RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 MUC6Q6W4X9 2439 aa1.35□□□□□ -2.19
TOP2A-203ENST00000577706 MARF1Q9Y4F3 1742 aaKnown RBP1.35□□□□□ -2.19
TOP2A-203ENST00000577706 EML5Q05BV3 1969 aa1.34□□□□□ -2.19
TOP2A-203ENST00000577706 KIAA1549Q9HCM3 1950 aa1.34□□□□□ -2.19
TOP2A-203ENST00000577706 TRBV7-1A0A0A6YYK4 115 aa1.34□□□□□ -2.19
TOP2A-203ENST00000577706 TRAV22A0A0B4J277 110 aa1.34□□□□□ -2.19
TOP2A-203ENST00000577706 IGKV3D-7A0A0C4DH55 119 aa1.34□□□□□ -2.19
TOP2A-203ENST00000577706 IGKV3OR2-268A0A0C4DH90 116 aa1.34□□□□□ -2.19
TOP2A-203ENST00000577706 NBDYA0A0U1RRE5 68 aa1.34□□□□□ -2.19
TOP2A-203ENST00000577706 IGLC7A0M8Q6 106 aa1.34□□□□□ -2.19
TOP2A-203ENST00000577706 IGKV2-29A2NJV5 120 aaPredicted RBP1.34□□□□□ -2.19
TOP2A-203ENST00000577706 NAP1L6A6NFF2 107 aa1.34□□□□□ -2.19
TOP2A-203ENST00000577706 CHKB-CPT1BH3BT56 60 aa1.34□□□□□ -2.19
TOP2A-203ENST00000577706 ATOX1O00244 68 aa1.34□□□□□ -2.19
TOP2A-203ENST00000577706 NXT2Q9NPJ8 142 aaKnown RBP1.34□□□□□ -2.19
TOP2A-203ENST00000577706 ERVK-7P63135 1459 aa1.34□□□□□ -2.19
TOP2A-203ENST00000577706 ABCA3Q99758 1704 aa1.34□□□□□ -2.2
TOP2A-203ENST00000577706 PRR14LQ5THK1 2151 aa1.34□□□□□ -2.2
TOP2A-203ENST00000577706 MICAL3Q7RTP6 2002 aa1.33□□□□□ -2.2
TOP2A-203ENST00000577706 ANK1P16157 1881 aa1.33□□□□□ -2.2
TOP2A-203ENST00000577706 MYLKQ15746 1914 aa1.33□□□□□ -2.2
TOP2A-203ENST00000577706 TRBV7-3A0A075B6L6 115 aa1.33□□□□□ -2.2
TOP2A-203ENST00000577706 A0A0J9YY99 117 aa1.33□□□□□ -2.2
TOP2A-203ENST00000577706 SYS1-DBNDD2H3BUS1 97 aa1.33□□□□□ -2.2
TOP2A-203ENST00000577706 PDE6GP18545 87 aa1.33□□□□□ -2.2
TOP2A-203ENST00000577706 Q8N6K4 173 aa1.33□□□□□ -2.2
TOP2A-203ENST00000577706 SERP2Q8N6R1 65 aa1.33□□□□□ -2.2
TOP2A-203ENST00000577706 NDUFA4L2Q9NRX3 87 aa1.33□□□□□ -2.2
TOP2A-203ENST00000577706 CACFD1Q9UGQ2 172 aa1.33□□□□□ -2.2
TOP2A-203ENST00000577706 LTBP2Q14767 1821 aa1.33□□□□□ -2.2
TOP2A-203ENST00000577706 MYO9BQ13459 2157 aa1.32□□□□□ -2.2
TOP2A-203ENST00000577706 EDC4Q6P2E9 1401 aaKnown RBP1.32□□□□□ -2.2
TOP2A-203ENST00000577706 MYH9P35579 1960 aaKnown RBP1.32□□□□□ -2.2
TOP2A-203ENST00000577706 MAGI2Q86UL8 1455 aa1.32□□□□□ -2.2
TOP2A-203ENST00000577706 NRXN1Q9ULB1 1477 aa1.32□□□□□ -2.2
TOP2A-203ENST00000577706 LAMB2P55268 1798 aa1.32□□□□□ -2.2
TOP2A-203ENST00000577706 TRBV6-7A0A0A0MS04 114 aa1.32□□□□□ -2.2
TOP2A-203ENST00000577706 H7BZZ5 65 aa1.32□□□□□ -2.2
TOP2A-203ENST00000577706 EDDM3BP56851 147 aa1.32□□□□□ -2.2
TOP2A-203ENST00000577706 UBE2D3P61077 147 aa1.32□□□□□ -2.2
TOP2A-203ENST00000577706 UBE2D2P62837 147 aa1.32□□□□□ -2.2
TOP2A-203ENST00000577706 WFDC2Q14508 124 aa1.32□□□□□ -2.2
TOP2A-203ENST00000577706 FXYD3Q14802 87 aa1.32□□□□□ -2.2
TOP2A-203ENST00000577706 ETDBQ3ZM63 59 aa1.32□□□□□ -2.2
TOP2A-203ENST00000577706 LINC00208Q96KT6 92 aa1.32□□□□□ -2.2
TOP2A-203ENST00000577706 OBSCN-AS1Q96MR7 158 aa1.32□□□□□ -2.2
TOP2A-203ENST00000577706 CYP4F30PQ9H0H9 118 aa1.32□□□□□ -2.2
TOP2A-203ENST00000577706 SPCS1Q9Y6A9 102 aa1.32□□□□□ -2.2
TOP2A-203ENST00000577706 DIP2BQ9P265 1576 aa1.32□□□□□ -2.2
TOP2A-203ENST00000577706 ZFHX2Q9C0A1 2572 aaPredicted RBP1.32□□□□□ -2.2
TOP2A-203ENST00000577706 TET3O43151 1660 aa1.32□□□□□ -2.2
TOP2A-203ENST00000577706 UACAQ9BZF9 1416 aa1.32□□□□□ -2.2
TOP2A-203ENST00000577706 TOP2BQ02880 1626 aa1.31□□□□□ -2.2
TOP2A-203ENST00000577706 PHRF1Q9P1Y6 1649 aaKnown RBP1.31□□□□□ -2.2
TOP2A-203ENST00000577706 A0A087WTM6 91 aa1.31□□□□□ -2.2
TOP2A-203ENST00000577706 PPP1R17O96001 155 aa1.31□□□□□ -2.2
TOP2A-203ENST00000577706 IGHV3-30P01768 117 aa1.31□□□□□ -2.2
TOP2A-203ENST00000577706 GYPAP02724 150 aa1.31□□□□□ -2.2
TOP2A-203ENST00000577706 IGHV3-30-5P0DP03 117 aa1.31□□□□□ -2.2
TOP2A-203ENST00000577706 CCL3L1P16619 93 aa1.31□□□□□ -2.2
TOP2A-203ENST00000577706 FXYD4P59646 89 aa1.31□□□□□ -2.2
TOP2A-203ENST00000577706 ZNF56Q15929 161 aa1.31□□□□□ -2.2
TOP2A-203ENST00000577706 MPV17LQ2QL34 196 aa1.31□□□□□ -2.2
TOP2A-203ENST00000577706 Q5BKY6 102 aa1.31□□□□□ -2.2
TOP2A-203ENST00000577706 FDCSPQ8NFU4 85 aa1.31□□□□□ -2.2
TOP2A-203ENST00000577706 CHD1O14646 1710 aa1.31□□□□□ -2.2
TOP2A-203ENST00000577706 TNS1Q9HBL0 1735 aaKnown RBP1.31□□□□□ -2.2
TOP2A-203ENST00000577706 MLH3Q9UHC1 1453 aa1.31□□□□□ -2.2
TOP2A-203ENST00000577706 ABCC3O15438 1527 aa1.3□□□□□ -2.2
TOP2A-203ENST00000577706 PIGBOS1A0A0B4J2F0 54 aa1.3□□□□□ -2.2
TOP2A-203ENST00000577706 J3QRE1 110 aa1.3□□□□□ -2.2
TOP2A-203ENST00000577706 HMGN4O00479 90 aa1.3□□□□□ -2.2
TOP2A-203ENST00000577706 HCRTO43612 131 aa1.3□□□□□ -2.2
TOP2A-203ENST00000577706 EFNA4P52798 201 aa1.3□□□□□ -2.2
TOP2A-203ENST00000577706 KRTDAPP60985 99 aa1.3□□□□□ -2.2
TOP2A-203ENST00000577706 SSBP1Q04837 148 aaKnown RBP1.3□□□□□ -2.2
TOP2A-203ENST00000577706 KRTAP13-4Q3LI77 160 aa1.3□□□□□ -2.2
TOP2A-203ENST00000577706 LINC00322Q6ZN03 302 aaPredicted RBP1.3□□□□□ -2.2
TOP2A-203ENST00000577706 ZNF818PQ6ZRF7 136 aa1.3□□□□□ -2.2
TOP2A-203ENST00000577706 LINC00299Q6ZSB3 139 aa1.3□□□□□ -2.2
TOP2A-203ENST00000577706 C5orf56Q8N8D9 126 aa1.3□□□□□ -2.2
TOP2A-203ENST00000577706 COX7B2Q8TF08 81 aa1.3□□□□□ -2.2
TOP2A-203ENST00000577706 S100A13Q99584 98 aa1.3□□□□□ -2.2
TOP2A-203ENST00000577706 MGST2Q99735 147 aa1.3□□□□□ -2.2
TOP2A-203ENST00000577706 UQCR10Q9UDW1 63 aa1.3□□□□□ -2.2
TOP2A-203ENST00000577706 PRO1854Q9UHT4 67 aa1.3□□□□□ -2.2
TOP2A-203ENST00000577706 PLXNA4Q9HCM2 1894 aa1.3□□□□□ -2.2
TOP2A-203ENST00000577706 MRC1P22897 1456 aa1.3□□□□□ -2.2
TOP2A-203ENST00000577706 ARHGEF12Q9NZN5 1544 aa1.3□□□□□ -2.2
TOP2A-203ENST00000577706 LAMB1P07942 1786 aa1.29□□□□□ -2.2
TOP2A-203ENST00000577706 A0A1W2PPM0 123 aa1.29□□□□□ -2.2
TOP2A-203ENST00000577706 HIGD1CA8MV81 97 aa1.29□□□□□ -2.2
TOP2A-203ENST00000577706 FXYD1O00168 92 aa1.29□□□□□ -2.2
TOP2A-203ENST00000577706 ELOF1P60002 83 aaKnown RBP1.29□□□□□ -2.2
TOP2A-203ENST00000577706 DEFA5Q01523 94 aa1.29□□□□□ -2.2
TOP2A-203ENST00000577706 NUMA1Q14980 2115 aa1.29□□□□□ -2.2
TOP2A-203ENST00000577706 PMCHL1Q16048 86 aa1.29□□□□□ -2.2
TOP2A-203ENST00000577706 NMSQ5H8A3 153 aa1.29□□□□□ -2.2
TOP2A-203ENST00000577706 Q86TA4 180 aa1.29□□□□□ -2.2
TOP2A-203ENST00000577706 C4orf3Q8WVX3 66 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms