RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 GAGE1Q13065 139 aa5.32□□□□□ -1.56
TDP1-214ENST00000556063 GAGE4Q13068 117 aa5.32□□□□□ -1.56
TDP1-214ENST00000556063 GAGE5Q13069 117 aa5.32□□□□□ -1.56
TDP1-214ENST00000556063 COX19Q49B96 90 aa5.32□□□□□ -1.56
TDP1-214ENST00000556063 GAGE13Q4V321 117 aa5.32□□□□□ -1.56
TDP1-214ENST00000556063 ATP6V0E2Q8NHE4 81 aa5.32□□□□□ -1.56
TDP1-214ENST00000556063 MRAP2Q96G30 205 aa5.32□□□□□ -1.56
TDP1-214ENST00000556063 TNFRSF18Q9Y5U5 241 aa5.32□□□□□ -1.56
TDP1-214ENST00000556063 HUWE1Q7Z6Z7 4374 aaKnown RBP5.32□□□□□ -1.56
TDP1-214ENST00000556063 A0A1B0GXF2 115 aa5.31□□□□□ -1.56
TDP1-214ENST00000556063 M0QY20 66 aa5.31□□□□□ -1.56
TDP1-214ENST00000556063 TMEM97Q5BJF2 176 aa5.31□□□□□ -1.56
TDP1-214ENST00000556063 FAM104BQ5XKR9 115 aa5.31□□□□□ -1.56
TDP1-214ENST00000556063 LGALS9CQ6DKI2 356 aa5.31□□□□□ -1.56
TDP1-214ENST00000556063 SUMO4Q6EEV6 95 aa5.31□□□□□ -1.56
TDP1-214ENST00000556063 AMN1Q8IY45 258 aa5.31□□□□□ -1.56
TDP1-214ENST00000556063 ZNRF2Q8NHG8 242 aa5.31□□□□□ -1.56
TDP1-214ENST00000556063 NIT2Q9NQR4 276 aa5.31□□□□□ -1.56
TDP1-214ENST00000556063 URGCP-MRPS24S4R325 110 aa5.31□□□□□ -1.56
TDP1-214ENST00000556063 LOC100131303A0A0U1RQF7 123 aa5.3□□□□□ -1.56
TDP1-214ENST00000556063 LY6G6CO95867 125 aa5.3□□□□□ -1.56
TDP1-214ENST00000556063 PPBPP02775 128 aa5.3□□□□□ -1.56
TDP1-214ENST00000556063 RAB4AP20338 218 aa5.3□□□□□ -1.56
TDP1-214ENST00000556063 TIRAPP58753 221 aa5.3□□□□□ -1.56
TDP1-214ENST00000556063 DAZ4Q86SG3 579 aaKnown RBP5.3□□□□□ -1.56
TDP1-214ENST00000556063 GATD1Q8NB37 220 aa5.3□□□□□ -1.56
TDP1-214ENST00000556063 GTSF1LQ9H1H1 148 aa5.3□□□□□ -1.56
TDP1-214ENST00000556063 DAZ3Q9NR90 486 aaKnown RBP5.3□□□□□ -1.56
TDP1-214ENST00000556063 SMCO4Q9NRQ5 59 aa5.3□□□□□ -1.56
TDP1-214ENST00000556063 TRAV8-6A0A0B4J262 113 aa5.29□□□□□ -1.56
TDP1-214ENST00000556063 HLA-DQA1P01909 254 aa5.29□□□□□ -1.56
TDP1-214ENST00000556063 MT-ND6P03923 174 aa5.29□□□□□ -1.56
TDP1-214ENST00000556063 S100A1P23297 94 aa5.29□□□□□ -1.56
TDP1-214ENST00000556063 CKS2P33552 79 aa5.29□□□□□ -1.56
TDP1-214ENST00000556063 UBE2D3P61077 147 aa5.29□□□□□ -1.56
TDP1-214ENST00000556063 UBE2D2P62837 147 aa5.29□□□□□ -1.56
TDP1-214ENST00000556063 ESRGQ1W209 222 aa5.29□□□□□ -1.56
TDP1-214ENST00000556063 OR10J3Q5JRS4 329 aa5.29□□□□□ -1.56
TDP1-214ENST00000556063 LYPD5Q6UWN5 251 aa5.29□□□□□ -1.56
TDP1-214ENST00000556063 NEXN-AS1Q8NBZ9 246 aa5.29□□□□□ -1.56
TDP1-214ENST00000556063 LINC00476Q8WZB0 136 aa5.29□□□□□ -1.56
TDP1-214ENST00000556063 RNF185Q96GF1 192 aa5.29□□□□□ -1.56
TDP1-214ENST00000556063 MRPS16Q9Y3D3 137 aaKnown RBP5.29□□□□□ -1.56
TDP1-214ENST00000556063 TRBV24-1A0A075B6N3 115 aa5.28□□□□□ -1.56
TDP1-214ENST00000556063 TRAV26-2A0A0B4J265 109 aa5.28□□□□□ -1.56
TDP1-214ENST00000556063 TRBV6-5A0A0K0K1A5 114 aa5.28□□□□□ -1.56
TDP1-214ENST00000556063 LCE6AA0A183 80 aa5.28□□□□□ -1.56
TDP1-214ENST00000556063 LINC00694P0DN24 101 aa5.28□□□□□ -1.56
TDP1-214ENST00000556063 MRPL51Q4U2R6 128 aaKnown RBP5.28□□□□□ -1.56
TDP1-214ENST00000556063 LELP1Q5T871 98 aa5.28□□□□□ -1.56
TDP1-214ENST00000556063 TMEM136Q6ZRR5 245 aa5.28□□□□□ -1.56
TDP1-214ENST00000556063 ORMDL3Q8N138 153 aa5.28□□□□□ -1.56
TDP1-214ENST00000556063 GNB1LQ9BYB4 327 aa5.28□□□□□ -1.56
TDP1-214ENST00000556063 ST20Q9HBF5 79 aa5.28□□□□□ -1.56
TDP1-214ENST00000556063 LINC00588Q9Y4M8 146 aa5.28□□□□□ -1.56
TDP1-214ENST00000556063 SDHAF1A6NFY7 115 aa5.27□□□□□ -1.57
TDP1-214ENST00000556063 PHOX2AO14813 284 aa5.27□□□□□ -1.57
TDP1-214ENST00000556063 APCSP02743 223 aa5.27□□□□□ -1.57
TDP1-214ENST00000556063 PKIAP61925 76 aa5.27□□□□□ -1.57
TDP1-214ENST00000556063 COTL1Q14019 142 aa5.27□□□□□ -1.57
TDP1-214ENST00000556063 ELOBQ15370 118 aa5.27□□□□□ -1.57
TDP1-214ENST00000556063 ATRAIDQ6UW56 229 aa5.27□□□□□ -1.57
TDP1-214ENST00000556063 RPL39LQ96EH5 51 aaKnown RBP5.27□□□□□ -1.57
TDP1-214ENST00000556063 C20orf78Q9BR46 151 aa5.27□□□□□ -1.57
TDP1-214ENST00000556063 UPK3BQ9BT76 320 aa5.27□□□□□ -1.57
TDP1-214ENST00000556063 Q9UF83 564 aa5.27□□□□□ -1.57
TDP1-214ENST00000556063 LAMTOR2Q9Y2Q5 125 aa5.27□□□□□ -1.57
TDP1-214ENST00000556063 TENM2Q9NT68 2774 aa5.27□□□□□ -1.57
TDP1-214ENST00000556063 TRAV9-2A0A087WT02 112 aa5.26□□□□□ -1.57
TDP1-214ENST00000556063 TRBV6-8A0A0A6YYG3 113 aa5.26□□□□□ -1.57
TDP1-214ENST00000556063 TGIF2-C20orf24A0A0A6YYL0 155 aa5.26□□□□□ -1.57
TDP1-214ENST00000556063 D6R8Y8 96 aa5.26□□□□□ -1.57
TDP1-214ENST00000556063 I3L3M4 83 aa5.26□□□□□ -1.57
TDP1-214ENST00000556063 VCYO14598 125 aa5.26□□□□□ -1.57
TDP1-214ENST00000556063 TCAPO15273 167 aa5.26□□□□□ -1.57
TDP1-214ENST00000556063 NCR2O95944 276 aa5.26□□□□□ -1.57
TDP1-214ENST00000556063 PMCHP20382 165 aa5.26□□□□□ -1.57
TDP1-214ENST00000556063 SUMO2P61956 95 aaKnown RBP5.26□□□□□ -1.57
TDP1-214ENST00000556063 PRELID3AQ96N28 172 aa5.26□□□□□ -1.57
TDP1-214ENST00000556063 TRBV25-1A0A075B6N4 114 aa5.25□□□□□ -1.57
TDP1-214ENST00000556063 IGHV1-24A0A0C4DH33 117 aa5.25□□□□□ -1.57
TDP1-214ENST00000556063 IGHV3-38A0A0C4DH36 116 aa5.25□□□□□ -1.57
TDP1-214ENST00000556063 SMKR1H3BMG3 65 aa5.25□□□□□ -1.57
TDP1-214ENST00000556063 K7EP13 123 aa5.25□□□□□ -1.57
TDP1-214ENST00000556063 SIVA1O15304 175 aa5.25□□□□□ -1.57
TDP1-214ENST00000556063 TNFRSF6BO95407 300 aa5.25□□□□□ -1.57
TDP1-214ENST00000556063 RPS10P46783 165 aaKnown RBP5.25□□□□□ -1.57
TDP1-214ENST00000556063 RPL32P62910 135 aaKnown RBP5.25□□□□□ -1.57
TDP1-214ENST00000556063 FABP9Q0Z7S8 132 aa5.25□□□□□ -1.57
TDP1-214ENST00000556063 TTC32Q5I0X7 151 aa5.25□□□□□ -1.57
TDP1-214ENST00000556063 CBLN2Q8IUK8 224 aa5.25□□□□□ -1.57
TDP1-214ENST00000556063 NRACQ8N912 160 aa5.25□□□□□ -1.57
TDP1-214ENST00000556063 KIR2DL4Q99706 377 aa5.25□□□□□ -1.57
TDP1-214ENST00000556063 TMEM70Q9BUB7 260 aa5.25□□□□□ -1.57
TDP1-214ENST00000556063 MRPL18Q9H0U6 180 aaKnown RBP5.25□□□□□ -1.57
TDP1-214ENST00000556063 Q9H8V8 135 aa5.25□□□□□ -1.57
TDP1-214ENST00000556063 TRAPPC1Q9Y5R8 145 aa5.25□□□□□ -1.57
TDP1-214ENST00000556063 A0A087WX48 190 aa5.24□□□□□ -1.57
TDP1-214ENST00000556063 TRBV27A0A0K0K1C4 114 aa5.24□□□□□ -1.57
TDP1-214ENST00000556063 ATP6V1G1O75348 118 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms