RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 C10orf126Q8N4M7 172 aa6.27□□□□□ -1.41
CAPN3-219ENST00000569136 OCC1Q8TAD7 63 aa6.27□□□□□ -1.41
CAPN3-219ENST00000569136 SAMD10Q9BYL1 202 aa6.27□□□□□ -1.41
CAPN3-219ENST00000569136 JPT2Q9H910 190 aa6.27□□□□□ -1.41
CAPN3-219ENST00000569136 LY96Q9Y6Y9 160 aa6.27□□□□□ -1.41
CAPN3-219ENST00000569136 IGHV3-38A0A0C4DH36 116 aa6.26□□□□□ -1.41
CAPN3-219ENST00000569136 LOC100131303A0A0U1RQF7 123 aa6.26□□□□□ -1.41
CAPN3-219ENST00000569136 DNAH10OSP0CZ25 163 aa6.26□□□□□ -1.41
CAPN3-219ENST00000569136 SMIM17P0DL12 118 aa6.26□□□□□ -1.41
CAPN3-219ENST00000569136 RPL19P84098 196 aaKnown RBP6.26□□□□□ -1.41
CAPN3-219ENST00000569136 LELP1Q5T871 98 aa6.26□□□□□ -1.41
CAPN3-219ENST00000569136 FAM74A4Q5TZK3 123 aa6.26□□□□□ -1.41
CAPN3-219ENST00000569136 TEX261Q6UWH6 196 aa6.26□□□□□ -1.41
CAPN3-219ENST00000569136 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.26□□□□□ -1.41
CAPN3-219ENST00000569136 FER1L6-AS1Q8NA97 138 aa6.26□□□□□ -1.41
CAPN3-219ENST00000569136 SMDT1Q9H4I9 107 aa6.26□□□□□ -1.41
CAPN3-219ENST00000569136 BIRC6Q9NR09 4857 aa6.25□□□□□ -1.41
CAPN3-219ENST00000569136 GAGE12JA6NER3 117 aa6.25□□□□□ -1.41
CAPN3-219ENST00000569136 TNFRSF6BO95407 300 aa6.25□□□□□ -1.41
CAPN3-219ENST00000569136 RPL36AP83881 106 aaKnown RBP6.25□□□□□ -1.41
CAPN3-219ENST00000569136 IFITM2Q01629 132 aa6.25□□□□□ -1.41
CAPN3-219ENST00000569136 GAGE1Q13065 139 aa6.25□□□□□ -1.41
CAPN3-219ENST00000569136 GAGE4Q13068 117 aa6.25□□□□□ -1.41
CAPN3-219ENST00000569136 GAGE5Q13069 117 aa6.25□□□□□ -1.41
CAPN3-219ENST00000569136 OR10J3Q5JRS4 329 aa6.25□□□□□ -1.41
CAPN3-219ENST00000569136 OR10AG1Q8NH19 301 aa6.25□□□□□ -1.41
CAPN3-219ENST00000569136 RPL36ALQ969Q0 106 aaKnown RBP6.25□□□□□ -1.41
CAPN3-219ENST00000569136 TRBV20OR9-2A0A075B6H5 130 aa6.24□□□□□ -1.41
CAPN3-219ENST00000569136 TRBV7-3A0A075B6L6 115 aa6.24□□□□□ -1.41
CAPN3-219ENST00000569136 A0A1B0GVY2 172 aa6.24□□□□□ -1.41
CAPN3-219ENST00000569136 IGLC6P0CF74 106 aa6.24□□□□□ -1.41
CAPN3-219ENST00000569136 FAM74A3Q4VXF1 159 aa6.24□□□□□ -1.41
CAPN3-219ENST00000569136 LINC01556Q5JQF7 62 aa6.24□□□□□ -1.41
CAPN3-219ENST00000569136 C14orf178Q8N769 122 aaPredicted RBP6.24□□□□□ -1.41
CAPN3-219ENST00000569136 OR10G8Q8NGN5 311 aa6.24□□□□□ -1.41
CAPN3-219ENST00000569136 TPPP3Q9BW30 176 aa6.24□□□□□ -1.41
CAPN3-219ENST00000569136 EPPK1P58107 5090 aaKnown RBP6.23□□□□□ -1.41
CAPN3-219ENST00000569136 A8MWL6 223 aa6.23□□□□□ -1.41
CAPN3-219ENST00000569136 TRGC1P0CF51 173 aa6.23□□□□□ -1.41
CAPN3-219ENST00000569136 PEA15Q15121 130 aa6.23□□□□□ -1.41
CAPN3-219ENST00000569136 LYZL1Q6UWQ5 148 aa6.23□□□□□ -1.41
CAPN3-219ENST00000569136 FAM231DQ6ZW35 169 aa6.23□□□□□ -1.41
CAPN3-219ENST00000569136 AP1S3Q96PC3 154 aa6.23□□□□□ -1.41
CAPN3-219ENST00000569136 SMIM7Q9BQ49 75 aa6.23□□□□□ -1.41
CAPN3-219ENST00000569136 KRTAP1-5Q9BYS1 174 aa6.23□□□□□ -1.41
CAPN3-219ENST00000569136 RPP21Q9H633 154 aaKnown RBP6.23□□□□□ -1.41
CAPN3-219ENST00000569136 MSRB1Q9NZV6 116 aa6.23□□□□□ -1.41
CAPN3-219ENST00000569136 MUC21A0A0G2JKD1 596 aa6.22□□□□□ -1.41
CAPN3-219ENST00000569136 MUC21A0A140T8X8 626 aa6.22□□□□□ -1.41
CAPN3-219ENST00000569136 ZNF727A8MUV8 499 aa6.22□□□□□ -1.41
CAPN3-219ENST00000569136 H7C1H1 209 aa6.22□□□□□ -1.41
CAPN3-219ENST00000569136 K7EN84 100 aa6.22□□□□□ -1.41
CAPN3-219ENST00000569136 GATCO43716 136 aaKnown RBP6.22□□□□□ -1.41
CAPN3-219ENST00000569136 SRP19P09132 144 aaKnown RBP6.22□□□□□ -1.41
CAPN3-219ENST00000569136 LINC00694P0DN24 101 aa6.22□□□□□ -1.41
CAPN3-219ENST00000569136 GZMBP10144 247 aa6.22□□□□□ -1.41
CAPN3-219ENST00000569136 NTF3P20783 257 aa6.22□□□□□ -1.41
CAPN3-219ENST00000569136 CEBPGP53567 150 aa6.22□□□□□ -1.41
CAPN3-219ENST00000569136 FOXA3P55318 350 aaPredicted RBP6.22□□□□□ -1.41
CAPN3-219ENST00000569136 LINC00315P59091 139 aa6.22□□□□□ -1.41
CAPN3-219ENST00000569136 ERVFC1-1P60608 527 aa6.22□□□□□ -1.41
CAPN3-219ENST00000569136 SSTP61278 116 aa6.22□□□□□ -1.41
CAPN3-219ENST00000569136 TMEM241Q24JQ0 296 aa6.22□□□□□ -1.41
CAPN3-219ENST00000569136 TMEM97Q5BJF2 176 aa6.22□□□□□ -1.41
CAPN3-219ENST00000569136 WFDC10BQ8IUB3 73 aa6.22□□□□□ -1.41
CAPN3-219ENST00000569136 DNAJC30Q96LL9 226 aa6.22□□□□□ -1.41
CAPN3-219ENST00000569136 CNFNQ9BYD5 112 aa6.22□□□□□ -1.41
CAPN3-219ENST00000569136 KIF25-AS1Q9Y6Z4 181 aa6.22□□□□□ -1.41
CAPN3-219ENST00000569136 DNAH17Q9UFH2 4485 aa6.22□□□□□ -1.41
CAPN3-219ENST00000569136 FRAS1Q86XX4 4008 aa6.22□□□□□ -1.41
CAPN3-219ENST00000569136 FAM231BA6NCW3 169 aa6.21□□□□□ -1.42
CAPN3-219ENST00000569136 IBA57-AS1B1ANH7 110 aa6.21□□□□□ -1.42
CAPN3-219ENST00000569136 UBE2D3P61077 147 aa6.21□□□□□ -1.42
CAPN3-219ENST00000569136 RAB14P61106 215 aa6.21□□□□□ -1.42
CAPN3-219ENST00000569136 PKIAP61925 76 aa6.21□□□□□ -1.42
CAPN3-219ENST00000569136 UBE2D2P62837 147 aa6.21□□□□□ -1.42
CAPN3-219ENST00000569136 TWIST1Q15672 202 aa6.21□□□□□ -1.42
CAPN3-219ENST00000569136 ZNF56Q15929 161 aa6.21□□□□□ -1.42
CAPN3-219ENST00000569136 KCNIP4Q6PIL6 250 aa6.21□□□□□ -1.42
CAPN3-219ENST00000569136 SMIM15Q7Z3B0 74 aa6.21□□□□□ -1.42
CAPN3-219ENST00000569136 DAZ4Q86SG3 579 aaKnown RBP6.21□□□□□ -1.42
CAPN3-219ENST00000569136 FRZBQ92765 325 aa6.21□□□□□ -1.42
CAPN3-219ENST00000569136 RNASE7Q9H1E1 156 aaKnown RBP6.21□□□□□ -1.42
CAPN3-219ENST00000569136 DAZ3Q9NR90 486 aaKnown RBP6.21□□□□□ -1.42
CAPN3-219ENST00000569136 Q9UF83 564 aa6.21□□□□□ -1.42
CAPN3-219ENST00000569136 TNFRSF18Q9Y5U5 241 aa6.21□□□□□ -1.42
CAPN3-219ENST00000569136 LOC105371267A0A1B0GV96 52 aa6.2□□□□□ -1.42
CAPN3-219ENST00000569136 CTRLP40313 264 aa6.2□□□□□ -1.42
CAPN3-219ENST00000569136 ELOBQ15370 118 aa6.2□□□□□ -1.42
CAPN3-219ENST00000569136 LINC01551Q86U37 167 aa6.2□□□□□ -1.42
CAPN3-219ENST00000569136 C15orf54Q8N8G6 183 aa6.2□□□□□ -1.42
CAPN3-219ENST00000569136 CHCHD7Q9BUK0 85 aa6.2□□□□□ -1.42
CAPN3-219ENST00000569136 TM2D2Q9BX73 214 aa6.2□□□□□ -1.42
CAPN3-219ENST00000569136 GFRA4Q9GZZ7 299 aa6.2□□□□□ -1.42
CAPN3-219ENST00000569136 DPH3P1Q9H4G8 78 aa6.2□□□□□ -1.42
CAPN3-219ENST00000569136 OSTCQ9NRP0 149 aa6.2□□□□□ -1.42
CAPN3-219ENST00000569136 URGCP-MRPS24S4R325 110 aa6.2□□□□□ -1.42
CAPN3-219ENST00000569136 DNAH2Q9P225 4427 aa6.19□□□□□ -1.42
CAPN3-219ENST00000569136 TRAV8-3A0A0A6YYJ7 113 aa6.19□□□□□ -1.42
CAPN3-219ENST00000569136 M0QY20 66 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms