RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 FER1L6-AS1Q8NA97 138 aa6.5□□□□□ -1.37
CAPN3-216ENST00000567071 TSKUQ8WUA8 353 aa6.5□□□□□ -1.37
CAPN3-216ENST00000567071 PGLYRP4Q96LB8 373 aa6.5□□□□□ -1.37
CAPN3-216ENST00000567071 URGCP-MRPS24S4R325 110 aa6.5□□□□□ -1.37
CAPN3-216ENST00000567071 SMIM27A0A1W2PRY6 76 aa6.49□□□□□ -1.37
CAPN3-216ENST00000567071 HIGD1CA8MV81 97 aa6.49□□□□□ -1.37
CAPN3-216ENST00000567071 SPINK4O60575 86 aa6.49□□□□□ -1.37
CAPN3-216ENST00000567071 IGLC6P0CF74 106 aa6.49□□□□□ -1.37
CAPN3-216ENST00000567071 RNASE3P12724 160 aaKnown RBP6.49□□□□□ -1.37
CAPN3-216ENST00000567071 EVI2AP22794 236 aa6.49□□□□□ -1.37
CAPN3-216ENST00000567071 ZNF415Q09FC8 603 aa6.49□□□□□ -1.37
CAPN3-216ENST00000567071 LINC00467Q9BRT7 94 aa6.49□□□□□ -1.37
CAPN3-216ENST00000567071 DPH3P1Q9H4G8 78 aa6.49□□□□□ -1.37
CAPN3-216ENST00000567071 GSN-AS1Q9NRJ2 163 aa6.49□□□□□ -1.37
CAPN3-216ENST00000567071 TMEM242Q9NWH2 141 aa6.49□□□□□ -1.37
CAPN3-216ENST00000567071 CXCL1P09341 107 aa6.48□□□□□ -1.37
CAPN3-216ENST00000567071 ARMS2P0C7Q2 107 aa6.48□□□□□ -1.37
CAPN3-216ENST00000567071 S100PP25815 95 aa6.48□□□□□ -1.37
CAPN3-216ENST00000567071 CTRLP40313 264 aa6.48□□□□□ -1.37
CAPN3-216ENST00000567071 MRPL54Q6P161 138 aaKnown RBP6.48□□□□□ -1.37
CAPN3-216ENST00000567071 KCNIP4Q6PIL6 250 aa6.48□□□□□ -1.37
CAPN3-216ENST00000567071 LYZL1Q6UWQ5 148 aa6.48□□□□□ -1.37
CAPN3-216ENST00000567071 C11orf72Q8NBR9 251 aa6.48□□□□□ -1.37
CAPN3-216ENST00000567071 NUP35Q8NFH5 326 aa6.48□□□□□ -1.37
CAPN3-216ENST00000567071 OR10AG1Q8NH19 301 aa6.48□□□□□ -1.37
CAPN3-216ENST00000567071 RNASE8Q8TDE3 154 aaKnown RBP6.48□□□□□ -1.37
CAPN3-216ENST00000567071 TMEM263Q8WUH6 116 aaKnown RBP6.48□□□□□ -1.37
CAPN3-216ENST00000567071 GFRA4Q9GZZ7 299 aa6.48□□□□□ -1.37
CAPN3-216ENST00000567071 SMCO4Q9NRQ5 59 aa6.48□□□□□ -1.37
CAPN3-216ENST00000567071 NAT8BQ9UHF3 227 aa6.48□□□□□ -1.37
CAPN3-216ENST00000567071 SNURFLB1AK76 121 aa6.47□□□□□ -1.37
CAPN3-216ENST00000567071 M0R381 172 aa6.47□□□□□ -1.37
CAPN3-216ENST00000567071 GHRHP01286 108 aa6.47□□□□□ -1.37
CAPN3-216ENST00000567071 DNLZQ5SXM8 178 aa6.47□□□□□ -1.37
CAPN3-216ENST00000567071 Q6ZRU5 148 aa6.47□□□□□ -1.37
CAPN3-216ENST00000567071 BORCS7Q96B45 105 aa6.47□□□□□ -1.37
CAPN3-216ENST00000567071 C16orf74Q96GX8 76 aa6.47□□□□□ -1.37
CAPN3-216ENST00000567071 C9orf85Q96MD7 179 aa6.47□□□□□ -1.37
CAPN3-216ENST00000567071 IMMP2LQ96T52 175 aa6.47□□□□□ -1.37
CAPN3-216ENST00000567071 CHAC1Q9BUX1 264 aa6.47□□□□□ -1.37
CAPN3-216ENST00000567071 PHLDA3Q9Y5J5 127 aa6.47□□□□□ -1.37
CAPN3-216ENST00000567071 TGIF2-C20orf24A0A0A6YYL0 155 aa6.46□□□□□ -1.38
CAPN3-216ENST00000567071 LRCOL1A6NCL2 159 aa6.46□□□□□ -1.38
CAPN3-216ENST00000567071 FAM231BA6NCW3 169 aa6.46□□□□□ -1.38
CAPN3-216ENST00000567071 SNAI2O43623 268 aa6.46□□□□□ -1.38
CAPN3-216ENST00000567071 OR5AL1P0C617 328 aa6.46□□□□□ -1.38
CAPN3-216ENST00000567071 ELOBQ15370 118 aa6.46□□□□□ -1.38
CAPN3-216ENST00000567071 ZNF493Q6ZR52 646 aa6.46□□□□□ -1.38
CAPN3-216ENST00000567071 C10orf126Q8N4M7 172 aa6.46□□□□□ -1.38
CAPN3-216ENST00000567071 MRPL16Q9NX20 251 aaKnown RBP6.46□□□□□ -1.38
CAPN3-216ENST00000567071 A0A096LPF7 62 aa6.45□□□□□ -1.38
CAPN3-216ENST00000567071 A0A1B0GUT8 65 aa6.45□□□□□ -1.38
CAPN3-216ENST00000567071 PLAC8L1A1L4L8 177 aa6.45□□□□□ -1.38
CAPN3-216ENST00000567071 F2Z2F3 143 aa6.45□□□□□ -1.38
CAPN3-216ENST00000567071 SPANXN1Q5VSR9 72 aa6.45□□□□□ -1.38
CAPN3-216ENST00000567071 ZFP82Q8N141 532 aa6.45□□□□□ -1.38
CAPN3-216ENST00000567071 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.45□□□□□ -1.38
CAPN3-216ENST00000567071 BTF3L4Q96K17 158 aa6.45□□□□□ -1.38
CAPN3-216ENST00000567071 NOP10Q9NPE3 64 aaKnown RBP6.45□□□□□ -1.38
CAPN3-216ENST00000567071 TRAV9-1A0A075B6T8 112 aa6.44□□□□□ -1.38
CAPN3-216ENST00000567071 TRGV1A0A0A0MS02 117 aa6.44□□□□□ -1.38
CAPN3-216ENST00000567071 HOXA5P20719 270 aa6.44□□□□□ -1.38
CAPN3-216ENST00000567071 CAMPP49913 170 aa6.44□□□□□ -1.38
CAPN3-216ENST00000567071 HNRNPA3P51991 378 aaKnown RBP6.44□□□□□ -1.38
CAPN3-216ENST00000567071 FOXA3P55318 350 aaPredicted RBP6.44□□□□□ -1.38
CAPN3-216ENST00000567071 CACNG7P62955 275 aa6.44□□□□□ -1.38
CAPN3-216ENST00000567071 RIGQ13278 110 aa6.44□□□□□ -1.38
CAPN3-216ENST00000567071 TWIST1Q15672 202 aa6.44□□□□□ -1.38
CAPN3-216ENST00000567071 ZNF876PQ49A33 203 aa6.44□□□□□ -1.38
CAPN3-216ENST00000567071 Q6ZTI0 123 aa6.44□□□□□ -1.38
CAPN3-216ENST00000567071 YPEL4Q96NS1 127 aa6.44□□□□□ -1.38
CAPN3-216ENST00000567071 A0A1B0GXF2 115 aa6.43□□□□□ -1.38
CAPN3-216ENST00000567071 M0R2P5 195 aa6.43□□□□□ -1.38
CAPN3-216ENST00000567071 NTF3P20783 257 aa6.43□□□□□ -1.38
CAPN3-216ENST00000567071 RAB4BP61018 213 aa6.43□□□□□ -1.38
CAPN3-216ENST00000567071 ATP5L2Q7Z4Y8 100 aa6.43□□□□□ -1.38
CAPN3-216ENST00000567071 CIRBP-AS1Q8TBR5 109 aa6.43□□□□□ -1.38
CAPN3-216ENST00000567071 SPXQ9BT56 116 aa6.43□□□□□ -1.38
CAPN3-216ENST00000567071 CNFNQ9BYD5 112 aa6.43□□□□□ -1.38
CAPN3-216ENST00000567071 ICOSQ9Y6W8 199 aa6.43□□□□□ -1.38
CAPN3-216ENST00000567071 TRBV24-1A0A075B6N3 115 aa6.42□□□□□ -1.38
CAPN3-216ENST00000567071 GAGE12BA1L429 117 aa6.42□□□□□ -1.38
CAPN3-216ENST00000567071 GAGE7O76087 117 aa6.42□□□□□ -1.38
CAPN3-216ENST00000567071 CRYGDP07320 174 aa6.42□□□□□ -1.38
CAPN3-216ENST00000567071 GAGE12FP0CL80 117 aa6.42□□□□□ -1.38
CAPN3-216ENST00000567071 GAGE12GP0CL81 117 aa6.42□□□□□ -1.38
CAPN3-216ENST00000567071 GAGE12IP0CL82 117 aa6.42□□□□□ -1.38
CAPN3-216ENST00000567071 HBBP68871 147 aa6.42□□□□□ -1.38
CAPN3-216ENST00000567071 DAZ2Q13117 558 aaKnown RBP6.42□□□□□ -1.38
CAPN3-216ENST00000567071 AP1S3Q96PC3 154 aa6.42□□□□□ -1.38
CAPN3-216ENST00000567071 JPT2Q9H910 190 aa6.42□□□□□ -1.38
CAPN3-216ENST00000567071 CRCT1Q9UGL9 99 aa6.42□□□□□ -1.38
CAPN3-216ENST00000567071 A0A087WWL8 130 aa6.41□□□□□ -1.38
CAPN3-216ENST00000567071 COLCA2A8K830 154 aa6.41□□□□□ -1.38
CAPN3-216ENST00000567071 IGHV3-53P01767 116 aa6.41□□□□□ -1.38
CAPN3-216ENST00000567071 MGPP08493 103 aa6.41□□□□□ -1.38
CAPN3-216ENST00000567071 TRGC1P0CF51 173 aa6.41□□□□□ -1.38
CAPN3-216ENST00000567071 FAM74A4Q5TZK3 123 aa6.41□□□□□ -1.38
CAPN3-216ENST00000567071 WDR73Q6P4I2 378 aa6.41□□□□□ -1.38
CAPN3-216ENST00000567071 C14orf178Q8N769 122 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms