RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 SPINK8P0C7L1 97 aa-0.96□□□□□ -2.56
PSMA4-221ENST00000560842 ACYP2P14621 99 aa-0.96□□□□□ -2.56
PSMA4-221ENST00000560842 S100GP29377 79 aa-0.96□□□□□ -2.56
PSMA4-221ENST00000560842 SPAG11BQ08648 103 aa-0.96□□□□□ -2.56
PSMA4-221ENST00000560842 C20orf197Q8N268 126 aa-0.96□□□□□ -2.56
PSMA4-221ENST00000560842 SKA2Q8WVK7 121 aaPredicted RBP-0.96□□□□□ -2.56
PSMA4-221ENST00000560842 BANF2Q9H503 90 aa-0.96□□□□□ -2.56
PSMA4-221ENST00000560842 BATF3Q9NR55 127 aa-0.96□□□□□ -2.56
PSMA4-221ENST00000560842 CALML5Q9NZT1 146 aa-0.96□□□□□ -2.56
PSMA4-221ENST00000560842 SCP2D1Q9UJQ7 156 aa-0.96□□□□□ -2.56
PSMA4-221ENST00000560842 V9GYV3 84 aa-0.96□□□□□ -2.56
PSMA4-221ENST00000560842 MXRA5Q9NR99 2828 aa-0.96□□□□□ -2.56
PSMA4-221ENST00000560842 STARD9Q9P2P6 4700 aa-0.96□□□□□ -2.56
PSMA4-221ENST00000560842 SIPA1L3O60292 1781 aaPredicted RBP-0.97□□□□□ -2.56
PSMA4-221ENST00000560842 SMIM24O75264 130 aa-0.97□□□□□ -2.56
PSMA4-221ENST00000560842 TMEM244Q5VVB8 128 aa-0.97□□□□□ -2.56
PSMA4-221ENST00000560842 GVINP1Q7Z2Y8 2422 aa-0.97□□□□□ -2.57
PSMA4-221ENST00000560842 GOLGA3Q08378 1498 aa-0.98□□□□□ -2.57
PSMA4-221ENST00000560842 HIVEP1P15822 2718 aa-0.98□□□□□ -2.57
PSMA4-221ENST00000560842 SPRR2BP35325 72 aa-0.98□□□□□ -2.57
PSMA4-221ENST00000560842 Q8IZM0 81 aa-0.98□□□□□ -2.57
PSMA4-221ENST00000560842 MAGOHBQ96A72 148 aaKnown RBP-0.98□□□□□ -2.57
PSMA4-221ENST00000560842 ATRQ13535 2644 aa-0.98□□□□□ -2.57
PSMA4-221ENST00000560842 CNOT1A5YKK6 2376 aaKnown RBP-0.98□□□□□ -2.57
PSMA4-221ENST00000560842 PKHD1P08F94 4074 aa-0.98□□□□□ -2.57
PSMA4-221ENST00000560842 MYH9P35579 1960 aaKnown RBP-0.99□□□□□ -2.57
PSMA4-221ENST00000560842 J3QLW9 94 aa-0.99□□□□□ -2.57
PSMA4-221ENST00000560842 M0R2P5 195 aa-0.99□□□□□ -2.57
PSMA4-221ENST00000560842 DEGS1O15121 323 aa-0.99□□□□□ -2.57
PSMA4-221ENST00000560842 SPRR1AP35321 89 aa-0.99□□□□□ -2.57
PSMA4-221ENST00000560842 USF3Q68DE3 2245 aa-0.99□□□□□ -2.57
PSMA4-221ENST00000560842 UBR4Q5T4S7 5183 aa-1□□□□□ -2.57
PSMA4-221ENST00000560842 PARP14Q460N5 1801 aa-1□□□□□ -2.57
PSMA4-221ENST00000560842 TRGV1A0A0A0MS02 117 aa-1□□□□□ -2.57
PSMA4-221ENST00000560842 BORCS7-ASMTA0A0B4J1R7 106 aa-1□□□□□ -2.57
PSMA4-221ENST00000560842 PIN1P1O15428 100 aa-1□□□□□ -2.57
PSMA4-221ENST00000560842 TNFSF15O95150 251 aa-1□□□□□ -2.57
PSMA4-221ENST00000560842 TRAV12-3A0A0B4J271 114 aa-1.01□□□□□ -2.57
PSMA4-221ENST00000560842 TRBV10-3A0A0K0K1G6 114 aa-1.01□□□□□ -2.57
PSMA4-221ENST00000560842 SPCS2Q15005 226 aa-1.01□□□□□ -2.57
PSMA4-221ENST00000560842 GINS2Q9Y248 185 aa-1.01□□□□□ -2.57
PSMA4-221ENST00000560842 LSM2Q9Y333 95 aaKnown RBP-1.01□□□□□ -2.57
PSMA4-221ENST00000560842 MUC22E2RYF6 1773 aaPredicted RBP-1.01□□□□□ -2.57
PSMA4-221ENST00000560842 NBPF19A0A087WUL8 3843 aa-1.01□□□□□ -2.57
PSMA4-221ENST00000560842 PRKDCP78527 4128 aaKnown RBP-1.01□□□□□ -2.57
PSMA4-221ENST00000560842 URB1O60287 2271 aaKnown RBP-1.02□□□□□ -2.57
PSMA4-221ENST00000560842 CLLU1Q5K131 121 aa-1.02□□□□□ -2.57
PSMA4-221ENST00000560842 PPRC1Q5VV67 1664 aaKnown RBP-1.02□□□□□ -2.57
PSMA4-221ENST00000560842 TCTE3Q8IZS6 198 aa-1.02□□□□□ -2.57
PSMA4-221ENST00000560842 HIGD1AQ9Y241 93 aa-1.02□□□□□ -2.57
PSMA4-221ENST00000560842 HYDINQ4G0P3 5121 aa-1.02□□□□□ -2.57
PSMA4-221ENST00000560842 TRAV22A0A0B4J277 110 aa-1.03□□□□□ -2.57
PSMA4-221ENST00000560842 G3V318 75 aa-1.03□□□□□ -2.57
PSMA4-221ENST00000560842 TSTD3H0UI37 97 aa-1.03□□□□□ -2.57
PSMA4-221ENST00000560842 HSPB11Q9Y547 144 aa-1.03□□□□□ -2.57
PSMA4-221ENST00000560842 SETD2Q9BYW2 2564 aaPredicted RBP-1.04□□□□□ -2.58
PSMA4-221ENST00000560842 ERCC6Q03468 1493 aa-1.05□□□□□ -2.58
PSMA4-221ENST00000560842 ARFGEF1Q9Y6D6 1849 aa-1.05□□□□□ -2.58
PSMA4-221ENST00000560842 NBEAP1P0C6P0 100 aa-1.05□□□□□ -2.58
PSMA4-221ENST00000560842 S100A5P33763 92 aa-1.05□□□□□ -2.58
PSMA4-221ENST00000560842 SMIM15Q7Z3B0 74 aa-1.05□□□□□ -2.58
PSMA4-221ENST00000560842 SPCS1Q9Y6A9 102 aa-1.05□□□□□ -2.58
PSMA4-221ENST00000560842 EPPK1P58107 5090 aaKnown RBP-1.05□□□□□ -2.58
PSMA4-221ENST00000560842 DNAH6Q9C0G6 4158 aa-1.06□□□□□ -2.58
PSMA4-221ENST00000560842 LINC01545Q5VT33 79 aa-1.06□□□□□ -2.58
PSMA4-221ENST00000560842 Q5VV11 94 aa-1.06□□□□□ -2.58
PSMA4-221ENST00000560842 EPG5Q9HCE0 2579 aa-1.06□□□□□ -2.58
PSMA4-221ENST00000560842 DOPEY1Q5JWR5 2465 aa-1.07□□□□□ -2.58
PSMA4-221ENST00000560842 MYO7BQ6PIF6 2116 aa-1.07□□□□□ -2.58
PSMA4-221ENST00000560842 EDDM3BP56851 147 aa-1.07□□□□□ -2.58
PSMA4-221ENST00000560842 RBM3P98179 157 aaKnown RBP-1.07□□□□□ -2.58
PSMA4-221ENST00000560842 WFDC6Q9BQY6 131 aa-1.07□□□□□ -2.58
PSMA4-221ENST00000560842 SPANXCQ9NY87 97 aa-1.07□□□□□ -2.58
PSMA4-221ENST00000560842 NDUFA12Q9UI09 145 aa-1.07□□□□□ -2.58
PSMA4-221ENST00000560842 RYR3Q15413 4870 aa-1.08□□□□□ -2.58
PSMA4-221ENST00000560842 USP9YO00507 2555 aaPredicted RBP-1.08□□□□□ -2.58
PSMA4-221ENST00000560842 TRBV20-1A0A075B6N2 111 aa-1.08□□□□□ -2.58
PSMA4-221ENST00000560842 CMPK1P30085 196 aa-1.08□□□□□ -2.58
PSMA4-221ENST00000560842 RYR1P21817 5038 aa-1.09□□□□□ -2.58
PSMA4-221ENST00000560842 MORN2Q502X0 79 aa-1.09□□□□□ -2.58
PSMA4-221ENST00000560842 IBTKQ9P2D0 1353 aaPredicted RBP-1.09□□□□□ -2.58
PSMA4-221ENST00000560842 ZMYM4Q5VZL5 1548 aa-1.1□□□□□ -2.58
PSMA4-221ENST00000560842 TRAV1-2A0A0B4J238 106 aa-1.1□□□□□ -2.59
PSMA4-221ENST00000560842 CLPSL1A2RUU4 121 aa-1.1□□□□□ -2.59
PSMA4-221ENST00000560842 K7EQZ3 153 aa-1.1□□□□□ -2.59
PSMA4-221ENST00000560842 APOC4-APOC2K7ER74 178 aa-1.1□□□□□ -2.59
PSMA4-221ENST00000560842 NPFFO15130 113 aa-1.1□□□□□ -2.59
PSMA4-221ENST00000560842 SYNJ1O43426 1573 aa-1.1□□□□□ -2.59
PSMA4-221ENST00000560842 KIAA1109Q2LD37 5005 aa-1.1□□□□□ -2.59
PSMA4-221ENST00000560842 ITPR3Q14573 2671 aa-1.11□□□□□ -2.59
PSMA4-221ENST00000560842 CCDC153Q494R4 210 aa-1.11□□□□□ -2.59
PSMA4-221ENST00000560842 VSTM2AQ8TAG5 236 aa-1.11□□□□□ -2.59
PSMA4-221ENST00000560842 BCL9LQ86UU0 1499 aa-1.12□□□□□ -2.59
PSMA4-221ENST00000560842 PI4KAP42356 2102 aa-1.12□□□□□ -2.59
PSMA4-221ENST00000560842 GOLGA4Q13439 2230 aaKnown RBP-1.12□□□□□ -2.59
PSMA4-221ENST00000560842 SMIM6P0DI80 62 aa-1.12□□□□□ -2.59
PSMA4-221ENST00000560842 UBE2D1P51668 147 aa-1.12□□□□□ -2.59
PSMA4-221ENST00000560842 SPANXA1Q9NS26 97 aa-1.12□□□□□ -2.59
PSMA4-221ENST00000560842 TACC2O95359 2948 aa-1.12□□□□□ -2.59
PSMA4-221ENST00000560842 IFT172Q9UG01 1749 aa-1.12□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms