RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 TWIST1Q15672 202 aa15.03■□□□□ -0
SMARCD2-206ENST00000577990 PCLOQ9Y6V0 5065 aa15.02■□□□□ -0
SMARCD2-206ENST00000577990 DPH3P1Q9H4G8 78 aa15.02■□□□□ -0
SMARCD2-206ENST00000577990 NAT8Q9UHE5 227 aa15.02■□□□□ -0
SMARCD2-206ENST00000577990 RPL23P62829 140 aaKnown RBP15.01□□□□□ -0.01
SMARCD2-206ENST00000577990 SUMO4Q6EEV6 95 aa15.01□□□□□ -0.01
SMARCD2-206ENST00000577990 C15orf54Q8N8G6 183 aa15.01□□□□□ -0.01
SMARCD2-206ENST00000577990 ISOC2Q96AB3 205 aa15.01□□□□□ -0.01
SMARCD2-206ENST00000577990 ADIRFQ15847 76 aa15□□□□□ -0.01
SMARCD2-206ENST00000577990 Q6ZRN7 208 aaPredicted RBP15□□□□□ -0.01
SMARCD2-206ENST00000577990 NFE4Q86UQ8 179 aa15□□□□□ -0.01
SMARCD2-206ENST00000577990 TSKUQ8WUA8 353 aa15□□□□□ -0.01
SMARCD2-206ENST00000577990 PGLYRP4Q96LB8 373 aa15□□□□□ -0.01
SMARCD2-206ENST00000577990 TNFRSF18Q9Y5U5 241 aa15□□□□□ -0.01
SMARCD2-206ENST00000577990 H7C1H1 209 aa14.99□□□□□ -0.01
SMARCD2-206ENST00000577990 M0QY20 66 aa14.99□□□□□ -0.01
SMARCD2-206ENST00000577990 IGHV3-30P01768 117 aa14.99□□□□□ -0.01
SMARCD2-206ENST00000577990 IGHV3-33P01772 117 aa14.99□□□□□ -0.01
SMARCD2-206ENST00000577990 IGHV3-30-3P0DP02 117 aa14.99□□□□□ -0.01
SMARCD2-206ENST00000577990 IGHV3-30-5P0DP03 117 aa14.99□□□□□ -0.01
SMARCD2-206ENST00000577990 FOXA3P55318 350 aaPredicted RBP14.99□□□□□ -0.01
SMARCD2-206ENST00000577990 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.98□□□□□ -0.01
SMARCD2-206ENST00000577990 GFRA4Q9GZZ7 299 aa14.98□□□□□ -0.01
SMARCD2-206ENST00000577990 V9GYV3 84 aa14.98□□□□□ -0.01
SMARCD2-206ENST00000577990 FAM231BA6NCW3 169 aa14.97□□□□□ -0.01
SMARCD2-206ENST00000577990 BORCS7Q96B45 105 aa14.97□□□□□ -0.01
SMARCD2-206ENST00000577990 HIGD1CA8MV81 97 aa14.96□□□□□ -0.01
SMARCD2-206ENST00000577990 IBA57-AS1B1ANH7 110 aa14.96□□□□□ -0.01
SMARCD2-206ENST00000577990 SMIM15Q7Z3B0 74 aa14.96□□□□□ -0.01
SMARCD2-206ENST00000577990 DNAJC30Q96LL9 226 aa14.96□□□□□ -0.01
SMARCD2-206ENST00000577990 CLLU1Q5K131 121 aa14.95□□□□□ -0.02
SMARCD2-206ENST00000577990 RASL11AQ6T310 242 aa14.95□□□□□ -0.02
SMARCD2-206ENST00000577990 DAZ4Q86SG3 579 aaKnown RBP14.95□□□□□ -0.02
SMARCD2-206ENST00000577990 Q8N3U1 123 aa14.95□□□□□ -0.02
SMARCD2-206ENST00000577990 DAZ3Q9NR90 486 aaKnown RBP14.95□□□□□ -0.02
SMARCD2-206ENST00000577990 RYR1P21817 5038 aa14.93□□□□□ -0.02
SMARCD2-206ENST00000577990 TRBV6-8A0A0A6YYG3 113 aa14.93□□□□□ -0.02
SMARCD2-206ENST00000577990 A0A1B0GUT8 65 aa14.93□□□□□ -0.02
SMARCD2-206ENST00000577990 IFITM2Q01629 132 aa14.93□□□□□ -0.02
SMARCD2-206ENST00000577990 NIT1Q86X76 327 aa14.93□□□□□ -0.02
SMARCD2-206ENST00000577990 TMEM97Q5BJF2 176 aa14.92□□□□□ -0.02
SMARCD2-206ENST00000577990 URGCP-MRPS24S4R325 110 aa14.92□□□□□ -0.02
SMARCD2-206ENST00000577990 LAGE3Q14657 143 aa14.91□□□□□ -0.02
SMARCD2-206ENST00000577990 NIT2Q9NQR4 276 aa14.91□□□□□ -0.02
SMARCD2-206ENST00000577990 LRP1BQ9NZR2 4599 aa14.91□□□□□ -0.02
SMARCD2-206ENST00000577990 NUP35Q8NFH5 326 aa14.9□□□□□ -0.02
SMARCD2-206ENST00000577990 CHCHD7Q9BUK0 85 aa14.9□□□□□ -0.02
SMARCD2-206ENST00000577990 Q9HAA7 133 aa14.9□□□□□ -0.02
SMARCD2-206ENST00000577990 HSPG2P98160 4391 aa14.9□□□□□ -0.02
SMARCD2-206ENST00000577990 TRAV26-2A0A0B4J265 109 aa14.89□□□□□ -0.03
SMARCD2-206ENST00000577990 KCNIP4Q6PIL6 250 aa14.89□□□□□ -0.03
SMARCD2-206ENST00000577990 NTM-AS1Q6ZSK4 140 aa14.89□□□□□ -0.03
SMARCD2-206ENST00000577990 GATD1Q8NB37 220 aa14.89□□□□□ -0.03
SMARCD2-206ENST00000577990 NAT8BQ9UHF3 227 aa14.89□□□□□ -0.03
SMARCD2-206ENST00000577990 DNAH5Q8TE73 4624 aa14.88□□□□□ -0.03
SMARCD2-206ENST00000577990 A0A087WX48 190 aa14.88□□□□□ -0.03
SMARCD2-206ENST00000577990 FRZBQ92765 325 aa14.88□□□□□ -0.03
SMARCD2-206ENST00000577990 SMIM27A0A1W2PRY6 76 aa14.87□□□□□ -0.03
SMARCD2-206ENST00000577990 TMEM262E9PQX1 116 aa14.87□□□□□ -0.03
SMARCD2-206ENST00000577990 RIGQ13278 110 aa14.87□□□□□ -0.03
SMARCD2-206ENST00000577990 CHCHD5Q9BSY4 110 aa14.87□□□□□ -0.03
SMARCD2-206ENST00000577990 TMEM191AQ9H0A3 160 aa14.87□□□□□ -0.03
SMARCD2-206ENST00000577990 TRBV25-1A0A075B6N4 114 aa14.86□□□□□ -0.03
SMARCD2-206ENST00000577990 PKIAP61925 76 aa14.86□□□□□ -0.03
SMARCD2-206ENST00000577990 SPATA12Q7Z6I5 190 aa14.86□□□□□ -0.03
SMARCD2-206ENST00000577990 TRAV8-3A0A0A6YYJ7 113 aa14.85□□□□□ -0.03
SMARCD2-206ENST00000577990 EREGO14944 169 aa14.85□□□□□ -0.03
SMARCD2-206ENST00000577990 PSCAO43653 123 aa14.85□□□□□ -0.03
SMARCD2-206ENST00000577990 IQCJQ1A5X6 159 aa14.85□□□□□ -0.03
SMARCD2-206ENST00000577990 IGHV1-24A0A0C4DH33 117 aa14.84□□□□□ -0.03
SMARCD2-206ENST00000577990 C16orf90A8MZG2 172 aa14.84□□□□□ -0.03
SMARCD2-206ENST00000577990 ELOBQ15370 118 aa14.84□□□□□ -0.03
SMARCD2-206ENST00000577990 RPL39LQ96EH5 51 aaKnown RBP14.84□□□□□ -0.03
SMARCD2-206ENST00000577990 KLK12Q9UKR0 248 aa14.84□□□□□ -0.03
SMARCD2-206ENST00000577990 ABCA13Q86UQ4 5058 aa14.84□□□□□ -0.03
SMARCD2-206ENST00000577990 A0A087WTM6 91 aa14.83□□□□□ -0.04
SMARCD2-206ENST00000577990 PNRC1Q12796 327 aaPredicted RBP14.83□□□□□ -0.04
SMARCD2-206ENST00000577990 MPV17L2Q567V2 206 aa14.83□□□□□ -0.04
SMARCD2-206ENST00000577990 TM2D2Q9BX73 214 aa14.83□□□□□ -0.04
SMARCD2-206ENST00000577990 KRTAP10-2P60368 255 aa14.82□□□□□ -0.04
SMARCD2-206ENST00000577990 GAGE6Q13070 117 aa14.81□□□□□ -0.04
SMARCD2-206ENST00000577990 COTL1Q14019 142 aa14.81□□□□□ -0.04
SMARCD2-206ENST00000577990 AMN1Q8IY45 258 aa14.81□□□□□ -0.04
SMARCD2-206ENST00000577990 RNF185Q96GF1 192 aa14.81□□□□□ -0.04
SMARCD2-206ENST00000577990 APOBP04114 4563 aaKnown RBP14.81□□□□□ -0.04
SMARCD2-206ENST00000577990 PPP1R2P9O14990 202 aa14.8□□□□□ -0.04
SMARCD2-206ENST00000577990 RAB4AP20338 218 aa14.8□□□□□ -0.04
SMARCD2-206ENST00000577990 ATRAIDQ6UW56 229 aa14.8□□□□□ -0.04
SMARCD2-206ENST00000577990 UQCC3Q6UW78 93 aa14.8□□□□□ -0.04
SMARCD2-206ENST00000577990 UBE2WQ96B02 151 aa14.8□□□□□ -0.04
SMARCD2-206ENST00000577990 TMEM243Q9BU79 118 aa14.8□□□□□ -0.04
SMARCD2-206ENST00000577990 DEFB104AQ8WTQ1 72 aa14.79□□□□□ -0.04
SMARCD2-206ENST00000577990 RMI2Q96E14 147 aa14.79□□□□□ -0.04
SMARCD2-206ENST00000577990 MRAP2Q96G30 205 aa14.79□□□□□ -0.04
SMARCD2-206ENST00000577990 TRBV6-5A0A0K0K1A5 114 aa14.78□□□□□ -0.04
SMARCD2-206ENST00000577990 A0A1B0GW15 77 aa14.78□□□□□ -0.04
SMARCD2-206ENST00000577990 SDHAF1A6NFY7 115 aa14.78□□□□□ -0.04
SMARCD2-206ENST00000577990 Q8N976 141 aa14.78□□□□□ -0.04
SMARCD2-206ENST00000577990 LRCOL1A6NCL2 159 aa14.77□□□□□ -0.05
SMARCD2-206ENST00000577990 GAS8-AS1O95177 125 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms