RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 OR10J3Q5JRS4 329 aa12.43□□□□□ -0.42
SYNGR3-205ENST00000568896 NEXN-AS1Q8NBZ9 246 aa12.43□□□□□ -0.42
SYNGR3-205ENST00000568896 RPL36ALQ969Q0 106 aaKnown RBP12.43□□□□□ -0.42
SYNGR3-205ENST00000568896 TRBV7-3A0A075B6L6 115 aa12.42□□□□□ -0.42
SYNGR3-205ENST00000568896 TRAV8-6A0A0B4J262 113 aa12.42□□□□□ -0.42
SYNGR3-205ENST00000568896 UBE2D3P61077 147 aa12.42□□□□□ -0.42
SYNGR3-205ENST00000568896 UBE2D2P62837 147 aa12.42□□□□□ -0.42
SYNGR3-205ENST00000568896 ADIRFQ15847 76 aa12.42□□□□□ -0.42
SYNGR3-205ENST00000568896 CLLU1Q5K131 121 aa12.42□□□□□ -0.42
SYNGR3-205ENST00000568896 OR10G8Q8NGN5 311 aa12.42□□□□□ -0.42
SYNGR3-205ENST00000568896 IGHV3-38A0A0C4DH36 116 aa12.41□□□□□ -0.42
SYNGR3-205ENST00000568896 TWIST1Q15672 202 aa12.41□□□□□ -0.42
SYNGR3-205ENST00000568896 C15orf54Q8N8G6 183 aa12.41□□□□□ -0.42
SYNGR3-205ENST00000568896 TSKUQ8WUA8 353 aa12.41□□□□□ -0.42
SYNGR3-205ENST00000568896 PGLYRP4Q96LB8 373 aa12.41□□□□□ -0.42
SYNGR3-205ENST00000568896 DPH3P1Q9H4G8 78 aa12.41□□□□□ -0.42
SYNGR3-205ENST00000568896 V9GYV3 84 aa12.41□□□□□ -0.42
SYNGR3-205ENST00000568896 HERC1Q15751 4861 aa12.4□□□□□ -0.42
SYNGR3-205ENST00000568896 BTF3P20290 206 aaKnown RBP12.4□□□□□ -0.42
SYNGR3-205ENST00000568896 FOXA3P55318 350 aaPredicted RBP12.4□□□□□ -0.42
SYNGR3-205ENST00000568896 SUMO4Q6EEV6 95 aa12.4□□□□□ -0.42
SYNGR3-205ENST00000568896 SPATA12Q7Z6I5 190 aa12.4□□□□□ -0.42
SYNGR3-205ENST00000568896 TRAV9-2A0A087WT02 112 aa12.39□□□□□ -0.43
SYNGR3-205ENST00000568896 A0A087WWC5 75 aa12.39□□□□□ -0.43
SYNGR3-205ENST00000568896 K7EP13 123 aa12.39□□□□□ -0.43
SYNGR3-205ENST00000568896 LINC01556Q5JQF7 62 aa12.39□□□□□ -0.43
SYNGR3-205ENST00000568896 GFRA4Q9GZZ7 299 aa12.39□□□□□ -0.43
SYNGR3-205ENST00000568896 FAM231BA6NCW3 169 aa12.38□□□□□ -0.43
SYNGR3-205ENST00000568896 HIGD1CA8MV81 97 aa12.38□□□□□ -0.43
SYNGR3-205ENST00000568896 M0QY20 66 aa12.38□□□□□ -0.43
SYNGR3-205ENST00000568896 Q8N1X5 172 aa12.38□□□□□ -0.43
SYNGR3-205ENST00000568896 H7C1H1 209 aa12.37□□□□□ -0.43
SYNGR3-205ENST00000568896 KRTAP10-2P60368 255 aa12.37□□□□□ -0.43
SYNGR3-205ENST00000568896 FAT1Q14517 4588 aa12.37□□□□□ -0.43
SYNGR3-205ENST00000568896 Q6ZRN7 208 aaPredicted RBP12.36□□□□□ -0.43
SYNGR3-205ENST00000568896 C10orf126Q8N4M7 172 aa12.36□□□□□ -0.43
SYNGR3-205ENST00000568896 BORCS7Q96B45 105 aa12.36□□□□□ -0.43
SYNGR3-205ENST00000568896 TNFRSF18Q9Y5U5 241 aa12.36□□□□□ -0.43
SYNGR3-205ENST00000568896 A0A1B0GUT8 65 aa12.35□□□□□ -0.43
SYNGR3-205ENST00000568896 IGHV3-30P01768 117 aa12.35□□□□□ -0.43
SYNGR3-205ENST00000568896 IGHV3-33P01772 117 aa12.35□□□□□ -0.43
SYNGR3-205ENST00000568896 IGHV3-30-3P0DP02 117 aa12.35□□□□□ -0.43
SYNGR3-205ENST00000568896 IGHV3-30-5P0DP03 117 aa12.35□□□□□ -0.43
SYNGR3-205ENST00000568896 RASL11AQ6T310 242 aa12.35□□□□□ -0.43
SYNGR3-205ENST00000568896 SMIM15Q7Z3B0 74 aa12.35□□□□□ -0.43
SYNGR3-205ENST00000568896 Q8N3U1 123 aa12.35□□□□□ -0.43
SYNGR3-205ENST00000568896 DNAJC30Q96LL9 226 aa12.34□□□□□ -0.43
SYNGR3-205ENST00000568896 NUP35Q8NFH5 326 aa12.33□□□□□ -0.44
SYNGR3-205ENST00000568896 TRBV6-8A0A0A6YYG3 113 aa12.32□□□□□ -0.44
SYNGR3-205ENST00000568896 DAZ4Q86SG3 579 aaKnown RBP12.32□□□□□ -0.44
SYNGR3-205ENST00000568896 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.32□□□□□ -0.44
SYNGR3-205ENST00000568896 GATD1Q8NB37 220 aa12.32□□□□□ -0.44
SYNGR3-205ENST00000568896 NIT2Q9NQR4 276 aa12.32□□□□□ -0.44
SYNGR3-205ENST00000568896 DAZ3Q9NR90 486 aaKnown RBP12.32□□□□□ -0.44
SYNGR3-205ENST00000568896 TRAV26-2A0A0B4J265 109 aa12.31□□□□□ -0.44
SYNGR3-205ENST00000568896 SMIM27A0A1W2PRY6 76 aa12.31□□□□□ -0.44
SYNGR3-205ENST00000568896 IBA57-AS1B1ANH7 110 aa12.31□□□□□ -0.44
SYNGR3-205ENST00000568896 NFE4Q86UQ8 179 aa12.31□□□□□ -0.44
SYNGR3-205ENST00000568896 NIT1Q86X76 327 aa12.31□□□□□ -0.44
SYNGR3-205ENST00000568896 NAT8BQ9UHF3 227 aa12.31□□□□□ -0.44
SYNGR3-205ENST00000568896 NTM-AS1Q6ZSK4 140 aa12.3□□□□□ -0.44
SYNGR3-205ENST00000568896 PNRC1Q12796 327 aaPredicted RBP12.29□□□□□ -0.44
SYNGR3-205ENST00000568896 RIGQ13278 110 aa12.29□□□□□ -0.44
SYNGR3-205ENST00000568896 TMEM97Q5BJF2 176 aa12.29□□□□□ -0.44
SYNGR3-205ENST00000568896 TMEM191AQ9H0A3 160 aa12.29□□□□□ -0.44
SYNGR3-205ENST00000568896 FUSP35637 526 aaKnown RBP eCLIP12.28□□□□□ -0.44
SYNGR3-205ENST00000568896 LAGE3Q14657 143 aa12.28□□□□□ -0.44
SYNGR3-205ENST00000568896 UQCC3Q6UW78 93 aa12.28□□□□□ -0.44
SYNGR3-205ENST00000568896 FRZBQ92765 325 aa12.28□□□□□ -0.44
SYNGR3-205ENST00000568896 URGCP-MRPS24S4R325 110 aa12.28□□□□□ -0.44
SYNGR3-205ENST00000568896 RPL39LQ96EH5 51 aaKnown RBP12.27□□□□□ -0.45
SYNGR3-205ENST00000568896 CHCHD7Q9BUK0 85 aa12.27□□□□□ -0.45
SYNGR3-205ENST00000568896 Q9HAA7 133 aa12.27□□□□□ -0.45
SYNGR3-205ENST00000568896 A0A087WX48 190 aa12.26□□□□□ -0.45
SYNGR3-205ENST00000568896 RNF185Q96GF1 192 aa12.26□□□□□ -0.45
SYNGR3-205ENST00000568896 CHCHD5Q9BSY4 110 aa12.26□□□□□ -0.45
SYNGR3-205ENST00000568896 PPP1R2P9O14990 202 aa12.25□□□□□ -0.45
SYNGR3-205ENST00000568896 ADCYAP1P18509 176 aa12.25□□□□□ -0.45
SYNGR3-205ENST00000568896 IQCJQ1A5X6 159 aa12.25□□□□□ -0.45
SYNGR3-205ENST00000568896 KCNIP4Q6PIL6 250 aa12.25□□□□□ -0.45
SYNGR3-205ENST00000568896 AMN1Q8IY45 258 aa12.25□□□□□ -0.45
SYNGR3-205ENST00000568896 TRBV25-1A0A075B6N4 114 aa12.24□□□□□ -0.45
SYNGR3-205ENST00000568896 IGHV1-24A0A0C4DH33 117 aa12.24□□□□□ -0.45
SYNGR3-205ENST00000568896 TMEM218A2RU14 115 aa12.24□□□□□ -0.45
SYNGR3-205ENST00000568896 TMEM262E9PQX1 116 aa12.24□□□□□ -0.45
SYNGR3-205ENST00000568896 GAS8-AS1O95177 125 aa12.24□□□□□ -0.45
SYNGR3-205ENST00000568896 RAB4AP20338 218 aa12.24□□□□□ -0.45
SYNGR3-205ENST00000568896 COMMD7Q86VX2 200 aa12.24□□□□□ -0.45
SYNGR3-205ENST00000568896 MPV17L2Q567V2 206 aa12.23□□□□□ -0.45
SYNGR3-205ENST00000568896 DEFB104AQ8WTQ1 72 aa12.23□□□□□ -0.45
SYNGR3-205ENST00000568896 KLK12Q9UKR0 248 aa12.23□□□□□ -0.45
SYNGR3-205ENST00000568896 A0A1B0GW15 77 aa12.22□□□□□ -0.45
SYNGR3-205ENST00000568896 MT-ND4LP03901 98 aa12.22□□□□□ -0.45
SYNGR3-205ENST00000568896 CAMPP49913 170 aa12.22□□□□□ -0.45
SYNGR3-205ENST00000568896 PKIAP61925 76 aa12.22□□□□□ -0.45
SYNGR3-205ENST00000568896 COTL1Q14019 142 aa12.22□□□□□ -0.45
SYNGR3-205ENST00000568896 MRPL54Q6P161 138 aaKnown RBP12.22□□□□□ -0.45
SYNGR3-205ENST00000568896 MRAP2Q96G30 205 aa12.22□□□□□ -0.45
SYNGR3-205ENST00000568896 TRAV8-3A0A0A6YYJ7 113 aa12.21□□□□□ -0.45
SYNGR3-205ENST00000568896 TRBV6-5A0A0K0K1A5 114 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms