RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 FAM231CP0DMU5 169 aa18■□□□□ 0.47
NME3-208ENST00000565379 FAT2Q9NYQ8 4349 aa18■□□□□ 0.47
NME3-208ENST00000565379 MRPL54Q6P161 138 aaKnown RBP17.99■□□□□ 0.47
NME3-208ENST00000565379 NEGR1Q7Z3B1 354 aa17.99■□□□□ 0.47
NME3-208ENST00000565379 CAMPP49913 170 aa17.98■□□□□ 0.47
NME3-208ENST00000565379 RASL11AQ6T310 242 aa17.98■□□□□ 0.47
NME3-208ENST00000565379 GATD1Q8NB37 220 aa17.98■□□□□ 0.47
NME3-208ENST00000565379 RPL36AP83881 106 aaKnown RBP17.97■□□□□ 0.47
NME3-208ENST00000565379 SUMO4Q6EEV6 95 aa17.97■□□□□ 0.47
NME3-208ENST00000565379 RPL36ALQ969Q0 106 aaKnown RBP17.97■□□□□ 0.47
NME3-208ENST00000565379 DNAJC30Q96LL9 226 aa17.97■□□□□ 0.47
NME3-208ENST00000565379 LOC100131303A0A0U1RQF7 123 aa17.96■□□□□ 0.47
NME3-208ENST00000565379 M0QY20 66 aa17.96■□□□□ 0.47
NME3-208ENST00000565379 CCL18P55774 89 aa17.96■□□□□ 0.47
NME3-208ENST00000565379 MRAP2Q96G30 205 aa17.95■□□□□ 0.46
NME3-208ENST00000565379 TRBV7-3A0A075B6L6 115 aa17.94■□□□□ 0.46
NME3-208ENST00000565379 LINC00694P0DN24 101 aa17.94■□□□□ 0.46
NME3-208ENST00000565379 RAB4AP20338 218 aa17.94■□□□□ 0.46
NME3-208ENST00000565379 GAGE12JA6NER3 117 aa17.93■□□□□ 0.46
NME3-208ENST00000565379 GAGE1Q13065 139 aa17.93■□□□□ 0.46
NME3-208ENST00000565379 GAGE4Q13068 117 aa17.93■□□□□ 0.46
NME3-208ENST00000565379 GAGE5Q13069 117 aa17.93■□□□□ 0.46
NME3-208ENST00000565379 GAGE13Q4V321 117 aa17.93■□□□□ 0.46
NME3-208ENST00000565379 FAM104BQ5XKR9 115 aa17.93■□□□□ 0.46
NME3-208ENST00000565379 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.93■□□□□ 0.46
NME3-208ENST00000565379 HERC2O95714 4834 aa17.92■□□□□ 0.46
NME3-208ENST00000565379 TIRAPP58753 221 aa17.92■□□□□ 0.46
NME3-208ENST00000565379 COX19Q49B96 90 aa17.92■□□□□ 0.46
NME3-208ENST00000565379 AMN1Q8IY45 258 aa17.92■□□□□ 0.46
NME3-208ENST00000565379 NEXN-AS1Q8NBZ9 246 aa17.92■□□□□ 0.46
NME3-208ENST00000565379 ATP6V0E2Q8NHE4 81 aa17.92■□□□□ 0.46
NME3-208ENST00000565379 ZNRF2Q8NHG8 242 aa17.92■□□□□ 0.46
NME3-208ENST00000565379 RNF185Q96GF1 192 aa17.92■□□□□ 0.46
NME3-208ENST00000565379 NIT2Q9NQR4 276 aa17.92■□□□□ 0.46
NME3-208ENST00000565379 TNFRSF18Q9Y5U5 241 aa17.92■□□□□ 0.46
NME3-208ENST00000565379 URGCP-MRPS24S4R325 110 aa17.92■□□□□ 0.46
NME3-208ENST00000565379 PPP1R17O96001 155 aa17.91■□□□□ 0.46
NME3-208ENST00000565379 UBE2DNLQ8IWF7 75 aa17.9■□□□□ 0.46
NME3-208ENST00000565379 UBE2D3P61077 147 aa17.89■□□□□ 0.45
NME3-208ENST00000565379 UBE2D2P62837 147 aa17.89■□□□□ 0.45
NME3-208ENST00000565379 ESRGQ1W209 222 aa17.89■□□□□ 0.45
NME3-208ENST00000565379 LYPD5Q6UWN5 251 aa17.89■□□□□ 0.45
NME3-208ENST00000565379 DAZ4Q86SG3 579 aaKnown RBP17.88■□□□□ 0.45
NME3-208ENST00000565379 GTSF1LQ9H1H1 148 aa17.88■□□□□ 0.45
NME3-208ENST00000565379 DAZ3Q9NR90 486 aaKnown RBP17.88■□□□□ 0.45
NME3-208ENST00000565379 Q9UF83 564 aa17.88■□□□□ 0.45
NME3-208ENST00000565379 TRAV26-2A0A0B4J265 109 aa17.87■□□□□ 0.45
NME3-208ENST00000565379 ATRAIDQ6UW56 229 aa17.87■□□□□ 0.45
NME3-208ENST00000565379 PPBPP02775 128 aa17.86■□□□□ 0.45
NME3-208ENST00000565379 MRPL51Q4U2R6 128 aaKnown RBP17.86■□□□□ 0.45
NME3-208ENST00000565379 SMCO4Q9NRQ5 59 aa17.86■□□□□ 0.45
NME3-208ENST00000565379 MRPS16Q9Y3D3 137 aaKnown RBP17.86■□□□□ 0.45
NME3-208ENST00000565379 LINC00588Q9Y4M8 146 aa17.86■□□□□ 0.45
NME3-208ENST00000565379 PKHD1P08F94 4074 aa17.85■□□□□ 0.45
NME3-208ENST00000565379 M0R2N4 97 aa17.85■□□□□ 0.45
NME3-208ENST00000565379 TMEM97Q5BJF2 176 aa17.85■□□□□ 0.45
NME3-208ENST00000565379 UPK3BQ9BT76 320 aa17.85■□□□□ 0.45
NME3-208ENST00000565379 TRBV24-1A0A075B6N3 115 aa17.84■□□□□ 0.45
NME3-208ENST00000565379 TRBV6-5A0A0K0K1A5 114 aa17.84■□□□□ 0.45
NME3-208ENST00000565379 ELOBQ15370 118 aa17.84■□□□□ 0.45
NME3-208ENST00000565379 OR10J3Q5JRS4 329 aa17.84■□□□□ 0.45
NME3-208ENST00000565379 DYNC1H1Q14204 4646 aaKnown RBP17.83■□□□□ 0.45
NME3-208ENST00000565379 HLA-DQA1P01909 254 aa17.83■□□□□ 0.44
NME3-208ENST00000565379 CKS2P33552 79 aa17.83■□□□□ 0.44
NME3-208ENST00000565379 TMEM136Q6ZRR5 245 aa17.83■□□□□ 0.44
NME3-208ENST00000565379 GNB1LQ9BYB4 327 aa17.83■□□□□ 0.44
NME3-208ENST00000565379 KIAA1109Q2LD37 5005 aa17.83■□□□□ 0.44
NME3-208ENST00000565379 LELP1Q5T871 98 aa17.82■□□□□ 0.44
NME3-208ENST00000565379 MT-ND6P03923 174 aa17.81■□□□□ 0.44
NME3-208ENST00000565379 RPL39LQ96EH5 51 aaKnown RBP17.81■□□□□ 0.44
NME3-208ENST00000565379 ST20Q9HBF5 79 aa17.81■□□□□ 0.44
NME3-208ENST00000565379 IGLV2-18A0A075B6J9 118 aa17.8■□□□□ 0.44
NME3-208ENST00000565379 ORMDL3Q8N138 153 aa17.8■□□□□ 0.44
NME3-208ENST00000565379 TRAV8-6A0A0B4J262 113 aa17.79■□□□□ 0.44
NME3-208ENST00000565379 PHOX2AO14813 284 aa17.79■□□□□ 0.44
NME3-208ENST00000565379 LINC00336Q6ZUF6 198 aa17.79■□□□□ 0.44
NME3-208ENST00000565379 LAMTOR2Q9Y2Q5 125 aa17.79■□□□□ 0.44
NME3-208ENST00000565379 TGIF2-C20orf24A0A0A6YYL0 155 aa17.78■□□□□ 0.44
NME3-208ENST00000565379 D6R8Y8 96 aa17.78■□□□□ 0.44
NME3-208ENST00000565379 S100A1P23297 94 aa17.78■□□□□ 0.44
NME3-208ENST00000565379 DNAH11Q96DT5 4516 aa17.77■□□□□ 0.44
NME3-208ENST00000565379 NCR2O95944 276 aa17.77■□□□□ 0.44
NME3-208ENST00000565379 NRACQ8N912 160 aa17.77■□□□□ 0.44
NME3-208ENST00000565379 C20orf78Q9BR46 151 aa17.77■□□□□ 0.44
NME3-208ENST00000565379 PKD1P98161 4303 aa17.76■□□□□ 0.43
NME3-208ENST00000565379 SDHAF1A6NFY7 115 aa17.76■□□□□ 0.43
NME3-208ENST00000565379 SMKR1H3BMG3 65 aa17.76■□□□□ 0.43
NME3-208ENST00000565379 RTL8CO15255 209 aa17.76■□□□□ 0.43
NME3-208ENST00000565379 GAS8-AS1O95177 125 aa17.76■□□□□ 0.43
NME3-208ENST00000565379 APCSP02743 223 aa17.76■□□□□ 0.43
NME3-208ENST00000565379 RPS10P46783 165 aaKnown RBP17.76■□□□□ 0.43
NME3-208ENST00000565379 YPEL4Q96NS1 127 aa17.76■□□□□ 0.43
NME3-208ENST00000565379 IGHV3-38A0A0C4DH36 116 aa17.75■□□□□ 0.43
NME3-208ENST00000565379 SUMO2P61956 95 aaKnown RBP17.75■□□□□ 0.43
NME3-208ENST00000565379 CBLN2Q8IUK8 224 aa17.75■□□□□ 0.43
NME3-208ENST00000565379 Q9H8V8 135 aa17.75■□□□□ 0.43
NME3-208ENST00000565379 TRBV6-8A0A0A6YYG3 113 aa17.74■□□□□ 0.43
NME3-208ENST00000565379 TNFRSF6BO95407 300 aa17.74■□□□□ 0.43
NME3-208ENST00000565379 RPL32P62910 135 aaKnown RBP17.74■□□□□ 0.43
NME3-208ENST00000565379 COTL1Q14019 142 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms