RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 C20orf197Q8N268 126 aa2.53□□□□□ -2
GDE1-202ENST00000563645 ITLN2Q8WWU7 325 aaPredicted RBP2.53□□□□□ -2
GDE1-202ENST00000563645 CHCHD10Q8WYQ3 142 aaPredicted RBP2.53□□□□□ -2
GDE1-202ENST00000563645 NPCDR1Q9BY65 106 aa2.53□□□□□ -2
GDE1-202ENST00000563645 SLC25A22Q9H936 323 aa2.53□□□□□ -2
GDE1-202ENST00000563645 ZNF706Q9Y5V0 76 aaPredicted RBP2.53□□□□□ -2
GDE1-202ENST00000563645 LTBP2Q14767 1821 aa2.53□□□□□ -2
GDE1-202ENST00000563645 KIAA1549LQ6ZVL6 1849 aa2.53□□□□□ -2
GDE1-202ENST00000563645 TNS1Q9HBL0 1735 aaKnown RBP2.53□□□□□ -2
GDE1-202ENST00000563645 IGLV3-32A0A0A0MS00 114 aa2.52□□□□□ -2.01
GDE1-202ENST00000563645 A0A0G2JRQ6 117 aa2.52□□□□□ -2.01
GDE1-202ENST00000563645 TMEM30CPA0ZSE6 113 aa2.52□□□□□ -2.01
GDE1-202ENST00000563645 IGHV3-33P01772 117 aa2.52□□□□□ -2.01
GDE1-202ENST00000563645 IGKV1-16P04430 117 aa2.52□□□□□ -2.01
GDE1-202ENST00000563645 HMGN2P05204 90 aaKnown RBP2.52□□□□□ -2.01
GDE1-202ENST00000563645 PIRTP0C851 137 aa2.52□□□□□ -2.01
GDE1-202ENST00000563645 P0C879 139 aa2.52□□□□□ -2.01
GDE1-202ENST00000563645 SYCNQ0VAF6 134 aa2.52□□□□□ -2.01
GDE1-202ENST00000563645 FBXL19-AS1Q494R0 122 aa2.52□□□□□ -2.01
GDE1-202ENST00000563645 C2orf66Q6UXQ4 117 aa2.52□□□□□ -2.01
GDE1-202ENST00000563645 LINC01006Q8NI28 216 aa2.52□□□□□ -2.01
GDE1-202ENST00000563645 Q96M85 177 aa2.52□□□□□ -2.01
GDE1-202ENST00000563645 WFDC6Q9BQY6 131 aa2.52□□□□□ -2.01
GDE1-202ENST00000563645 PRO1854Q9UHT4 67 aa2.52□□□□□ -2.01
GDE1-202ENST00000563645 UBE2D4Q9Y2X8 147 aa2.52□□□□□ -2.01
GDE1-202ENST00000563645 PLXNB2O15031 1838 aa2.52□□□□□ -2.01
GDE1-202ENST00000563645 MYO9BQ13459 2157 aa2.51□□□□□ -2.01
GDE1-202ENST00000563645 IGLV3-9A0A075B6K5 115 aa2.51□□□□□ -2.01
GDE1-202ENST00000563645 TRBV30A0A0K0K1B3 111 aa2.51□□□□□ -2.01
GDE1-202ENST00000563645 TMEM223A0PJW6 202 aa2.51□□□□□ -2.01
GDE1-202ENST00000563645 TMEM14DPA8MWL7 114 aa2.51□□□□□ -2.01
GDE1-202ENST00000563645 F8WEM9 126 aa2.51□□□□□ -2.01
GDE1-202ENST00000563645 GNRH2O43555 120 aa2.51□□□□□ -2.01
GDE1-202ENST00000563645 PRM2P04554 102 aa2.51□□□□□ -2.01
GDE1-202ENST00000563645 HMGA1P17096 107 aaKnown RBP2.51□□□□□ -2.01
GDE1-202ENST00000563645 FGF12P61328 243 aa2.51□□□□□ -2.01
GDE1-202ENST00000563645 FXYD3Q14802 87 aa2.51□□□□□ -2.01
GDE1-202ENST00000563645 MRPL51Q4U2R6 128 aaKnown RBP2.51□□□□□ -2.01
GDE1-202ENST00000563645 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.51□□□□□ -2.01
GDE1-202ENST00000563645 SFTA2Q6UW10 78 aa2.51□□□□□ -2.01
GDE1-202ENST00000563645 DYNAPQ8N1N2 210 aa2.51□□□□□ -2.01
GDE1-202ENST00000563645 LINC00269Q8N2A0 174 aa2.51□□□□□ -2.01
GDE1-202ENST00000563645 PFN4Q8NHR9 129 aa2.51□□□□□ -2.01
GDE1-202ENST00000563645 CCL4L1Q8NHW4 92 aa2.51□□□□□ -2.01
GDE1-202ENST00000563645 LHFPL6Q9Y693 200 aa2.51□□□□□ -2.01
GDE1-202ENST00000563645 COL11A1P12107 1806 aaPredicted RBP2.51□□□□□ -2.01
GDE1-202ENST00000563645 PLXNA2O75051 1894 aa2.5□□□□□ -2.01
GDE1-202ENST00000563645 IGLV3-12A0A075B6K2 115 aa2.5□□□□□ -2.01
GDE1-202ENST00000563645 IGHV1-69DA0A0B4J2H0 117 aa2.5□□□□□ -2.01
GDE1-202ENST00000563645 C16orf90A8MZG2 172 aa2.5□□□□□ -2.01
GDE1-202ENST00000563645 CD28P10747 220 aa2.5□□□□□ -2.01
GDE1-202ENST00000563645 ZNF138P52744 262 aa2.5□□□□□ -2.01
GDE1-202ENST00000563645 PLGLAQ15195 96 aa2.5□□□□□ -2.01
GDE1-202ENST00000563645 FAM216BQ8N7L0 139 aa2.5□□□□□ -2.01
GDE1-202ENST00000563645 TIMM21Q9BVV7 248 aa2.5□□□□□ -2.01
GDE1-202ENST00000563645 TTTY10Q9BZA0 68 aa2.5□□□□□ -2.01
GDE1-202ENST00000563645 ZNF702PQ9H963 129 aa2.5□□□□□ -2.01
GDE1-202ENST00000563645 PSENENQ9NZ42 101 aa2.5□□□□□ -2.01
GDE1-202ENST00000563645 SPRR3Q9UBC9 169 aa2.5□□□□□ -2.01
GDE1-202ENST00000563645 TAC3Q9UHF0 121 aa2.5□□□□□ -2.01
GDE1-202ENST00000563645 COL18A1P39060 1754 aa2.5□□□□□ -2.01
GDE1-202ENST00000563645 LRP4O75096 1905 aa2.5□□□□□ -2.01
GDE1-202ENST00000563645 LRRK1Q38SD2 2015 aa2.49□□□□□ -2.01
GDE1-202ENST00000563645 LINC01546A6NGU7 62 aa2.49□□□□□ -2.01
GDE1-202ENST00000563645 CPSF4LA6NMK7 179 aaKnown RBP2.49□□□□□ -2.01
GDE1-202ENST00000563645 C10orf142B7Z368 130 aa2.49□□□□□ -2.01
GDE1-202ENST00000563645 LOC730098B7Z3J9 87 aa2.49□□□□□ -2.01
GDE1-202ENST00000563645 C3orf84H3BNL1 204 aa2.49□□□□□ -2.01
GDE1-202ENST00000563645 IGHV3-9P01782 118 aa2.49□□□□□ -2.01
GDE1-202ENST00000563645 MIFP14174 115 aa2.49□□□□□ -2.01
GDE1-202ENST00000563645 S100A4P26447 101 aaKnown RBP2.49□□□□□ -2.01
GDE1-202ENST00000563645 TMEM263Q8WUH6 116 aaKnown RBP2.49□□□□□ -2.01
GDE1-202ENST00000563645 CLEC2BQ92478 149 aa2.49□□□□□ -2.01
GDE1-202ENST00000563645 U3KQK5 164 aa2.49□□□□□ -2.01
GDE1-202ENST00000563645 MYO7AQ13402 2215 aa2.48□□□□□ -2.01
GDE1-202ENST00000563645 IGKV3D-7A0A0C4DH55 119 aa2.48□□□□□ -2.01
GDE1-202ENST00000563645 hDV103S1A0JD37 113 aa2.48□□□□□ -2.01
GDE1-202ENST00000563645 PINLYPA6NC86 204 aa2.48□□□□□ -2.01
GDE1-202ENST00000563645 IGHV3-30P01768 117 aa2.48□□□□□ -2.01
GDE1-202ENST00000563645 IGHV3-30-5P0DP03 117 aa2.48□□□□□ -2.01
GDE1-202ENST00000563645 RPS21P63220 83 aaKnown RBP2.48□□□□□ -2.01
GDE1-202ENST00000563645 REG3AQ06141 175 aa2.48□□□□□ -2.01
GDE1-202ENST00000563645 RMI2Q96E14 147 aa2.48□□□□□ -2.01
GDE1-202ENST00000563645 TMEM141Q96I45 108 aa2.48□□□□□ -2.01
GDE1-202ENST00000563645 NDUFA12Q9UI09 145 aa2.48□□□□□ -2.01
GDE1-202ENST00000563645 PLXNB1O43157 2135 aa2.48□□□□□ -2.01
GDE1-202ENST00000563645 HEATR1Q9H583 2144 aaKnown RBP2.48□□□□□ -2.01
GDE1-202ENST00000563645 ZNF831Q5JPB2 1677 aa2.47□□□□□ -2.01
GDE1-202ENST00000563645 MYOFQ9NZM1 2061 aa2.47□□□□□ -2.01
GDE1-202ENST00000563645 A0A087WVE0 104 aa2.47□□□□□ -2.01
GDE1-202ENST00000563645 TRAV22A0A0B4J277 110 aa2.47□□□□□ -2.01
GDE1-202ENST00000563645 IGHV5-51A0A0C4DH38 117 aa2.47□□□□□ -2.01
GDE1-202ENST00000563645 TRBV10-3A0A0K0K1G6 114 aa2.47□□□□□ -2.01
GDE1-202ENST00000563645 HIGD1CA8MV81 97 aa2.47□□□□□ -2.01
GDE1-202ENST00000563645 COX7A2P2O60397 106 aa2.47□□□□□ -2.01
GDE1-202ENST00000563645 BGLAPP02818 100 aa2.47□□□□□ -2.01
GDE1-202ENST00000563645 CD24P25063 80 aa2.47□□□□□ -2.01
GDE1-202ENST00000563645 RPL28P46779 137 aaKnown RBP2.47□□□□□ -2.01
GDE1-202ENST00000563645 SPINT3P49223 89 aa2.47□□□□□ -2.01
GDE1-202ENST00000563645 ASB16-AS1Q495Z4 193 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms