□□□□□ -0.71
SLC6A4-205ENST00000579221 SUMO2P61956 95 aaKnown RBP10.59□□□□□ -0.71
SLC6A4-205ENST00000579221 IQCJQ1A5X6 159 aa10.59□□□□□ -0.71
SLC6A4-205ENST00000579221 PRELID3AQ96N28 172 aa10.59□□□□□ -0.71
SLC6A4-205ENST00000579221 CHCHD5Q9BSY4 110 aa10.59□□□□□ -0.71
SLC6A4-205ENST00000579221 TRBV27A0A0K0K1C4 114 aa10.58□□□□□ -0.72
SLC6A4-205ENST00000579221 IGHV3-30P01768 117 aa10.58□□□□□ -0.72
SLC6A4-205ENST00000579221 IGHV3-33P01772 117 aa10.58□□□□□ -0.72
SLC6A4-205ENST00000579221 IGHV3-30-3P0DP02 117 aa10.58□□□□□ -0.72
SLC6A4-205ENST00000579221 IGHV3-30-5P0DP03 117 aa10.58□□□□□ -0.72
SLC6A4-205ENST00000579221 AMTP48728 403 aa10.58□□□□□ -0.72
SLC6A4-205ENST00000579221 NIT1Q86X76 327 aa10.58□□□□□ -0.72
SLC6A4-205ENST00000579221 C10orf126Q8N4M7 172 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms