RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 OR10G8Q8NGN5 311 aa10.72□□□□□ -0.69
LMX1B-204ENST00000561065 TM2D2Q9BX73 214 aa10.72□□□□□ -0.69
LMX1B-204ENST00000561065 RPP21Q9H633 154 aaKnown RBP10.72□□□□□ -0.69
LMX1B-204ENST00000561065 PGPEP1Q9NXJ5 209 aa10.72□□□□□ -0.69
LMX1B-204ENST00000561065 TRAV8-3A0A0A6YYJ7 113 aa10.71□□□□□ -0.69
LMX1B-204ENST00000561065 MUC21A0A0G2JKD1 596 aa10.71□□□□□ -0.69
LMX1B-204ENST00000561065 MUC21A0A140T8X8 626 aa10.71□□□□□ -0.69
LMX1B-204ENST00000561065 GATCO43716 136 aaKnown RBP10.71□□□□□ -0.69
LMX1B-204ENST00000561065 LAGE3Q14657 143 aa10.71□□□□□ -0.69
LMX1B-204ENST00000561065 FAM74A3Q4VXF1 159 aa10.71□□□□□ -0.69
LMX1B-204ENST00000561065 BORCS7Q96B45 105 aa10.71□□□□□ -0.69
LMX1B-204ENST00000561065 DNAJC30Q96LL9 226 aa10.71□□□□□ -0.69
LMX1B-204ENST00000561065 SMIM7Q9BQ49 75 aa10.71□□□□□ -0.69
LMX1B-204ENST00000561065 SMDT1Q9H4I9 107 aa10.71□□□□□ -0.69
LMX1B-204ENST00000561065 A0A087WX48 190 aa10.7□□□□□ -0.7
LMX1B-204ENST00000561065 ZNF727A8MUV8 499 aa10.7□□□□□ -0.7
LMX1B-204ENST00000561065 GZMBP10144 247 aa10.7□□□□□ -0.7
LMX1B-204ENST00000561065 UBE2D3P61077 147 aa10.7□□□□□ -0.7
LMX1B-204ENST00000561065 UBE2D2P62837 147 aa10.7□□□□□ -0.7
LMX1B-204ENST00000561065 TEX261Q6UWH6 196 aa10.7□□□□□ -0.7
LMX1B-204ENST00000561065 LYZL1Q6UWQ5 148 aa10.7□□□□□ -0.7
LMX1B-204ENST00000561065 DAZ4Q86SG3 579 aaKnown RBP10.7□□□□□ -0.7
LMX1B-204ENST00000561065 CHCHD7Q9BUK0 85 aa10.7□□□□□ -0.7
LMX1B-204ENST00000561065 DAZ3Q9NR90 486 aaKnown RBP10.7□□□□□ -0.7
LMX1B-204ENST00000561065 COX11Q9Y6N1 276 aa10.7□□□□□ -0.7
LMX1B-204ENST00000561065 IGHV3-30P01768 117 aa10.69□□□□□ -0.7
LMX1B-204ENST00000561065 IGHV3-33P01772 117 aa10.69□□□□□ -0.7
LMX1B-204ENST00000561065 IGHV3-30-3P0DP02 117 aa10.69□□□□□ -0.7
LMX1B-204ENST00000561065 IGHV3-30-5P0DP03 117 aa10.69□□□□□ -0.7
LMX1B-204ENST00000561065 NTF3P20783 257 aa10.69□□□□□ -0.7
LMX1B-204ENST00000561065 KRTAP10-1P60331 282 aa10.69□□□□□ -0.7
LMX1B-204ENST00000561065 PEA15Q15121 130 aa10.69□□□□□ -0.7
LMX1B-204ENST00000561065 TWIST1Q15672 202 aa10.69□□□□□ -0.7
LMX1B-204ENST00000561065 CDPF1Q6NVV7 123 aa10.69□□□□□ -0.7
LMX1B-204ENST00000561065 FAM231DQ6ZW35 169 aa10.69□□□□□ -0.7
LMX1B-204ENST00000561065 RMI2Q96E14 147 aa10.69□□□□□ -0.7
LMX1B-204ENST00000561065 DPH3P1Q9H4G8 78 aa10.69□□□□□ -0.7
LMX1B-204ENST00000561065 LRCOL1A6NCL2 159 aa10.68□□□□□ -0.7
LMX1B-204ENST00000561065 MGPP08493 103 aa10.68□□□□□ -0.7
LMX1B-204ENST00000561065 C15orf54Q8N8G6 183 aa10.68□□□□□ -0.7
LMX1B-204ENST00000561065 RNASE7Q9H1E1 156 aaKnown RBP10.68□□□□□ -0.7
LMX1B-204ENST00000561065 TMEM262E9PQX1 116 aa10.67□□□□□ -0.7
LMX1B-204ENST00000561065 XGP55808 180 aa10.67□□□□□ -0.7
LMX1B-204ENST00000561065 TMEM241Q24JQ0 296 aa10.67□□□□□ -0.7
LMX1B-204ENST00000561065 CT83Q5H943 113 aa10.67□□□□□ -0.7
LMX1B-204ENST00000561065 NEXN-AS1Q8NBZ9 246 aa10.67□□□□□ -0.7
LMX1B-204ENST00000561065 FRZBQ92765 325 aa10.67□□□□□ -0.7
LMX1B-204ENST00000561065 Q9HAA7 133 aa10.67□□□□□ -0.7
LMX1B-204ENST00000561065 TRBV6-8A0A0A6YYG3 113 aa10.66□□□□□ -0.7
LMX1B-204ENST00000561065 K7EN84 100 aa10.66□□□□□ -0.7
LMX1B-204ENST00000561065 CTRLP40313 264 aa10.66□□□□□ -0.7
LMX1B-204ENST00000561065 RAB14P61106 215 aa10.66□□□□□ -0.7
LMX1B-204ENST00000561065 CNFNQ9BYD5 112 aa10.66□□□□□ -0.7
LMX1B-204ENST00000561065 KIF25-AS1Q9Y6Z4 181 aa10.66□□□□□ -0.7
LMX1B-204ENST00000561065 FAM231BA6NCW3 169 aa10.65□□□□□ -0.7
LMX1B-204ENST00000561065 SRP19P09132 144 aaKnown RBP10.65□□□□□ -0.7
LMX1B-204ENST00000561065 Q0VG73 95 aa10.64□□□□□ -0.71
LMX1B-204ENST00000561065 RASL11AQ6T310 242 aa10.64□□□□□ -0.71
LMX1B-204ENST00000561065 NIT1Q86X76 327 aa10.64□□□□□ -0.71
LMX1B-204ENST00000561065 GFRA4Q9GZZ7 299 aa10.64□□□□□ -0.71
LMX1B-204ENST00000561065 NIT2Q9NQR4 276 aa10.64□□□□□ -0.71
LMX1B-204ENST00000561065 OSTCQ9NRP0 149 aa10.64□□□□□ -0.71
LMX1B-204ENST00000561065 M0QY20 66 aa10.63□□□□□ -0.71
LMX1B-204ENST00000561065 FOXA3P55318 350 aaPredicted RBP10.63□□□□□ -0.71
LMX1B-204ENST00000561065 WFDC2Q14508 124 aa10.63□□□□□ -0.71
LMX1B-204ENST00000561065 LINC01551Q86U37 167 aa10.63□□□□□ -0.71
LMX1B-204ENST00000561065 CHCHD5Q9BSY4 110 aa10.63□□□□□ -0.71
LMX1B-204ENST00000561065 TRBV25-1A0A075B6N4 114 aa10.62□□□□□ -0.71
LMX1B-204ENST00000561065 HAMPP81172 84 aa10.61□□□□□ -0.71
LMX1B-204ENST00000561065 SUMO4Q6EEV6 95 aa10.61□□□□□ -0.71
LMX1B-204ENST00000561065 TSKUQ8WUA8 353 aa10.61□□□□□ -0.71
LMX1B-204ENST00000561065 NAT8Q9UHE5 227 aa10.61□□□□□ -0.71
LMX1B-204ENST00000561065 Q8N814 137 aa10.6□□□□□ -0.71
LMX1B-204ENST00000561065 PGLYRP4Q96LB8 373 aa10.6□□□□□ -0.71
LMX1B-204ENST00000561065 IGHV1-24A0A0C4DH33 117 aa10.59□□□□□ -0.71
LMX1B-204ENST00000561065 A0A1B0GUT8 65 aa10.59□□□□□ -0.71
LMX1B-204ENST00000561065 CRPP02741 224 aa10.59□□□□□ -0.71
LMX1B-204ENST00000561065 GCSHP23434 173 aa10.59□□□□□ -0.71
LMX1B-204ENST00000561065 NTN5Q8WTR8 489 aaPredicted RBP10.59□□□□□ -0.71
LMX1B-204ENST00000561065 GTSF1Q8WW33 167 aa10.59□□□□□ -0.71
LMX1B-204ENST00000561065 KLK12Q9UKR0 248 aa10.59□□□□□ -0.71
LMX1B-204ENST00000561065 IGLV5-52A0A0A0MRZ9 124 aa10.58□□□□□ -0.71
LMX1B-204ENST00000561065 RIGQ13278 110 aa10.58□□□□□ -0.71
LMX1B-204ENST00000561065 UBE2WQ96B02 151 aa10.58□□□□□ -0.71
LMX1B-204ENST00000561065 MYCBP2O75592 4640 aa10.58□□□□□ -0.72
LMX1B-204ENST00000561065 HIGD1CA8MV81 97 aa10.58□□□□□ -0.72
LMX1B-204ENST00000561065 COTL1Q14019 142 aa10.58□□□□□ -0.72
LMX1B-204ENST00000561065 ADIRFQ15847 76 aa10.58□□□□□ -0.72
LMX1B-204ENST00000561065 IQCJQ1A5X6 159 aa10.58□□□□□ -0.72
LMX1B-204ENST00000561065 IGKV2D-24A0A075B6R9 120 aa10.57□□□□□ -0.72
LMX1B-204ENST00000561065 EPM2AB3EWF7 344 aa10.57□□□□□ -0.72
LMX1B-204ENST00000561065 UBE2L6O14933 153 aa10.57□□□□□ -0.72
LMX1B-204ENST00000561065 ANGP03950 147 aaKnown RBP10.57□□□□□ -0.72
LMX1B-204ENST00000561065 ISOC2Q96AB3 205 aa10.57□□□□□ -0.72
LMX1B-204ENST00000561065 C1orf43Q9BWL3 253 aa10.57□□□□□ -0.72
LMX1B-204ENST00000561065 NAT8BQ9UHF3 227 aa10.57□□□□□ -0.72
LMX1B-204ENST00000561065 LECT2O14960 151 aa10.56□□□□□ -0.72
LMX1B-204ENST00000561065 PPP1R17O96001 155 aa10.56□□□□□ -0.72
LMX1B-204ENST00000561065 RPL23P62829 140 aaKnown RBP10.56□□□□□ -0.72
LMX1B-204ENST00000561065 Q5VSD8 79 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms