RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 XP32Q5T750 250 aa8.36□□□□□ -1.07
SYNE2-214ENST00000554928 Q6ZRN7 208 aaPredicted RBP8.36□□□□□ -1.07
SYNE2-214ENST00000554928 LINC00336Q6ZUF6 198 aa8.36□□□□□ -1.07
SYNE2-214ENST00000554928 CNFNQ9BYD5 112 aa8.36□□□□□ -1.07
SYNE2-214ENST00000554928 OSTCQ9NRP0 149 aa8.36□□□□□ -1.07
SYNE2-214ENST00000554928 TRBV10-1A0A0K0K1A3 114 aa8.35□□□□□ -1.07
SYNE2-214ENST00000554928 M0QY20 66 aa8.35□□□□□ -1.07
SYNE2-214ENST00000554928 IGHV3-30P01768 117 aa8.35□□□□□ -1.07
SYNE2-214ENST00000554928 IGHV3-33P01772 117 aa8.35□□□□□ -1.07
SYNE2-214ENST00000554928 IGHV3-30-3P0DP02 117 aa8.35□□□□□ -1.07
SYNE2-214ENST00000554928 IGHV3-30-5P0DP03 117 aa8.35□□□□□ -1.07
SYNE2-214ENST00000554928 TWIST1Q15672 202 aa8.35□□□□□ -1.07
SYNE2-214ENST00000554928 FAM74A3Q4VXF1 159 aa8.35□□□□□ -1.07
SYNE2-214ENST00000554928 CLLU1Q5K131 121 aa8.35□□□□□ -1.07
SYNE2-214ENST00000554928 OR10G8Q8NGN5 311 aa8.35□□□□□ -1.07
SYNE2-214ENST00000554928 NAT8Q9UHE5 227 aa8.35□□□□□ -1.07
SYNE2-214ENST00000554928 KIAA1109Q2LD37 5005 aa8.35□□□□□ -1.07
SYNE2-214ENST00000554928 TRBV7-3A0A075B6L6 115 aa8.34□□□□□ -1.07
SYNE2-214ENST00000554928 A8MWL6 223 aa8.34□□□□□ -1.07
SYNE2-214ENST00000554928 SMIM17P0DL12 118 aa8.34□□□□□ -1.07
SYNE2-214ENST00000554928 RPL36AP83881 106 aaKnown RBP8.34□□□□□ -1.07
SYNE2-214ENST00000554928 CT83Q5H943 113 aa8.34□□□□□ -1.07
SYNE2-214ENST00000554928 SOHLH1Q5JUK2 328 aa8.34□□□□□ -1.07
SYNE2-214ENST00000554928 WDR73Q6P4I2 378 aa8.34□□□□□ -1.07
SYNE2-214ENST00000554928 TSKUQ8WUA8 353 aa8.34□□□□□ -1.07
SYNE2-214ENST00000554928 RPL36ALQ969Q0 106 aaKnown RBP8.34□□□□□ -1.07
SYNE2-214ENST00000554928 SMDT1Q9H4I9 107 aa8.34□□□□□ -1.07
SYNE2-214ENST00000554928 HERC2O95714 4834 aa8.34□□□□□ -1.07
SYNE2-214ENST00000554928 TRAV8-6A0A0B4J262 113 aa8.33□□□□□ -1.08
SYNE2-214ENST00000554928 TRAV26-2A0A0B4J265 109 aa8.33□□□□□ -1.08
SYNE2-214ENST00000554928 HIGD1CA8MV81 97 aa8.33□□□□□ -1.08
SYNE2-214ENST00000554928 TRGC1P0CF51 173 aa8.33□□□□□ -1.08
SYNE2-214ENST00000554928 RAB14P61106 215 aa8.33□□□□□ -1.08
SYNE2-214ENST00000554928 LINC01556Q5JQF7 62 aa8.33□□□□□ -1.08
SYNE2-214ENST00000554928 DEFB104AQ8WTQ1 72 aa8.33□□□□□ -1.08
SYNE2-214ENST00000554928 DPH3P1Q9H4G8 78 aa8.33□□□□□ -1.08
SYNE2-214ENST00000554928 GAS8-AS1O95177 125 aa8.32□□□□□ -1.08
SYNE2-214ENST00000554928 NTM-AS1Q6ZSK4 140 aa8.32□□□□□ -1.08
SYNE2-214ENST00000554928 DAZ4Q86SG3 579 aaKnown RBP8.31□□□□□ -1.08
SYNE2-214ENST00000554928 C15orf54Q8N8G6 183 aa8.31□□□□□ -1.08
SYNE2-214ENST00000554928 GATD1Q8NB37 220 aa8.31□□□□□ -1.08
SYNE2-214ENST00000554928 NUP35Q8NFH5 326 aa8.31□□□□□ -1.08
SYNE2-214ENST00000554928 DNAJC30Q96LL9 226 aa8.31□□□□□ -1.08
SYNE2-214ENST00000554928 DAZ3Q9NR90 486 aaKnown RBP8.31□□□□□ -1.08
SYNE2-214ENST00000554928 RYR1P21817 5038 aa8.3□□□□□ -1.08
SYNE2-214ENST00000554928 RASL11AQ6T310 242 aa8.3□□□□□ -1.08
SYNE2-214ENST00000554928 RPL39LQ96EH5 51 aaKnown RBP8.3□□□□□ -1.08
SYNE2-214ENST00000554928 GFRA4Q9GZZ7 299 aa8.3□□□□□ -1.08
SYNE2-214ENST00000554928 APOBP04114 4563 aaKnown RBP8.29□□□□□ -1.08
SYNE2-214ENST00000554928 TRAV9-2A0A087WT02 112 aa8.29□□□□□ -1.08
SYNE2-214ENST00000554928 A0A087WWC5 75 aa8.29□□□□□ -1.08
SYNE2-214ENST00000554928 TRBV6-8A0A0A6YYG3 113 aa8.29□□□□□ -1.08
SYNE2-214ENST00000554928 A0A1B0GUT8 65 aa8.29□□□□□ -1.08
SYNE2-214ENST00000554928 IBA57-AS1B1ANH7 110 aa8.29□□□□□ -1.08
SYNE2-214ENST00000554928 ADCYAP1P18509 176 aa8.29□□□□□ -1.08
SYNE2-214ENST00000554928 FUSP35637 526 aaKnown RBP eCLIP8.29□□□□□ -1.08
SYNE2-214ENST00000554928 NIT1Q86X76 327 aa8.29□□□□□ -1.08
SYNE2-214ENST00000554928 RNF185Q96GF1 192 aa8.29□□□□□ -1.08
SYNE2-214ENST00000554928 Q9HAA7 133 aa8.29□□□□□ -1.08
SYNE2-214ENST00000554928 SMIM27A0A1W2PRY6 76 aa8.28□□□□□ -1.08
SYNE2-214ENST00000554928 FAM231BA6NCW3 169 aa8.28□□□□□ -1.08
SYNE2-214ENST00000554928 BTF3P20290 206 aaKnown RBP8.27□□□□□ -1.09
SYNE2-214ENST00000554928 KRTAP10-2P60368 255 aa8.27□□□□□ -1.09
SYNE2-214ENST00000554928 AMN1Q8IY45 258 aa8.27□□□□□ -1.09
SYNE2-214ENST00000554928 C10orf126Q8N4M7 172 aa8.27□□□□□ -1.09
SYNE2-214ENST00000554928 NIT2Q9NQR4 276 aa8.27□□□□□ -1.09
SYNE2-214ENST00000554928 SMKR1H3BMG3 65 aa8.26□□□□□ -1.09
SYNE2-214ENST00000554928 H7C1H1 209 aa8.26□□□□□ -1.09
SYNE2-214ENST00000554928 RPS10P46783 165 aaKnown RBP8.26□□□□□ -1.09
SYNE2-214ENST00000554928 MPV17L2Q567V2 206 aa8.26□□□□□ -1.09
SYNE2-214ENST00000554928 BORCS7Q96B45 105 aa8.26□□□□□ -1.09
SYNE2-214ENST00000554928 TMEM191AQ9H0A3 160 aa8.26□□□□□ -1.09
SYNE2-214ENST00000554928 NAT8BQ9UHF3 227 aa8.26□□□□□ -1.09
SYNE2-214ENST00000554928 NCR2O95944 276 aa8.25□□□□□ -1.09
SYNE2-214ENST00000554928 RAB4AP20338 218 aa8.25□□□□□ -1.09
SYNE2-214ENST00000554928 GAGE6Q13070 117 aa8.25□□□□□ -1.09
SYNE2-214ENST00000554928 MRPL54Q6P161 138 aaKnown RBP8.25□□□□□ -1.09
SYNE2-214ENST00000554928 SMIM15Q7Z3B0 74 aa8.25□□□□□ -1.09
SYNE2-214ENST00000554928 COMMD7Q86VX2 200 aa8.25□□□□□ -1.09
SYNE2-214ENST00000554928 Q8N976 141 aa8.25□□□□□ -1.09
SYNE2-214ENST00000554928 KLK12Q9UKR0 248 aa8.25□□□□□ -1.09
SYNE2-214ENST00000554928 TMEM218A2RU14 115 aa8.24□□□□□ -1.09
SYNE2-214ENST00000554928 TMEM262E9PQX1 116 aa8.24□□□□□ -1.09
SYNE2-214ENST00000554928 K7EP13 123 aa8.24□□□□□ -1.09
SYNE2-214ENST00000554928 RIGQ13278 110 aa8.24□□□□□ -1.09
SYNE2-214ENST00000554928 WFDC2Q14508 124 aa8.24□□□□□ -1.09
SYNE2-214ENST00000554928 IQCJQ1A5X6 159 aa8.24□□□□□ -1.09
SYNE2-214ENST00000554928 ATRAIDQ6UW56 229 aa8.24□□□□□ -1.09
SYNE2-214ENST00000554928 SPATA12Q7Z6I5 190 aa8.24□□□□□ -1.09
SYNE2-214ENST00000554928 NFE4Q86UQ8 179 aa8.24□□□□□ -1.09
SYNE2-214ENST00000554928 CHCHD5Q9BSY4 110 aa8.24□□□□□ -1.09
SYNE2-214ENST00000554928 HSPG2P98160 4391 aa8.24□□□□□ -1.09
SYNE2-214ENST00000554928 A0A087WTM6 91 aa8.23□□□□□ -1.09
SYNE2-214ENST00000554928 CAMPP49913 170 aa8.23□□□□□ -1.09
SYNE2-214ENST00000554928 MAPKAPK5-AS1Q8N8E1 139 aa8.23□□□□□ -1.09
SYNE2-214ENST00000554928 TRBV25-1A0A075B6N4 114 aa8.22□□□□□ -1.09
SYNE2-214ENST00000554928 A0A087WX48 190 aa8.22□□□□□ -1.09
SYNE2-214ENST00000554928 IGHV1-24A0A0C4DH33 117 aa8.22□□□□□ -1.09
SYNE2-214ENST00000554928 A0A1B0GXF2 115 aa8.22□□□□□ -1.09
SYNE2-214ENST00000554928 LRCOL1A6NCL2 159 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms