RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 MRC2Q9UBG0 1479 aa0.99□□□□□ -2.25
UBR1-205ENST00000564540 NOTCH1P46531 2555 aa0.99□□□□□ -2.25
UBR1-205ENST00000564540 TECTAO75443 2155 aa0.98□□□□□ -2.25
UBR1-205ENST00000564540 CCNB3Q8WWL7 1395 aa0.98□□□□□ -2.25
UBR1-205ENST00000564540 TRAV13-2A0A0B4J235 113 aa0.98□□□□□ -2.25
UBR1-205ENST00000564540 SIX6O95475 246 aa0.98□□□□□ -2.25
UBR1-205ENST00000564540 CCL3L1P16619 93 aa0.98□□□□□ -2.25
UBR1-205ENST00000564540 CAV3P56539 151 aa0.98□□□□□ -2.25
UBR1-205ENST00000564540 ELOF1P60002 83 aaKnown RBP0.98□□□□□ -2.25
UBR1-205ENST00000564540 ZNF818PQ6ZRF7 136 aa0.98□□□□□ -2.25
UBR1-205ENST00000564540 LINC00312Q9Y6C7 94 aa0.98□□□□□ -2.25
UBR1-205ENST00000564540 ZFYVE16Q7Z3T8 1539 aa0.98□□□□□ -2.25
UBR1-205ENST00000564540 AHNAK2Q8IVF2 5795 aa0.98□□□□□ -2.25
UBR1-205ENST00000564540 BLMP54132 1417 aaPredicted RBP0.98□□□□□ -2.25
UBR1-205ENST00000564540 CPSF1Q10570 1443 aaKnown RBP0.98□□□□□ -2.25
UBR1-205ENST00000564540 DLG5Q8TDM6 1919 aa0.97□□□□□ -2.25
UBR1-205ENST00000564540 NRKQ7Z2Y5 1582 aa0.97□□□□□ -2.25
UBR1-205ENST00000564540 AFDNP55196 1824 aaKnown RBP0.97□□□□□ -2.25
UBR1-205ENST00000564540 PIGBOS1A0A0B4J2F0 54 aa0.97□□□□□ -2.25
UBR1-205ENST00000564540 TRBV30A0A0K0K1B3 111 aa0.97□□□□□ -2.25
UBR1-205ENST00000564540 FAM24AA6NFZ4 105 aa0.97□□□□□ -2.25
UBR1-205ENST00000564540 FXYD1O00168 92 aa0.97□□□□□ -2.25
UBR1-205ENST00000564540 S100A8P05109 93 aa0.97□□□□□ -2.25
UBR1-205ENST00000564540 NCMAPQ5T1S8 102 aa0.97□□□□□ -2.25
UBR1-205ENST00000564540 ACBD7Q8N6N7 88 aa0.97□□□□□ -2.25
UBR1-205ENST00000564540 LINC00474Q9P2X8 69 aa0.97□□□□□ -2.25
UBR1-205ENST00000564540 MAPKBP1O60336 1514 aa0.97□□□□□ -2.25
UBR1-205ENST00000564540 CASKIN1Q8WXD9 1431 aa0.97□□□□□ -2.25
UBR1-205ENST00000564540 CNTLNQ9NXG0 1405 aa0.97□□□□□ -2.25
UBR1-205ENST00000564540 SNRNP200O75643 2136 aaKnown RBP0.97□□□□□ -2.25
UBR1-205ENST00000564540 SMARCA2P51531 1590 aa0.96□□□□□ -2.26
UBR1-205ENST00000564540 ARAP2Q8WZ64 1704 aa0.96□□□□□ -2.26
UBR1-205ENST00000564540 NRXN2Q9P2S2 1712 aa0.96□□□□□ -2.26
UBR1-205ENST00000564540 A0A087WTM6 91 aa0.96□□□□□ -2.26
UBR1-205ENST00000564540 A0A1W2PPM0 123 aa0.96□□□□□ -2.26
UBR1-205ENST00000564540 SSBP1Q04837 148 aaKnown RBP0.96□□□□□ -2.26
UBR1-205ENST00000564540 KLKP1Q107X0 134 aa0.96□□□□□ -2.26
UBR1-205ENST00000564540 LINC00575Q6W349 94 aa0.96□□□□□ -2.26
UBR1-205ENST00000564540 COMMD6Q7Z4G1 85 aa0.96□□□□□ -2.26
UBR1-205ENST00000564540 C4orf33Q8N1A6 199 aa0.96□□□□□ -2.26
UBR1-205ENST00000564540 TTC9CQ8N5M4 171 aa0.96□□□□□ -2.26
UBR1-205ENST00000564540 COX7B2Q8TF08 81 aa0.96□□□□□ -2.26
UBR1-205ENST00000564540 AQP10Q96PS8 301 aa0.96□□□□□ -2.26
UBR1-205ENST00000564540 BET1LQ9NYM9 111 aa0.96□□□□□ -2.26
UBR1-205ENST00000564540 VPS8Q8N3P4 1428 aa0.96□□□□□ -2.26
UBR1-205ENST00000564540 ABCA4P78363 2273 aa0.95□□□□□ -2.26
UBR1-205ENST00000564540 PHIPQ8WWQ0 1821 aa0.95□□□□□ -2.26
UBR1-205ENST00000564540 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.95□□□□□ -2.26
UBR1-205ENST00000564540 TRBV7-1A0A0A6YYK4 115 aa0.95□□□□□ -2.26
UBR1-205ENST00000564540 UBE2L5PA0A1B0GUS4 154 aa0.95□□□□□ -2.26
UBR1-205ENST00000564540 TMEM262E9PQX1 116 aa0.95□□□□□ -2.26
UBR1-205ENST00000564540 M0R143 59 aa0.95□□□□□ -2.26
UBR1-205ENST00000564540 SSSCA1O60232 199 aa0.95□□□□□ -2.26
UBR1-205ENST00000564540 MPC2O95563 127 aa0.95□□□□□ -2.26
UBR1-205ENST00000564540 S100A10P60903 97 aa0.95□□□□□ -2.26
UBR1-205ENST00000564540 UBE2L3P68036 154 aaKnown RBP0.95□□□□□ -2.26
UBR1-205ENST00000564540 C10orf99Q6UWK7 81 aa0.95□□□□□ -2.26
UBR1-205ENST00000564540 PATJQ8NI35 1801 aa0.94□□□□□ -2.26
UBR1-205ENST00000564540 ESPL1Q14674 2120 aa0.94□□□□□ -2.26
UBR1-205ENST00000564540 KDM6BO15054 1643 aa0.94□□□□□ -2.26
UBR1-205ENST00000564540 RBAKDNA6NC62 111 aa0.94□□□□□ -2.26
UBR1-205ENST00000564540 DCDP81605 110 aaKnown RBP0.94□□□□□ -2.26
UBR1-205ENST00000564540 C10orf128Q5T292 105 aa0.94□□□□□ -2.26
UBR1-205ENST00000564540 PLAC4Q8WY50 150 aa0.94□□□□□ -2.26
UBR1-205ENST00000564540 TSLPQ969D9 159 aa0.94□□□□□ -2.26
UBR1-205ENST00000564540 CYP4F30PQ9H0H9 118 aa0.94□□□□□ -2.26
UBR1-205ENST00000564540 C10orf71Q711Q0 1435 aa0.94□□□□□ -2.26
UBR1-205ENST00000564540 DOCK1Q14185 1865 aa0.94□□□□□ -2.26
UBR1-205ENST00000564540 PLXNA1Q9UIW2 1896 aa0.94□□□□□ -2.26
UBR1-205ENST00000564540 SPAG17Q6Q759 2223 aa0.93□□□□□ -2.26
UBR1-205ENST00000564540 SPTBP11277 2137 aa0.93□□□□□ -2.26
UBR1-205ENST00000564540 ATP5EP56381 51 aaPredicted RBP0.93□□□□□ -2.26
UBR1-205ENST00000564540 EDDM3BP56851 147 aa0.93□□□□□ -2.26
UBR1-205ENST00000564540 Q8N6K4 173 aa0.93□□□□□ -2.26
UBR1-205ENST00000564540 PPP1R1CQ8WVI7 109 aa0.93□□□□□ -2.26
UBR1-205ENST00000564540 TMEM14BQ9NUH8 114 aa0.93□□□□□ -2.26
UBR1-205ENST00000564540 V9GYV3 84 aa0.93□□□□□ -2.26
UBR1-205ENST00000564540 ABCC10Q5T3U5 1492 aa0.92□□□□□ -2.26
UBR1-205ENST00000564540 SPHKAPQ2M3C7 1700 aa0.92□□□□□ -2.26
UBR1-205ENST00000564540 NWD2Q9ULI1 1742 aa0.92□□□□□ -2.26
UBR1-205ENST00000564540 KIAA0100Q14667 2235 aaKnown RBP0.92□□□□□ -2.26
UBR1-205ENST00000564540 ARFGEF1Q9Y6D6 1849 aa0.92□□□□□ -2.26
UBR1-205ENST00000564540 PPIP5K1Q6PFW1 1433 aa0.92□□□□□ -2.26
UBR1-205ENST00000564540 SCAPERQ9BY12 1400 aa0.92□□□□□ -2.26
UBR1-205ENST00000564540 MYH8P13535 1937 aa0.92□□□□□ -2.26
UBR1-205ENST00000564540 MED12Q93074 2177 aa0.92□□□□□ -2.26
UBR1-205ENST00000564540 LY6G6CO95867 125 aa0.92□□□□□ -2.26
UBR1-205ENST00000564540 SNCAP37840 140 aa0.92□□□□□ -2.26
UBR1-205ENST00000564540 FAM74A4Q5TZK3 123 aa0.92□□□□□ -2.26
UBR1-205ENST00000564540 Q96NJ1 140 aa0.92□□□□□ -2.26
UBR1-205ENST00000564540 FBN2P35556 2912 aa0.92□□□□□ -2.26
UBR1-205ENST00000564540 PARP14Q460N5 1801 aa0.92□□□□□ -2.26
UBR1-205ENST00000564540 ASCC3Q8N3C0 2202 aaKnown RBP0.91□□□□□ -2.26
UBR1-205ENST00000564540 TRBV7-3A0A075B6L6 115 aa0.91□□□□□ -2.26
UBR1-205ENST00000564540 H3BQ15 152 aa0.91□□□□□ -2.26
UBR1-205ENST00000564540 PKIAP61925 76 aa0.91□□□□□ -2.26
UBR1-205ENST00000564540 PRB3Q04118 309 aaPredicted RBP0.91□□□□□ -2.26
UBR1-205ENST00000564540 MYOZ3Q8TDC0 251 aa0.91□□□□□ -2.26
UBR1-205ENST00000564540 SNHG12Q9BXW3 62 aa0.91□□□□□ -2.26
UBR1-205ENST00000564540 TNS1Q9HBL0 1735 aaKnown RBP0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms