RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 NIT1Q86X76 327 aa12.95□□□□□ -0.34
TMEM249-202ENST00000562477 GTSF1Q8WW33 167 aa12.95□□□□□ -0.34
TMEM249-202ENST00000562477 SMIM7Q9BQ49 75 aa12.95□□□□□ -0.34
TMEM249-202ENST00000562477 GATCO43716 136 aaKnown RBP12.94□□□□□ -0.34
TMEM249-202ENST00000562477 SUMO4Q6EEV6 95 aa12.94□□□□□ -0.34
TMEM249-202ENST00000562477 TEX261Q6UWH6 196 aa12.94□□□□□ -0.34
TMEM249-202ENST00000562477 M0QY20 66 aa12.93□□□□□ -0.34
TMEM249-202ENST00000562477 C9JQL5 133 aa12.92□□□□□ -0.34
TMEM249-202ENST00000562477 FAM231DQ6ZW35 169 aa12.92□□□□□ -0.34
TMEM249-202ENST00000562477 LINC01551Q86U37 167 aa12.92□□□□□ -0.34
TMEM249-202ENST00000562477 DNAJC30Q96LL9 226 aa12.92□□□□□ -0.34
TMEM249-202ENST00000562477 TRBV6-8A0A0A6YYG3 113 aa12.91□□□□□ -0.34
TMEM249-202ENST00000562477 ZNF727A8MUV8 499 aa12.91□□□□□ -0.34
TMEM249-202ENST00000562477 EREGO14944 169 aa12.91□□□□□ -0.34
TMEM249-202ENST00000562477 PSCAO43653 123 aa12.91□□□□□ -0.34
TMEM249-202ENST00000562477 NDUFS6O75380 124 aaKnown RBP12.91□□□□□ -0.34
TMEM249-202ENST00000562477 TRGC1P0CF51 173 aa12.91□□□□□ -0.34
TMEM249-202ENST00000562477 SRSF3P84103 164 aaKnown RBP12.91□□□□□ -0.34
TMEM249-202ENST00000562477 LAGE3Q14657 143 aa12.91□□□□□ -0.34
TMEM249-202ENST00000562477 TWIST1Q15672 202 aa12.91□□□□□ -0.34
TMEM249-202ENST00000562477 WDR73Q6P4I2 378 aa12.91□□□□□ -0.34
TMEM249-202ENST00000562477 CNFNQ9BYD5 112 aa12.91□□□□□ -0.34
TMEM249-202ENST00000562477 LRCOL1A6NCL2 159 aa12.9□□□□□ -0.34
TMEM249-202ENST00000562477 NTM-AS1Q6ZSK4 140 aa12.9□□□□□ -0.34
TMEM249-202ENST00000562477 PGLYRP4Q96LB8 373 aa12.9□□□□□ -0.34
TMEM249-202ENST00000562477 DPH3P1Q9H4G8 78 aa12.9□□□□□ -0.34
TMEM249-202ENST00000562477 FOXA3P55318 350 aaPredicted RBP12.89□□□□□ -0.35
TMEM249-202ENST00000562477 KLK12Q9UKR0 248 aa12.89□□□□□ -0.35
TMEM249-202ENST00000562477 URGCP-MRPS24S4R325 110 aa12.89□□□□□ -0.35
TMEM249-202ENST00000562477 KRTAP17-1Q9BYP8 105 aa12.88□□□□□ -0.35
TMEM249-202ENST00000562477 A0A087WX48 190 aa12.87□□□□□ -0.35
TMEM249-202ENST00000562477 A8MWL6 223 aa12.87□□□□□ -0.35
TMEM249-202ENST00000562477 TMEM262E9PQX1 116 aa12.87□□□□□ -0.35
TMEM249-202ENST00000562477 WFDC2Q14508 124 aa12.87□□□□□ -0.35
TMEM249-202ENST00000562477 RASL11AQ6T310 242 aa12.87□□□□□ -0.35
TMEM249-202ENST00000562477 PGPEP1Q9NXJ5 209 aa12.87□□□□□ -0.35
TMEM249-202ENST00000562477 TRAV8-3A0A0A6YYJ7 113 aa12.86□□□□□ -0.35
TMEM249-202ENST00000562477 TRAV26-2A0A0B4J265 109 aa12.86□□□□□ -0.35
TMEM249-202ENST00000562477 H7C1H1 209 aa12.86□□□□□ -0.35
TMEM249-202ENST00000562477 MPV17L2Q567V2 206 aa12.86□□□□□ -0.35
TMEM249-202ENST00000562477 CT83Q5H943 113 aa12.86□□□□□ -0.35
TMEM249-202ENST00000562477 DEFB104AQ8WTQ1 72 aa12.86□□□□□ -0.35
TMEM249-202ENST00000562477 CHCHD5Q9BSY4 110 aa12.86□□□□□ -0.35
TMEM249-202ENST00000562477 MAPKAPK5-AS1Q8N8E1 139 aa12.85□□□□□ -0.35
TMEM249-202ENST00000562477 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.85□□□□□ -0.35
TMEM249-202ENST00000562477 GATD1Q8NB37 220 aa12.85□□□□□ -0.35
TMEM249-202ENST00000562477 UBE2WQ96B02 151 aa12.85□□□□□ -0.35
TMEM249-202ENST00000562477 CHCHD7Q9BUK0 85 aa12.85□□□□□ -0.35
TMEM249-202ENST00000562477 OSTCQ9NRP0 149 aa12.85□□□□□ -0.35
TMEM249-202ENST00000562477 CDK2AP2O75956 126 aa12.84□□□□□ -0.35
TMEM249-202ENST00000562477 TMEM241Q24JQ0 296 aa12.84□□□□□ -0.35
TMEM249-202ENST00000562477 KCNIP4Q6PIL6 250 aa12.84□□□□□ -0.35
TMEM249-202ENST00000562477 TSKUQ8WUA8 353 aa12.84□□□□□ -0.35
TMEM249-202ENST00000562477 TM2D2Q9BX73 214 aa12.84□□□□□ -0.35
TMEM249-202ENST00000562477 LECT2O14960 151 aa12.83□□□□□ -0.36
TMEM249-202ENST00000562477 KRTAP10-1P60331 282 aa12.83□□□□□ -0.36
TMEM249-202ENST00000562477 RPL23P62829 140 aaKnown RBP12.83□□□□□ -0.36
TMEM249-202ENST00000562477 GAGE6Q13070 117 aa12.83□□□□□ -0.36
TMEM249-202ENST00000562477 PEA15Q15121 130 aa12.83□□□□□ -0.36
TMEM249-202ENST00000562477 CDPF1Q6NVV7 123 aa12.83□□□□□ -0.36
TMEM249-202ENST00000562477 C15orf54Q8N8G6 183 aa12.83□□□□□ -0.36
TMEM249-202ENST00000562477 Q8N976 141 aa12.83□□□□□ -0.36
TMEM249-202ENST00000562477 ISOC2Q96AB3 205 aa12.83□□□□□ -0.36
TMEM249-202ENST00000562477 NIT2Q9NQR4 276 aa12.83□□□□□ -0.36
TMEM249-202ENST00000562477 V9GYV3 84 aa12.83□□□□□ -0.36
TMEM249-202ENST00000562477 HIGD1CA8MV81 97 aa12.82□□□□□ -0.36
TMEM249-202ENST00000562477 FAM74A3Q4VXF1 159 aa12.82□□□□□ -0.36
TMEM249-202ENST00000562477 TMEM97Q5BJF2 176 aa12.82□□□□□ -0.36
TMEM249-202ENST00000562477 ATRAIDQ6UW56 229 aa12.82□□□□□ -0.36
TMEM249-202ENST00000562477 RPL39LQ96EH5 51 aaKnown RBP12.82□□□□□ -0.36
TMEM249-202ENST00000562477 TRBV25-1A0A075B6N4 114 aa12.81□□□□□ -0.36
TMEM249-202ENST00000562477 IGKV2D-24A0A075B6R9 120 aa12.81□□□□□ -0.36
TMEM249-202ENST00000562477 ADIRFQ15847 76 aa12.81□□□□□ -0.36
TMEM249-202ENST00000562477 IQCJQ1A5X6 159 aa12.81□□□□□ -0.36
TMEM249-202ENST00000562477 Q8N814 137 aa12.81□□□□□ -0.36
TMEM249-202ENST00000562477 PCLOQ9Y6V0 5065 aa12.8□□□□□ -0.36
TMEM249-202ENST00000562477 IGHV1-24A0A0C4DH33 117 aa12.8□□□□□ -0.36
TMEM249-202ENST00000562477 ANGP03950 147 aaKnown RBP12.8□□□□□ -0.36
TMEM249-202ENST00000562477 RBX1P62877 108 aa12.8□□□□□ -0.36
TMEM249-202ENST00000562477 ELOBQ15370 118 aa12.8□□□□□ -0.36
TMEM249-202ENST00000562477 ENHOQ6UWT2 76 aa12.8□□□□□ -0.36
TMEM249-202ENST00000562477 SMIM15Q7Z3B0 74 aa12.8□□□□□ -0.36
TMEM249-202ENST00000562477 BAALCQ8WXS3 180 aa12.8□□□□□ -0.36
TMEM249-202ENST00000562477 KRTAP4-5Q9BYR2 181 aa12.8□□□□□ -0.36
TMEM249-202ENST00000562477 ABCA13Q86UQ4 5058 aa12.8□□□□□ -0.36
TMEM249-202ENST00000562477 A0A1B0GUT8 65 aa12.79□□□□□ -0.36
TMEM249-202ENST00000562477 GFRA4Q9GZZ7 299 aa12.79□□□□□ -0.36
TMEM249-202ENST00000562477 NAT8Q9UHE5 227 aa12.79□□□□□ -0.36
TMEM249-202ENST00000562477 DNAH8Q96JB1 4490 aa12.78□□□□□ -0.36
TMEM249-202ENST00000562477 IGLV5-52A0A0A0MRZ9 124 aa12.78□□□□□ -0.36
TMEM249-202ENST00000562477 GAS8-AS1O95177 125 aa12.78□□□□□ -0.36
TMEM249-202ENST00000562477 CLPSL2Q6UWE3 100 aa12.78□□□□□ -0.36
TMEM249-202ENST00000562477 BORCS7Q96B45 105 aa12.78□□□□□ -0.36
TMEM249-202ENST00000562477 RMI2Q96E14 147 aa12.78□□□□□ -0.36
TMEM249-202ENST00000562477 PKIAP61925 76 aa12.77□□□□□ -0.37
TMEM249-202ENST00000562477 NUP35Q8NFH5 326 aa12.77□□□□□ -0.37
TMEM249-202ENST00000562477 TMEM243Q9BU79 118 aa12.77□□□□□ -0.37
TMEM249-202ENST00000562477 FAM231BA6NCW3 169 aa12.76□□□□□ -0.37
TMEM249-202ENST00000562477 GCSHP23434 173 aa12.76□□□□□ -0.37
TMEM249-202ENST00000562477 RNF185Q96GF1 192 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms