RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 Q8N6K4 173 aa3.78□□□□□ -1.8
MTHFD1-206ENST00000554353 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.78□□□□□ -1.8
MTHFD1-206ENST00000554353 TMEM14CQ9P0S9 112 aa3.78□□□□□ -1.8
MTHFD1-206ENST00000554353 DPM3Q9P2X0 92 aa3.78□□□□□ -1.8
MTHFD1-206ENST00000554353 FAM236DA0A1B0GTK5 79 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 A0A1B0GXF2 115 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 WI2-2373I1.2A0A1W2PRP0 233 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 TMEM189A5PLL7 270 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 C19orf71A6NCJ1 209 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 RPL37AP8A6NKH3 93 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 ZNF705GA8MUZ8 300 aaPredicted RBP3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 H3BRN7 92 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 SPINK4O60575 86 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 NDUFC2O95298 119 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 LTAP01374 205 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 HLA-DQA1P01909 254 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 MT-ND6P03923 174 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 TCRAP04437 139 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 SLC25A5P05141 298 aaKnown RBP3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 FAM236CP0DP71 79 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 CRISP2P16562 243 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 RPS20P60866 119 aaKnown RBP3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 PRR3P79522 188 aaKnown RBP3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 C1orf194Q5T5A4 169 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 MRPL54Q6P161 138 aaKnown RBP3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 RASL11AQ6T310 242 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 TEX43Q6ZNM6 134 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 Q8N976 141 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 C5orf17Q8NAS9 161 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 NUP35Q8NFH5 326 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 CMTM2Q8TAZ6 248 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 ZNF414Q96IQ9 312 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 SHANK2-AS3Q9BTD1 123 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 Q9H3A6 140 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 EDA2RQ9HAV5 297 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 ZNF586Q9NXT0 402 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 ZNF492Q9P255 531 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 NAT8BQ9UHF3 227 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 HSPB8Q9UJY1 196 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 HIGD1AQ9Y241 93 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 HILPDAQ9Y5L2 63 aa3.77□□□□□ -1.81
MTHFD1-206ENST00000554353 NOTCH1P46531 2555 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 IGLV11-55A0A075B6I3 123 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 TRBV6-1A0A0K0K1D8 114 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 OOSP1A8MZH6 123 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 C8orf87E5RJ46 101 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 GPX1P07203 203 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 MSMBP08118 114 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 IGLL1P15814 213 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 CD24P25063 80 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 TPPP2P59282 170 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 LYZP61626 148 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 NDPQ00604 133 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 MMDQ15546 238 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 IQCJQ1A5X6 159 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 KLK9Q2XQG4 91 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 C9orf66Q5T8R8 295 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 VMO1Q7Z5L0 202 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 GTSCR1Q86UQ5 136 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 TTC9CQ8N5M4 171 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 DEFB125Q8N687 156 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 C3orf56Q8N813 242 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 ZNF418Q8TF45 676 aaPredicted RBP3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 TSKUQ8WUA8 353 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 GPR82Q96P67 336 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 OTORQ9NRC9 128 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 KLK9Q9UKQ9 250 aa3.76□□□□□ -1.81
MTHFD1-206ENST00000554353 TRBV19A0A075B6N1 114 aa3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 PLAC8L1A1L4L8 177 aa3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 J3KT08 172 aa3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 APCSP02743 223 aa3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 IGLC2P0DOY2 106 aa3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 SRIP30626 198 aa3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 BRS3P32247 399 aa3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 UBE2G1P62253 170 aa3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 RPS28P62857 69 aaKnown RBP3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 PLGLAQ15195 96 aa3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 MINOS1Q5TGZ0 78 aa3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 LCN12Q6JVE5 192 aa3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 Q86TA4 180 aa3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 BAGE3Q86Y29 109 aa3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 EXOC3-AS1Q8N2X6 119 aa3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 C11orf72Q8NBR9 251 aa3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 C18orf32Q8TCD1 76 aa3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 GTSF1Q8WW33 167 aa3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 FAM103A1Q9BTL3 118 aaKnown RBP3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 RPP21Q9H633 154 aaKnown RBP3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 ZNF331Q9NQX6 463 aaPredicted RBP3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 MINOS1-NBL1R4GNA1 71 aa3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 DNAH3Q8TD57 4116 aa3.75□□□□□ -1.81
MTHFD1-206ENST00000554353 TRAV30A0A087WSZ9 112 aa3.74□□□□□ -1.81
MTHFD1-206ENST00000554353 TRAV9-2A0A087WT02 112 aa3.74□□□□□ -1.81
MTHFD1-206ENST00000554353 TRAV8-1A0A0A6YYK1 113 aa3.74□□□□□ -1.81
MTHFD1-206ENST00000554353 IGHV7-81A0A0B4J1V7 117 aa3.74□□□□□ -1.81
MTHFD1-206ENST00000554353 IGHV3-16A0A0C4DH30 117 aa3.74□□□□□ -1.81
MTHFD1-206ENST00000554353 HIGD1CA8MV81 97 aa3.74□□□□□ -1.81
MTHFD1-206ENST00000554353 A8MWL6 223 aa3.74□□□□□ -1.81
MTHFD1-206ENST00000554353 PSPHP1O15172 72 aa3.74□□□□□ -1.81
MTHFD1-206ENST00000554353 ZNF324O75467 553 aaPredicted RBP3.74□□□□□ -1.81
MTHFD1-206ENST00000554353 HLA-DRB1P01911 266 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms