RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 TRBV20OR9-2A0A075B6H5 130 aa8.09□□□□□ -1.11
TPM1-216ENST00000558910 SMIM17P0DL12 118 aa8.09□□□□□ -1.11
TPM1-216ENST00000558910 BLOC1S1P78537 153 aa8.09□□□□□ -1.11
TPM1-216ENST00000558910 TOR2AQ5JU69 321 aa8.09□□□□□ -1.11
TPM1-216ENST00000558910 DAZ4Q86SG3 579 aaKnown RBP8.09□□□□□ -1.11
TPM1-216ENST00000558910 NFE4Q86UQ8 179 aa8.09□□□□□ -1.11
TPM1-216ENST00000558910 FER1L6-AS1Q8NA97 138 aa8.09□□□□□ -1.11
TPM1-216ENST00000558910 KRTAP4-11Q9BYQ6 195 aa8.09□□□□□ -1.11
TPM1-216ENST00000558910 RNASE7Q9H1E1 156 aaKnown RBP8.09□□□□□ -1.11
TPM1-216ENST00000558910 DAZ3Q9NR90 486 aaKnown RBP8.09□□□□□ -1.11
TPM1-216ENST00000558910 HSPG2P98160 4391 aa8.08□□□□□ -1.12
TPM1-216ENST00000558910 TIRAPP58753 221 aa8.08□□□□□ -1.12
TPM1-216ENST00000558910 RPL36AP83881 106 aaKnown RBP8.08□□□□□ -1.12
TPM1-216ENST00000558910 LINC01556Q5JQF7 62 aa8.08□□□□□ -1.12
TPM1-216ENST00000558910 PIK3CD-AS1Q5SR53 167 aa8.08□□□□□ -1.12
TPM1-216ENST00000558910 C10orf126Q8N4M7 172 aa8.08□□□□□ -1.12
TPM1-216ENST00000558910 RPL36ALQ969Q0 106 aaKnown RBP8.08□□□□□ -1.12
TPM1-216ENST00000558910 EIF5A2Q9GZV4 153 aaKnown RBP8.08□□□□□ -1.12
TPM1-216ENST00000558910 A0A087WTM6 91 aa8.07□□□□□ -1.12
TPM1-216ENST00000558910 TMEM262E9PQX1 116 aa8.07□□□□□ -1.12
TPM1-216ENST00000558910 SNAI2O43623 268 aa8.07□□□□□ -1.12
TPM1-216ENST00000558910 LYZL1Q6UWQ5 148 aa8.07□□□□□ -1.12
TPM1-216ENST00000558910 NEXN-AS1Q8NBZ9 246 aa8.07□□□□□ -1.12
TPM1-216ENST00000558910 NUDT10Q8NFP7 164 aa8.07□□□□□ -1.12
TPM1-216ENST00000558910 OCC1Q8TAD7 63 aa8.07□□□□□ -1.12
TPM1-216ENST00000558910 NUDT11Q96G61 164 aa8.07□□□□□ -1.12
TPM1-216ENST00000558910 APOBP04114 4563 aaKnown RBP8.07□□□□□ -1.12
TPM1-216ENST00000558910 C19orf71A6NCJ1 209 aa8.06□□□□□ -1.12
TPM1-216ENST00000558910 K7EN84 100 aa8.06□□□□□ -1.12
TPM1-216ENST00000558910 LECT2O14960 151 aa8.06□□□□□ -1.12
TPM1-216ENST00000558910 OR5AL1P0C617 328 aa8.06□□□□□ -1.12
TPM1-216ENST00000558910 LINC00694P0DN24 101 aa8.06□□□□□ -1.12
TPM1-216ENST00000558910 BTF3P20290 206 aaKnown RBP8.06□□□□□ -1.12
TPM1-216ENST00000558910 RPS20P60866 119 aaKnown RBP8.06□□□□□ -1.12
TPM1-216ENST00000558910 DNAJC30Q96LL9 226 aa8.06□□□□□ -1.12
TPM1-216ENST00000558910 AP1S3Q96PC3 154 aa8.06□□□□□ -1.12
TPM1-216ENST00000558910 URGCP-MRPS24S4R325 110 aa8.06□□□□□ -1.12
TPM1-216ENST00000558910 XKRY2A2RUG3 117 aa8.05□□□□□ -1.12
TPM1-216ENST00000558910 IBA57-AS1B1ANH7 110 aa8.05□□□□□ -1.12
TPM1-216ENST00000558910 CXCL1P09341 107 aa8.05□□□□□ -1.12
TPM1-216ENST00000558910 RAB4BP61018 213 aa8.05□□□□□ -1.12
TPM1-216ENST00000558910 UBE2D3P61077 147 aa8.05□□□□□ -1.12
TPM1-216ENST00000558910 UBE2D2P62837 147 aa8.05□□□□□ -1.12
TPM1-216ENST00000558910 KLK12Q9UKR0 248 aa8.05□□□□□ -1.12
TPM1-216ENST00000558910 TRBV7-3A0A075B6L6 115 aa8.04□□□□□ -1.12
TPM1-216ENST00000558910 A0A087WX48 190 aa8.04□□□□□ -1.12
TPM1-216ENST00000558910 IGLC6P0CF74 106 aa8.04□□□□□ -1.12
TPM1-216ENST00000558910 TAGLN2P37802 199 aaKnown RBP8.04□□□□□ -1.12
TPM1-216ENST00000558910 TWIST1Q15672 202 aa8.04□□□□□ -1.12
TPM1-216ENST00000558910 KCNIP4Q6PIL6 250 aa8.04□□□□□ -1.12
TPM1-216ENST00000558910 CHCHD5Q9BSY4 110 aa8.04□□□□□ -1.12
TPM1-216ENST00000558910 RPP21Q9H633 154 aaKnown RBP8.04□□□□□ -1.12
TPM1-216ENST00000558910 BIN3Q9NQY0 253 aa8.04□□□□□ -1.12
TPM1-216ENST00000558910 IGKV2D-24A0A075B6R9 120 aa8.03□□□□□ -1.12
TPM1-216ENST00000558910 A0A087WWC5 75 aa8.03□□□□□ -1.12
TPM1-216ENST00000558910 TRBV10-1A0A0K0K1A3 114 aa8.03□□□□□ -1.12
TPM1-216ENST00000558910 GATCO43716 136 aaKnown RBP8.03□□□□□ -1.12
TPM1-216ENST00000558910 NTF3P20783 257 aa8.03□□□□□ -1.12
TPM1-216ENST00000558910 HAMPP81172 84 aa8.03□□□□□ -1.12
TPM1-216ENST00000558910 SUMO4Q6EEV6 95 aa8.03□□□□□ -1.12
TPM1-216ENST00000558910 MAPKAPK5-AS1Q8N8E1 139 aa8.03□□□□□ -1.12
TPM1-216ENST00000558910 UBE2WQ96B02 151 aa8.03□□□□□ -1.12
TPM1-216ENST00000558910 CACNG7P62955 275 aa8.02□□□□□ -1.13
TPM1-216ENST00000558910 GAGE6Q13070 117 aa8.02□□□□□ -1.13
TPM1-216ENST00000558910 CLPSL2Q6UWE3 100 aa8.02□□□□□ -1.13
TPM1-216ENST00000558910 NIT1Q86X76 327 aa8.02□□□□□ -1.13
TPM1-216ENST00000558910 C15orf54Q8N8G6 183 aa8.02□□□□□ -1.13
TPM1-216ENST00000558910 PGLYRP4Q96LB8 373 aa8.02□□□□□ -1.13
TPM1-216ENST00000558910 SMIM7Q9BQ49 75 aa8.02□□□□□ -1.13
TPM1-216ENST00000558910 CDIP1Q9H305 208 aa8.02□□□□□ -1.13
TPM1-216ENST00000558910 KIF25-AS1Q9Y6Z4 181 aa8.02□□□□□ -1.13
TPM1-216ENST00000558910 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.01□□□□□ -1.13
TPM1-216ENST00000558910 TRAV26-2A0A0B4J265 109 aa8.01□□□□□ -1.13
TPM1-216ENST00000558910 K7EP13 123 aa8.01□□□□□ -1.13
TPM1-216ENST00000558910 FOXA3P55318 350 aaPredicted RBP8.01□□□□□ -1.13
TPM1-216ENST00000558910 WFDC2Q14508 124 aa8.01□□□□□ -1.13
TPM1-216ENST00000558910 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.01□□□□□ -1.13
TPM1-216ENST00000558910 BAALCQ8WXS3 180 aa8.01□□□□□ -1.13
TPM1-216ENST00000558910 SMIM12Q96EX1 92 aa8.01□□□□□ -1.13
TPM1-216ENST00000558910 ABCA13Q86UQ4 5058 aa8.01□□□□□ -1.13
TPM1-216ENST00000558910 IGLV5-52A0A0A0MRZ9 124 aa8□□□□□ -1.13
TPM1-216ENST00000558910 TRBV6-8A0A0A6YYG3 113 aa8□□□□□ -1.13
TPM1-216ENST00000558910 ZNF727A8MUV8 499 aa8□□□□□ -1.13
TPM1-216ENST00000558910 F2Z2F3 143 aa8□□□□□ -1.13
TPM1-216ENST00000558910 TMEM250H0YL14 139 aa8□□□□□ -1.13
TPM1-216ENST00000558910 TRGC1P0CF51 173 aa8□□□□□ -1.13
TPM1-216ENST00000558910 KRTAP10-1P60331 282 aa8□□□□□ -1.13
TPM1-216ENST00000558910 Q8N976 141 aa8□□□□□ -1.13
TPM1-216ENST00000558910 OR10G8Q8NGN5 311 aa8□□□□□ -1.13
TPM1-216ENST00000558910 FAM210AQ96ND0 272 aa8□□□□□ -1.13
TPM1-216ENST00000558910 TM2D2Q9BX73 214 aa8□□□□□ -1.13
TPM1-216ENST00000558910 KRTAP4-5Q9BYR2 181 aa8□□□□□ -1.13
TPM1-216ENST00000558910 TRAV8-3A0A0A6YYJ7 113 aa7.99□□□□□ -1.13
TPM1-216ENST00000558910 ANGP03950 147 aaKnown RBP7.99□□□□□ -1.13
TPM1-216ENST00000558910 SRP19P09132 144 aaKnown RBP7.99□□□□□ -1.13
TPM1-216ENST00000558910 MPV17L2Q567V2 206 aa7.99□□□□□ -1.13
TPM1-216ENST00000558910 NTM-AS1Q6ZSK4 140 aa7.99□□□□□ -1.13
TPM1-216ENST00000558910 LYPD6BQ8NI32 183 aa7.99□□□□□ -1.13
TPM1-216ENST00000558910 GTSF1Q8WW33 167 aa7.99□□□□□ -1.13
TPM1-216ENST00000558910 DPH3P1Q9H4G8 78 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms