RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 PFDN1O60925 122 aa7.32□□□□□ -1.24
GABPB1-210ENST00000560825 MPV17L2Q567V2 206 aa7.32□□□□□ -1.24
GABPB1-210ENST00000560825 Q6ZSA8 131 aa7.32□□□□□ -1.24
GABPB1-210ENST00000560825 Q8N976 141 aa7.32□□□□□ -1.24
GABPB1-210ENST00000560825 OR10G8Q8NGN5 311 aa7.32□□□□□ -1.24
GABPB1-210ENST00000560825 UBE2WQ96B02 151 aa7.32□□□□□ -1.24
GABPB1-210ENST00000560825 A0A087WWC5 75 aa7.31□□□□□ -1.24
GABPB1-210ENST00000560825 C19orf71A6NCJ1 209 aa7.31□□□□□ -1.24
GABPB1-210ENST00000560825 OR5AL1P0C617 328 aa7.31□□□□□ -1.24
GABPB1-210ENST00000560825 IGLC6P0CF74 106 aa7.31□□□□□ -1.24
GABPB1-210ENST00000560825 RAB4BP61018 213 aa7.31□□□□□ -1.24
GABPB1-210ENST00000560825 IGKV2D-24A0A075B6R9 120 aa7.3□□□□□ -1.24
GABPB1-210ENST00000560825 TRBV6-8A0A0A6YYG3 113 aa7.3□□□□□ -1.24
GABPB1-210ENST00000560825 TRAV8-3A0A0A6YYJ7 113 aa7.3□□□□□ -1.24
GABPB1-210ENST00000560825 TRAV1-1A0A0B4J248 108 aa7.3□□□□□ -1.24
GABPB1-210ENST00000560825 RPL36AP83881 106 aaKnown RBP7.3□□□□□ -1.24
GABPB1-210ENST00000560825 RPL36ALQ969Q0 106 aaKnown RBP7.3□□□□□ -1.24
GABPB1-210ENST00000560825 TMEM70Q9BUB7 260 aa7.3□□□□□ -1.24
GABPB1-210ENST00000560825 DMBT1Q9UGM3 2413 aaPredicted RBP7.3□□□□□ -1.24
GABPB1-210ENST00000560825 TRBV10-1A0A0K0K1A3 114 aa7.29□□□□□ -1.24
GABPB1-210ENST00000560825 S100A9P06702 114 aaKnown RBP7.29□□□□□ -1.24
GABPB1-210ENST00000560825 CXCL1P09341 107 aa7.29□□□□□ -1.24
GABPB1-210ENST00000560825 SULT1A2P50226 295 aa7.29□□□□□ -1.24
GABPB1-210ENST00000560825 SPANXN1Q5VSR9 72 aa7.29□□□□□ -1.24
GABPB1-210ENST00000560825 ATRAIDQ6UW56 229 aa7.29□□□□□ -1.24
GABPB1-210ENST00000560825 CLPSL2Q6UWE3 100 aa7.29□□□□□ -1.24
GABPB1-210ENST00000560825 KRTAP19-1Q8IUB9 90 aa7.29□□□□□ -1.24
GABPB1-210ENST00000560825 C15orf54Q8N8G6 183 aa7.29□□□□□ -1.24
GABPB1-210ENST00000560825 FRZBQ92765 325 aa7.29□□□□□ -1.24
GABPB1-210ENST00000560825 TPPP3Q9BW30 176 aa7.29□□□□□ -1.24
GABPB1-210ENST00000560825 F5H697 171 aa7.28□□□□□ -1.24
GABPB1-210ENST00000560825 K7EN84 100 aa7.28□□□□□ -1.24
GABPB1-210ENST00000560825 KRTAP10-4P60372 401 aaPredicted RBP7.28□□□□□ -1.24
GABPB1-210ENST00000560825 KRTAP26-1Q6PEX3 210 aa7.28□□□□□ -1.24
GABPB1-210ENST00000560825 TM2D2Q9BX73 214 aa7.28□□□□□ -1.24
GABPB1-210ENST00000560825 MANBALQ9NQG1 85 aa7.28□□□□□ -1.24
GABPB1-210ENST00000560825 A0A087WX48 190 aa7.27□□□□□ -1.24
GABPB1-210ENST00000560825 TMEM262E9PQX1 116 aa7.27□□□□□ -1.24
GABPB1-210ENST00000560825 M0QY20 66 aa7.27□□□□□ -1.24
GABPB1-210ENST00000560825 MEF2BQ02080 365 aaPredicted RBP7.27□□□□□ -1.24
GABPB1-210ENST00000560825 GAGE6Q13070 117 aa7.27□□□□□ -1.24
GABPB1-210ENST00000560825 SUMO4Q6EEV6 95 aa7.27□□□□□ -1.24
GABPB1-210ENST00000560825 SCXQ7RTU7 201 aa7.27□□□□□ -1.24
GABPB1-210ENST00000560825 TCTE3Q8IZS6 198 aa7.27□□□□□ -1.24
GABPB1-210ENST00000560825 OR2D3Q8NGH3 330 aa7.27□□□□□ -1.24
GABPB1-210ENST00000560825 GFRA4Q9GZZ7 299 aa7.27□□□□□ -1.24
GABPB1-210ENST00000560825 URGCP-MRPS24S4R325 110 aa7.27□□□□□ -1.24
GABPB1-210ENST00000560825 MGPP08493 103 aa7.27□□□□□ -1.25
GABPB1-210ENST00000560825 LYZL1Q6UWQ5 148 aa7.27□□□□□ -1.25
GABPB1-210ENST00000560825 Q6ZNX1 250 aa7.27□□□□□ -1.25
GABPB1-210ENST00000560825 C9orf62Q8N4C0 152 aa7.27□□□□□ -1.25
GABPB1-210ENST00000560825 FER1L6-AS1Q8NA97 138 aa7.27□□□□□ -1.25
GABPB1-210ENST00000560825 VAX2Q9UIW0 290 aa7.27□□□□□ -1.25
GABPB1-210ENST00000560825 hCG_2014768A0A024R1R8 64 aa7.26□□□□□ -1.25
GABPB1-210ENST00000560825 PANO1I0J062 215 aa7.26□□□□□ -1.25
GABPB1-210ENST00000560825 ANGP03950 147 aaKnown RBP7.26□□□□□ -1.25
GABPB1-210ENST00000560825 BCL2P10415 239 aa7.26□□□□□ -1.25
GABPB1-210ENST00000560825 GNG4P50150 75 aa7.26□□□□□ -1.25
GABPB1-210ENST00000560825 FOXA3P55318 350 aaPredicted RBP7.26□□□□□ -1.25
GABPB1-210ENST00000560825 RBX1P62877 108 aa7.26□□□□□ -1.25
GABPB1-210ENST00000560825 CHCHD5Q9BSY4 110 aa7.26□□□□□ -1.25
GABPB1-210ENST00000560825 RNASE7Q9H1E1 156 aaKnown RBP7.26□□□□□ -1.25
GABPB1-210ENST00000560825 EIF5AP63241 154 aaKnown RBP7.25□□□□□ -1.25
GABPB1-210ENST00000560825 TOR2AQ5JU69 321 aa7.25□□□□□ -1.25
GABPB1-210ENST00000560825 LINC00269Q8N2A0 174 aa7.25□□□□□ -1.25
GABPB1-210ENST00000560825 NUDT10Q8NFP7 164 aa7.25□□□□□ -1.25
GABPB1-210ENST00000560825 NUDT11Q96G61 164 aa7.25□□□□□ -1.25
GABPB1-210ENST00000560825 AP1S3Q96PC3 154 aa7.25□□□□□ -1.25
GABPB1-210ENST00000560825 MED9Q9NWA0 146 aa7.25□□□□□ -1.25
GABPB1-210ENST00000560825 IGLV4-60A0A075B6I1 120 aa7.24□□□□□ -1.25
GABPB1-210ENST00000560825 TRAV26-2A0A0B4J265 109 aa7.24□□□□□ -1.25
GABPB1-210ENST00000560825 FAM229AH3BQW9 127 aa7.24□□□□□ -1.25
GABPB1-210ENST00000560825 HLA-DQA1P01909 254 aa7.24□□□□□ -1.25
GABPB1-210ENST00000560825 PRSS1P07477 247 aa7.24□□□□□ -1.25
GABPB1-210ENST00000560825 NTF3P20783 257 aa7.24□□□□□ -1.25
GABPB1-210ENST00000560825 RAB5CP51148 216 aa7.24□□□□□ -1.25
GABPB1-210ENST00000560825 NKX2-5P52952 324 aaPredicted RBP7.24□□□□□ -1.25
GABPB1-210ENST00000560825 OCC1Q8TAD7 63 aa7.24□□□□□ -1.25
GABPB1-210ENST00000560825 CIRBP-AS1Q8TBR5 109 aa7.24□□□□□ -1.25
GABPB1-210ENST00000560825 GTSF1Q8WW33 167 aa7.24□□□□□ -1.25
GABPB1-210ENST00000560825 CHCHD7Q9BUK0 85 aa7.24□□□□□ -1.25
GABPB1-210ENST00000560825 IGLV10-54A0A075B6I4 117 aa7.23□□□□□ -1.25
GABPB1-210ENST00000560825 USP17L23D6RBM5 183 aa7.23□□□□□ -1.25
GABPB1-210ENST00000560825 GAS8-AS1O95177 125 aa7.23□□□□□ -1.25
GABPB1-210ENST00000560825 ALKAL2Q6UX46 152 aa7.23□□□□□ -1.25
GABPB1-210ENST00000560825 SLC51BQ86UW2 128 aa7.23□□□□□ -1.25
GABPB1-210ENST00000560825 C20orf203Q8NBC4 194 aa7.23□□□□□ -1.25
GABPB1-210ENST00000560825 PRR34Q9NV39 138 aa7.23□□□□□ -1.25
GABPB1-210ENST00000560825 A0A1B0GVG6 124 aa7.22□□□□□ -1.25
GABPB1-210ENST00000560825 PDE6DO43924 150 aa7.22□□□□□ -1.25
GABPB1-210ENST00000560825 P01737 135 aa7.22□□□□□ -1.25
GABPB1-210ENST00000560825 CTRLP40313 264 aa7.22□□□□□ -1.25
GABPB1-210ENST00000560825 IQCJQ1A5X6 159 aa7.22□□□□□ -1.25
GABPB1-210ENST00000560825 C1orf43Q9BWL3 253 aa7.22□□□□□ -1.25
GABPB1-210ENST00000560825 COX11Q9Y6N1 276 aa7.22□□□□□ -1.25
GABPB1-210ENST00000560825 IFNA1P01562 189 aa7.21□□□□□ -1.25
GABPB1-210ENST00000560825 SMIM17P0DL12 118 aa7.21□□□□□ -1.25
GABPB1-210ENST00000560825 GATD1Q8NB37 220 aa7.21□□□□□ -1.25
GABPB1-210ENST00000560825 RMI2Q96E14 147 aa7.21□□□□□ -1.25
GABPB1-210ENST00000560825 RPL39LQ96EH5 51 aaKnown RBP7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms