RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 ABCA3Q99758 1704 aa2.19□□□□□ -2.06
VRK1-203ENST00000555067 RREB1Q92766 1687 aa2.18□□□□□ -2.06
VRK1-203ENST00000555067 SSSCA1O60232 199 aa2.18□□□□□ -2.06
VRK1-203ENST00000555067 UBE2D1P51668 147 aa2.18□□□□□ -2.06
VRK1-203ENST00000555067 CCL8P80075 99 aa2.18□□□□□ -2.06
VRK1-203ENST00000555067 CYP2G1PQ6ZSU1 146 aa2.18□□□□□ -2.06
VRK1-203ENST00000555067 ESPL1Q14674 2120 aa2.18□□□□□ -2.06
VRK1-203ENST00000555067 DOCK1Q14185 1865 aa2.18□□□□□ -2.06
VRK1-203ENST00000555067 ABCA4P78363 2273 aa2.17□□□□□ -2.06
VRK1-203ENST00000555067 TNS1Q9HBL0 1735 aaKnown RBP2.17□□□□□ -2.06
VRK1-203ENST00000555067 IGKV3D-7A0A0C4DH55 119 aa2.17□□□□□ -2.06
VRK1-203ENST00000555067 IGKV3OR2-268A0A0C4DH90 116 aa2.17□□□□□ -2.06
VRK1-203ENST00000555067 NBDYA0A0U1RRE5 68 aa2.17□□□□□ -2.06
VRK1-203ENST00000555067 IGKV2-29A2NJV5 120 aaPredicted RBP2.17□□□□□ -2.06
VRK1-203ENST00000555067 FXYD4P59646 89 aa2.17□□□□□ -2.06
VRK1-203ENST00000555067 LINC00474Q9P2X8 69 aa2.17□□□□□ -2.06
VRK1-203ENST00000555067 SCAPERQ9BY12 1400 aa2.17□□□□□ -2.06
VRK1-203ENST00000555067 MT-ATP8P03928 68 aa2.16□□□□□ -2.06
VRK1-203ENST00000555067 UBA52P62987 128 aaKnown RBP2.16□□□□□ -2.06
VRK1-203ENST00000555067 FXYD3Q14802 87 aa2.16□□□□□ -2.06
VRK1-203ENST00000555067 DEFB132Q7Z7B7 95 aa2.16□□□□□ -2.06
VRK1-203ENST00000555067 CYSTM1Q9H1C7 97 aa2.16□□□□□ -2.06
VRK1-203ENST00000555067 ABCC5O15440 1437 aa2.16□□□□□ -2.06
VRK1-203ENST00000555067 E9PCH4 1651 aa2.15□□□□□ -2.06
VRK1-203ENST00000555067 NRXN2Q9P2S2 1712 aa2.15□□□□□ -2.07
VRK1-203ENST00000555067 PVALEFA0A1B0GWK0 134 aa2.15□□□□□ -2.07
VRK1-203ENST00000555067 SIX6O95475 246 aa2.15□□□□□ -2.07
VRK1-203ENST00000555067 ZNF818PQ6ZRF7 136 aa2.15□□□□□ -2.07
VRK1-203ENST00000555067 TOPAZ1Q8N9V7 1692 aa2.15□□□□□ -2.07
VRK1-203ENST00000555067 ADGRL2O95490 1459 aa2.14□□□□□ -2.07
VRK1-203ENST00000555067 TEX14Q8IWB6 1497 aa2.14□□□□□ -2.07
VRK1-203ENST00000555067 KDM6BO15054 1643 aa2.14□□□□□ -2.07
VRK1-203ENST00000555067 TEX49A0A1B0GTD5 131 aa2.14□□□□□ -2.07
VRK1-203ENST00000555067 H3BQ15 152 aa2.14□□□□□ -2.07
VRK1-203ENST00000555067 C4orf33Q8N1A6 199 aa2.14□□□□□ -2.07
VRK1-203ENST00000555067 C20orf197Q8N268 126 aa2.14□□□□□ -2.07
VRK1-203ENST00000555067 DPY30Q9C005 99 aa2.14□□□□□ -2.07
VRK1-203ENST00000555067 LINC00312Q9Y6C7 94 aa2.14□□□□□ -2.07
VRK1-203ENST00000555067 COL4A1P02462 1669 aa2.14□□□□□ -2.07
VRK1-203ENST00000555067 TROQ12816 1431 aaPredicted RBP2.14□□□□□ -2.07
VRK1-203ENST00000555067 PRDM2Q13029 1718 aa2.14□□□□□ -2.07
VRK1-203ENST00000555067 FYCO1Q9BQS8 1478 aa2.14□□□□□ -2.07
VRK1-203ENST00000555067 PHIPQ8WWQ0 1821 aa2.13□□□□□ -2.07
VRK1-203ENST00000555067 CLPSL1A2RUU4 121 aa2.13□□□□□ -2.07
VRK1-203ENST00000555067 XAF1Q6GPH4 301 aa2.13□□□□□ -2.07
VRK1-203ENST00000555067 C5orf56Q8N8D9 126 aa2.13□□□□□ -2.07
VRK1-203ENST00000555067 TSLPQ969D9 159 aa2.13□□□□□ -2.07
VRK1-203ENST00000555067 AP4S1Q9Y587 144 aa2.13□□□□□ -2.07
VRK1-203ENST00000555067 AFDNP55196 1824 aaKnown RBP2.12□□□□□ -2.07
VRK1-203ENST00000555067 PLXNA1Q9UIW2 1896 aa2.12□□□□□ -2.07
VRK1-203ENST00000555067 BLMP54132 1417 aaPredicted RBP2.12□□□□□ -2.07
VRK1-203ENST00000555067 CYP4F30PQ9H0H9 118 aa2.12□□□□□ -2.07
VRK1-203ENST00000555067 PARP14Q460N5 1801 aa2.12□□□□□ -2.07
VRK1-203ENST00000555067 MED13Q9UHV7 2174 aa2.12□□□□□ -2.07
VRK1-203ENST00000555067 TET3O43151 1660 aa2.12□□□□□ -2.07
VRK1-203ENST00000555067 PPIP5K1Q6PFW1 1433 aa2.11□□□□□ -2.07
VRK1-203ENST00000555067 IGKV2-40A0A087WW87 121 aaPredicted RBP2.11□□□□□ -2.07
VRK1-203ENST00000555067 IGKV2D-40P01614 121 aaPredicted RBP2.11□□□□□ -2.07
VRK1-203ENST00000555067 CCL3L1P16619 93 aa2.11□□□□□ -2.07
VRK1-203ENST00000555067 GNG11P61952 73 aa2.11□□□□□ -2.07
VRK1-203ENST00000555067 MYOZ3Q8TDC0 251 aa2.11□□□□□ -2.07
VRK1-203ENST00000555067 LINC00208Q96KT6 92 aa2.11□□□□□ -2.07
VRK1-203ENST00000555067 VAMP8Q9BV40 100 aa2.11□□□□□ -2.07
VRK1-203ENST00000555067 Q9H521 79 aa2.11□□□□□ -2.07
VRK1-203ENST00000555067 PRRC2BQ5JSZ5 2229 aaKnown RBP2.11□□□□□ -2.07
VRK1-203ENST00000555067 CHD1O14646 1710 aa2.11□□□□□ -2.07
VRK1-203ENST00000555067 SPTBP11277 2137 aa2.11□□□□□ -2.07
VRK1-203ENST00000555067 MED12Q93074 2177 aa2.1□□□□□ -2.07
VRK1-203ENST00000555067 DOCK2Q92608 1830 aa2.1□□□□□ -2.07
VRK1-203ENST00000555067 ARFGEF1Q9Y6D6 1849 aa2.1□□□□□ -2.07
VRK1-203ENST00000555067 NSD3Q9BZ95 1437 aa2.1□□□□□ -2.07
VRK1-203ENST00000555067 GAPVD1Q14C86 1478 aa2.1□□□□□ -2.07
VRK1-203ENST00000555067 CACNA1BQ00975 2339 aa2.1□□□□□ -2.07
VRK1-203ENST00000555067 TRBV7-1A0A0A6YYK4 115 aa2.1□□□□□ -2.07
VRK1-203ENST00000555067 hADV29S1A0JD25 119 aa2.1□□□□□ -2.07
VRK1-203ENST00000555067 GNGT2O14610 69 aa2.1□□□□□ -2.07
VRK1-203ENST00000555067 LINC00032P0C843 101 aa2.1□□□□□ -2.07
VRK1-203ENST00000555067 C10orf128Q5T292 105 aa2.1□□□□□ -2.07
VRK1-203ENST00000555067 C9orf62Q8N4C0 152 aa2.1□□□□□ -2.07
VRK1-203ENST00000555067 FAM213BQ8TBF2 198 aa2.1□□□□□ -2.07
VRK1-203ENST00000555067 GOLGA3Q08378 1498 aa2.09□□□□□ -2.07
VRK1-203ENST00000555067 KIAA1551Q9HCM1 1747 aa2.09□□□□□ -2.07
VRK1-203ENST00000555067 SSBP1Q04837 148 aaKnown RBP2.09□□□□□ -2.07
VRK1-203ENST00000555067 COX7B2Q8TF08 81 aa2.09□□□□□ -2.07
VRK1-203ENST00000555067 V9GYS6 101 aa2.09□□□□□ -2.07
VRK1-203ENST00000555067 BAZ1AQ9NRL2 1556 aaPredicted RBP2.09□□□□□ -2.08
VRK1-203ENST00000555067 DLG5Q8TDM6 1919 aa2.09□□□□□ -2.08
VRK1-203ENST00000555067 PEAK1Q9H792 1746 aa2.08□□□□□ -2.08
VRK1-203ENST00000555067 SHANK2Q9UPX8 1470 aa2.08□□□□□ -2.08
VRK1-203ENST00000555067 FXYD1O00168 92 aa2.08□□□□□ -2.08
VRK1-203ENST00000555067 MAGI1Q96QZ7 1491 aaPredicted RBP2.07□□□□□ -2.08
VRK1-203ENST00000555067 LAMC3Q9Y6N6 1575 aa2.07□□□□□ -2.08
VRK1-203ENST00000555067 ZNF56Q15929 161 aa2.07□□□□□ -2.08
VRK1-203ENST00000555067 Q6ZQY7 126 aa2.07□□□□□ -2.08
VRK1-203ENST00000555067 Q86TA4 180 aa2.07□□□□□ -2.08
VRK1-203ENST00000555067 CCL19Q99731 98 aa2.07□□□□□ -2.08
VRK1-203ENST00000555067 PMCHL2Q9BQD1 86 aa2.07□□□□□ -2.08
VRK1-203ENST00000555067 ANKRD36BQ8N2N9 1353 aa2.07□□□□□ -2.08
VRK1-203ENST00000555067 TCHHQ07283 1943 aa2.07□□□□□ -2.08
VRK1-203ENST00000555067 TANC1Q9C0D5 1861 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms