RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 CHCHD7Q9BUK0 85 aa8.8□□□□□ -1
VPS18-203ENST00000558855 UMAD1C9J7I0 102 aa8.79□□□□□ -1
VPS18-203ENST00000558855 PFDN1O60925 122 aa8.79□□□□□ -1
VPS18-203ENST00000558855 CIRBP-AS1Q8TBR5 109 aa8.79□□□□□ -1
VPS18-203ENST00000558855 TRBV20OR9-2A0A075B6H5 130 aa8.78□□□□□ -1
VPS18-203ENST00000558855 A0A0D9SG52 128 aa8.78□□□□□ -1
VPS18-203ENST00000558855 KANTRA0A1W2PQU2 76 aa8.78□□□□□ -1
VPS18-203ENST00000558855 RAB19A4D1S5 217 aa8.78□□□□□ -1
VPS18-203ENST00000558855 TMEM262E9PQX1 116 aa8.78□□□□□ -1
VPS18-203ENST00000558855 S100A9P06702 114 aaKnown RBP8.78□□□□□ -1
VPS18-203ENST00000558855 IGLC6P0CF74 106 aa8.78□□□□□ -1
VPS18-203ENST00000558855 CENPWQ5EE01 88 aa8.78□□□□□ -1
VPS18-203ENST00000558855 SPANXN1Q5VSR9 72 aa8.78□□□□□ -1
VPS18-203ENST00000558855 DEFB104AQ8WTQ1 72 aa8.78□□□□□ -1
VPS18-203ENST00000558855 RMI2Q96E14 147 aa8.78□□□□□ -1
VPS18-203ENST00000558855 CHAC1Q9BUX1 264 aa8.78□□□□□ -1
VPS18-203ENST00000558855 GNG13Q9P2W3 67 aa8.78□□□□□ -1
VPS18-203ENST00000558855 VAX2Q9UIW0 290 aa8.78□□□□□ -1
VPS18-203ENST00000558855 C19orf71A6NCJ1 209 aa8.77□□□□□ -1.01
VPS18-203ENST00000558855 USP17L23D6RBM5 183 aa8.77□□□□□ -1.01
VPS18-203ENST00000558855 PANO1I0J062 215 aa8.77□□□□□ -1.01
VPS18-203ENST00000558855 ANGP03950 147 aaKnown RBP8.77□□□□□ -1.01
VPS18-203ENST00000558855 GAGE6Q13070 117 aa8.77□□□□□ -1.01
VPS18-203ENST00000558855 CHCHD5Q9BSY4 110 aa8.77□□□□□ -1.01
VPS18-203ENST00000558855 GFRA4Q9GZZ7 299 aa8.77□□□□□ -1.01
VPS18-203ENST00000558855 COX11Q9Y6N1 276 aa8.77□□□□□ -1.01
VPS18-203ENST00000558855 F5H697 171 aa8.76□□□□□ -1.01
VPS18-203ENST00000558855 HLA-DQA1P01909 254 aa8.76□□□□□ -1.01
VPS18-203ENST00000558855 PLA2G1BP04054 148 aaKnown RBP8.76□□□□□ -1.01
VPS18-203ENST00000558855 PRSS1P07477 247 aa8.76□□□□□ -1.01
VPS18-203ENST00000558855 HNRNPA3P51991 378 aaKnown RBP8.76□□□□□ -1.01
VPS18-203ENST00000558855 RBX1P62877 108 aa8.76□□□□□ -1.01
VPS18-203ENST00000558855 C1orf43Q9BWL3 253 aa8.76□□□□□ -1.01
VPS18-203ENST00000558855 KRTAP29-1A8MX34 341 aaPredicted RBP8.75□□□□□ -1.01
VPS18-203ENST00000558855 M0QY20 66 aa8.75□□□□□ -1.01
VPS18-203ENST00000558855 MGPP08493 103 aa8.75□□□□□ -1.01
VPS18-203ENST00000558855 ELOBQ15370 118 aa8.75□□□□□ -1.01
VPS18-203ENST00000558855 SUMO4Q6EEV6 95 aa8.75□□□□□ -1.01
VPS18-203ENST00000558855 TPPP3Q9BW30 176 aa8.75□□□□□ -1.01
VPS18-203ENST00000558855 PRR34Q9NV39 138 aa8.75□□□□□ -1.01
VPS18-203ENST00000558855 TRAV1-1A0A0B4J248 108 aa8.74□□□□□ -1.01
VPS18-203ENST00000558855 Q0VG73 95 aa8.74□□□□□ -1.01
VPS18-203ENST00000558855 LINC00269Q8N2A0 174 aa8.74□□□□□ -1.01
VPS18-203ENST00000558855 OR2D3Q8NGH3 330 aa8.74□□□□□ -1.01
VPS18-203ENST00000558855 AP1S3Q96PC3 154 aa8.74□□□□□ -1.01
VPS18-203ENST00000558855 MANBALQ9NQG1 85 aa8.74□□□□□ -1.01
VPS18-203ENST00000558855 IGLV4-60A0A075B6I1 120 aa8.73□□□□□ -1.01
VPS18-203ENST00000558855 J3QL48 77 aa8.73□□□□□ -1.01
VPS18-203ENST00000558855 CRPP02741 224 aa8.73□□□□□ -1.01
VPS18-203ENST00000558855 FER1L6-AS1Q8NA97 138 aa8.73□□□□□ -1.01
VPS18-203ENST00000558855 C20orf203Q8NBC4 194 aa8.73□□□□□ -1.01
VPS18-203ENST00000558855 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.73□□□□□ -1.01
VPS18-203ENST00000558855 IGLV10-54A0A075B6I4 117 aa8.72□□□□□ -1.01
VPS18-203ENST00000558855 SULT1A2P50226 295 aa8.72□□□□□ -1.01
VPS18-203ENST00000558855 NKX2-5P52952 324 aaPredicted RBP8.72□□□□□ -1.01
VPS18-203ENST00000558855 IQCJQ1A5X6 159 aa8.72□□□□□ -1.01
VPS18-203ENST00000558855 KCNIP4Q6PIL6 250 aa8.72□□□□□ -1.01
VPS18-203ENST00000558855 UBR4Q5T4S7 5183 aa8.72□□□□□ -1.01
VPS18-203ENST00000558855 LYZL1Q6UWQ5 148 aa8.71□□□□□ -1.02
VPS18-203ENST00000558855 TRBV25-1A0A075B6N4 114 aa8.7□□□□□ -1.02
VPS18-203ENST00000558855 K7EN84 100 aa8.7□□□□□ -1.02
VPS18-203ENST00000558855 SMIM17P0DL12 118 aa8.7□□□□□ -1.02
VPS18-203ENST00000558855 MEF2BQ02080 365 aaPredicted RBP8.7□□□□□ -1.02
VPS18-203ENST00000558855 MIAQ16674 131 aa8.7□□□□□ -1.02
VPS18-203ENST00000558855 IGHV1-24A0A0C4DH33 117 aa8.69□□□□□ -1.02
VPS18-203ENST00000558855 SLPIP03973 132 aa8.69□□□□□ -1.02
VPS18-203ENST00000558855 GNG4P50150 75 aa8.69□□□□□ -1.02
VPS18-203ENST00000558855 EIF5AP63241 154 aaKnown RBP8.69□□□□□ -1.02
VPS18-203ENST00000558855 C9orf163Q8N9P6 203 aa8.69□□□□□ -1.02
VPS18-203ENST00000558855 DAZAP1Q96EP5 407 aaKnown RBP8.69□□□□□ -1.02
VPS18-203ENST00000558855 TRAV26-2A0A0B4J265 109 aa8.68□□□□□ -1.02
VPS18-203ENST00000558855 BCL2P10415 239 aa8.68□□□□□ -1.02
VPS18-203ENST00000558855 NTF3P20783 257 aa8.68□□□□□ -1.02
VPS18-203ENST00000558855 CTRLP40313 264 aa8.68□□□□□ -1.02
VPS18-203ENST00000558855 REG3AQ06141 175 aa8.68□□□□□ -1.02
VPS18-203ENST00000558855 C14orf177Q52M58 125 aa8.68□□□□□ -1.02
VPS18-203ENST00000558855 NUDT10Q8NFP7 164 aa8.68□□□□□ -1.02
VPS18-203ENST00000558855 NUDT11Q96G61 164 aa8.68□□□□□ -1.02
VPS18-203ENST00000558855 RNASE7Q9H1E1 156 aaKnown RBP8.68□□□□□ -1.02
VPS18-203ENST00000558855 MED9Q9NWA0 146 aa8.68□□□□□ -1.02
VPS18-203ENST00000558855 P01737 135 aa8.67□□□□□ -1.02
VPS18-203ENST00000558855 RAB5CP51148 216 aa8.67□□□□□ -1.02
VPS18-203ENST00000558855 FOXA3P55318 350 aaPredicted RBP8.67□□□□□ -1.02
VPS18-203ENST00000558855 RPS20P60866 119 aaKnown RBP8.67□□□□□ -1.02
VPS18-203ENST00000558855 CACNG7P62955 275 aa8.67□□□□□ -1.02
VPS18-203ENST00000558855 TMEM97Q5BJF2 176 aa8.67□□□□□ -1.02
VPS18-203ENST00000558855 RASL11AQ6T310 242 aa8.67□□□□□ -1.02
VPS18-203ENST00000558855 SDIM1Q6ZPB5 146 aa8.67□□□□□ -1.02
VPS18-203ENST00000558855 TNXBP22105 4242 aa8.66□□□□□ -1.02
VPS18-203ENST00000558855 CHTF8P0CG12 524 aa8.66□□□□□ -1.02
VPS18-203ENST00000558855 TCTE3Q8IZS6 198 aa8.66□□□□□ -1.02
VPS18-203ENST00000558855 GATD1Q8NB37 220 aa8.66□□□□□ -1.02
VPS18-203ENST00000558855 GTSF1Q8WW33 167 aa8.66□□□□□ -1.02
VPS18-203ENST00000558855 TMEM243Q9BU79 118 aa8.66□□□□□ -1.02
VPS18-203ENST00000558855 DPH3P1Q9H4G8 78 aa8.66□□□□□ -1.02
VPS18-203ENST00000558855 PDE6DO43924 150 aa8.65□□□□□ -1.02
VPS18-203ENST00000558855 IFNA1P01562 189 aa8.65□□□□□ -1.02
VPS18-203ENST00000558855 RPL37AP61513 92 aaKnown RBP8.65□□□□□ -1.02
VPS18-203ENST00000558855 PKIAP61925 76 aa8.65□□□□□ -1.02
VPS18-203ENST00000558855 C9orf62Q8N4C0 152 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 220.1 ms