RNA–Protein interactions for RNA: ENST00000555164.2

KTN1-219, Transcript of kinectin 1, humanhuman

TSL 4

Gene KTN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-219ENST00000555164 IFT140Q96RY7 1462 aa0.72□□□□□ -2.29
KTN1-219ENST00000555164 FRAS1Q86XX4 4008 aa0.72□□□□□ -2.29
KTN1-219ENST00000555164 KIAA0100Q14667 2235 aaKnown RBP0.71□□□□□ -2.3
KTN1-219ENST00000555164 SPAARA0A1B0GVQ0 90 aa0.71□□□□□ -2.3
KTN1-219ENST00000555164 FAM74A4Q5TZK3 123 aa0.71□□□□□ -2.3
KTN1-219ENST00000555164 Q8N8P6 123 aa0.71□□□□□ -2.3
KTN1-219ENST00000555164 COPS9Q8WXC6 57 aa0.71□□□□□ -2.3
KTN1-219ENST00000555164 V9GYV3 84 aa0.71□□□□□ -2.3
KTN1-219ENST00000555164 APCP25054 2843 aa0.71□□□□□ -2.3
KTN1-219ENST00000555164 CUL7Q14999 1698 aa0.71□□□□□ -2.3
KTN1-219ENST00000555164 ABCA1O95477 2261 aa0.71□□□□□ -2.3
KTN1-219ENST00000555164 KNTC1P50748 2209 aa0.7□□□□□ -2.3
KTN1-219ENST00000555164 MYH8P13535 1937 aa0.7□□□□□ -2.3
KTN1-219ENST00000555164 TRBV7-1A0A0A6YYK4 115 aa0.7□□□□□ -2.3
KTN1-219ENST00000555164 TRBV10-3A0A0K0K1G6 114 aa0.7□□□□□ -2.3
KTN1-219ENST00000555164 MCRIP1C9JLW8 97 aa0.7□□□□□ -2.3
KTN1-219ENST00000555164 CCL8P80075 99 aa0.7□□□□□ -2.3
KTN1-219ENST00000555164 SPATA8Q6RVD6 105 aa0.7□□□□□ -2.3
KTN1-219ENST00000555164 ZNF818PQ6ZRF7 136 aa0.7□□□□□ -2.3
KTN1-219ENST00000555164 NAA60Q9H7X0 242 aa0.7□□□□□ -2.3
KTN1-219ENST00000555164 SSC5DA1L4H1 1573 aa0.7□□□□□ -2.3
KTN1-219ENST00000555164 ARAP2Q8WZ64 1704 aa0.69□□□□□ -2.3
KTN1-219ENST00000555164 MUC5BQ9HC84 5762 aaPredicted RBP0.69□□□□□ -2.3
KTN1-219ENST00000555164 DOCK2Q92608 1830 aa0.69□□□□□ -2.3
KTN1-219ENST00000555164 LRRC37A3O60309 1634 aa0.69□□□□□ -2.3
KTN1-219ENST00000555164 GVQW2A0A096LPI5 108 aaPredicted RBP0.69□□□□□ -2.3
KTN1-219ENST00000555164 EDDM3BP56851 147 aa0.69□□□□□ -2.3
KTN1-219ENST00000555164 NAIPQ13075 1403 aa0.69□□□□□ -2.3
KTN1-219ENST00000555164 CASKIN1Q8WXD9 1431 aa0.69□□□□□ -2.3
KTN1-219ENST00000555164 NCOA3Q9Y6Q9 1424 aa0.69□□□□□ -2.3
KTN1-219ENST00000555164 PRDM2Q13029 1718 aa0.69□□□□□ -2.3
KTN1-219ENST00000555164 INSL4Q14641 139 aa0.68□□□□□ -2.3
KTN1-219ENST00000555164 Q56UQ5 140 aa0.68□□□□□ -2.3
KTN1-219ENST00000555164 C12orf73Q69YU5 71 aa0.68□□□□□ -2.3
KTN1-219ENST00000555164 PP6455Q8WZ26 134 aa0.68□□□□□ -2.3
KTN1-219ENST00000555164 PEG3Q9GZU2 1588 aa0.68□□□□□ -2.3
KTN1-219ENST00000555164 LINC00312Q9Y6C7 94 aa0.68□□□□□ -2.3
KTN1-219ENST00000555164 CDK13Q14004 1512 aaKnown RBP0.68□□□□□ -2.3
KTN1-219ENST00000555164 A2ML1A8K2U0 1454 aa0.67□□□□□ -2.3
KTN1-219ENST00000555164 LINC00587B1AMM8 73 aa0.67□□□□□ -2.3
KTN1-219ENST00000555164 HCG22E2RYF7 251 aa0.67□□□□□ -2.3
KTN1-219ENST00000555164 SIX6O95475 246 aa0.67□□□□□ -2.3
KTN1-219ENST00000555164 SPINK7P58062 85 aa0.67□□□□□ -2.3
KTN1-219ENST00000555164 RBM3P98179 157 aaKnown RBP0.67□□□□□ -2.3
KTN1-219ENST00000555164 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.67□□□□□ -2.3
KTN1-219ENST00000555164 C2orf88Q9BSF0 95 aa0.67□□□□□ -2.3
KTN1-219ENST00000555164 SCN3BQ9NY72 215 aa0.67□□□□□ -2.3
KTN1-219ENST00000555164 ROBO1Q9Y6N7 1651 aa0.67□□□□□ -2.3
KTN1-219ENST00000555164 APOC4-APOC2K7ER74 178 aa0.66□□□□□ -2.3
KTN1-219ENST00000555164 WFDC6Q9BQY6 131 aa0.66□□□□□ -2.3
KTN1-219ENST00000555164 IFT172Q9UG01 1749 aa0.65□□□□□ -2.31
KTN1-219ENST00000555164 TRGV1A0A0A0MS02 117 aa0.65□□□□□ -2.31
KTN1-219ENST00000555164 F2Z2F3 143 aa0.65□□□□□ -2.31
KTN1-219ENST00000555164 AKAIN1P0CW23 69 aa0.65□□□□□ -2.31
KTN1-219ENST00000555164 SMIM11BQ8TCY0 68 aa0.65□□□□□ -2.31
KTN1-219ENST00000555164 BPESC1Q9GZL8 116 aa0.65□□□□□ -2.31
KTN1-219ENST00000555164 PXDNQ92626 1479 aa0.65□□□□□ -2.31
KTN1-219ENST00000555164 F5P12259 2224 aa0.64□□□□□ -2.31
KTN1-219ENST00000555164 TRAV13-2A0A0B4J235 113 aa0.64□□□□□ -2.31
KTN1-219ENST00000555164 PLAC8Q9NZF1 115 aa0.64□□□□□ -2.31
KTN1-219ENST00000555164 WDR7Q9Y4E6 1490 aa0.64□□□□□ -2.31
KTN1-219ENST00000555164 SHROOM2Q13796 1616 aa0.64□□□□□ -2.31
KTN1-219ENST00000555164 EIF4G3O43432 1585 aaKnown RBP0.63□□□□□ -2.31
KTN1-219ENST00000555164 LAMC3Q9Y6N6 1575 aa0.63□□□□□ -2.31
KTN1-219ENST00000555164 MIF4GDA9UHW6 222 aaKnown RBP0.63□□□□□ -2.31
KTN1-219ENST00000555164 APOC2P02655 101 aa0.63□□□□□ -2.31
KTN1-219ENST00000555164 ACYP2P14621 99 aa0.63□□□□□ -2.31
KTN1-219ENST00000555164 VMO1Q7Z5L0 202 aa0.63□□□□□ -2.31
KTN1-219ENST00000555164 PRR15LQ9BU68 103 aa0.63□□□□□ -2.31
KTN1-219ENST00000555164 ZMYM4Q5VZL5 1548 aa0.63□□□□□ -2.31
KTN1-219ENST00000555164 KCPQ6ZWJ8 1503 aa0.63□□□□□ -2.31
KTN1-219ENST00000555164 SMG6Q86US8 1419 aaKnown RBP0.63□□□□□ -2.31
KTN1-219ENST00000555164 MYOM2P54296 1465 aa0.62□□□□□ -2.31
KTN1-219ENST00000555164 GOLGA3Q08378 1498 aa0.62□□□□□ -2.31
KTN1-219ENST00000555164 CATR1Q13166 79 aa0.62□□□□□ -2.31
KTN1-219ENST00000555164 PIGBOS1A0A0B4J2F0 54 aa0.61□□□□□ -2.31
KTN1-219ENST00000555164 TMEM14DPA8MWL7 114 aa0.61□□□□□ -2.31
KTN1-219ENST00000555164 OOSP1A8MZH6 123 aa0.61□□□□□ -2.31
KTN1-219ENST00000555164 TNFP01375 233 aa0.61□□□□□ -2.31
KTN1-219ENST00000555164 PRH1P02810 166 aa0.61□□□□□ -2.31
KTN1-219ENST00000555164 KRTAP2-3P0C7H8 128 aa0.61□□□□□ -2.31
KTN1-219ENST00000555164 Q6ZRX8 168 aa0.61□□□□□ -2.31
KTN1-219ENST00000555164 PPP3R2Q96LZ3 170 aa0.61□□□□□ -2.31
KTN1-219ENST00000555164 KRTAP2-4Q9BYR9 128 aa0.61□□□□□ -2.31
KTN1-219ENST00000555164 KRTAP2-1Q9BYU5 128 aa0.61□□□□□ -2.31
KTN1-219ENST00000555164 CPSF1Q10570 1443 aaKnown RBP0.61□□□□□ -2.31
KTN1-219ENST00000555164 PSME4Q14997 1843 aa0.61□□□□□ -2.31
KTN1-219ENST00000555164 RIMS1Q86UR5 1692 aaKnown RBP0.6□□□□□ -2.31
KTN1-219ENST00000555164 CORTO00230 105 aa0.6□□□□□ -2.31
KTN1-219ENST00000555164 Q5VV11 94 aa0.6□□□□□ -2.31
KTN1-219ENST00000555164 SPANXDQ9BXN6 97 aa0.6□□□□□ -2.31
KTN1-219ENST00000555164 DOCK11Q5JSL3 2073 aa0.6□□□□□ -2.31
KTN1-219ENST00000555164 PPIP5K1Q6PFW1 1433 aa0.59□□□□□ -2.31
KTN1-219ENST00000555164 TRAV1-2A0A0B4J238 106 aa0.59□□□□□ -2.31
KTN1-219ENST00000555164 F6UZH7 168 aa0.59□□□□□ -2.31
KTN1-219ENST00000555164 IFNGP01579 166 aa0.59□□□□□ -2.31
KTN1-219ENST00000555164 CCL18P55774 89 aa0.59□□□□□ -2.31
KTN1-219ENST00000555164 TMEM203Q969S6 136 aa0.59□□□□□ -2.31
KTN1-219ENST00000555164 AQP10Q96PS8 301 aa0.59□□□□□ -2.31
KTN1-219ENST00000555164 SCP2D1Q9UJQ7 156 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms