RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 RPL36ALQ969Q0 106 aaKnown RBP5.75□□□□□ -1.49
PSEN1-209ENST00000553855 BORCS7Q96B45 105 aa5.75□□□□□ -1.49
PSEN1-209ENST00000553855 LY96Q9Y6Y9 160 aa5.75□□□□□ -1.49
PSEN1-209ENST00000553855 LOC100131303A0A0U1RQF7 123 aa5.74□□□□□ -1.49
PSEN1-209ENST00000553855 C19orf71A6NCJ1 209 aa5.74□□□□□ -1.49
PSEN1-209ENST00000553855 KRTAP9-7A8MTY7 169 aa5.74□□□□□ -1.49
PSEN1-209ENST00000553855 USP17L23D6RBM5 183 aa5.74□□□□□ -1.49
PSEN1-209ENST00000553855 SNAI2O43623 268 aa5.74□□□□□ -1.49
PSEN1-209ENST00000553855 TRGC1P0CF51 173 aa5.74□□□□□ -1.49
PSEN1-209ENST00000553855 ERVFC1-1P60608 527 aa5.74□□□□□ -1.49
PSEN1-209ENST00000553855 NDUFA5Q16718 116 aa5.74□□□□□ -1.49
PSEN1-209ENST00000553855 KCNIP4Q6PIL6 250 aa5.74□□□□□ -1.49
PSEN1-209ENST00000553855 C6orf223Q8N319 242 aa5.74□□□□□ -1.49
PSEN1-209ENST00000553855 OCC1Q8TAD7 63 aa5.74□□□□□ -1.49
PSEN1-209ENST00000553855 RPP21Q9H633 154 aaKnown RBP5.74□□□□□ -1.49
PSEN1-209ENST00000553855 JPT2Q9H910 190 aa5.74□□□□□ -1.49
PSEN1-209ENST00000553855 TRBV20OR9-2A0A075B6H5 130 aa5.73□□□□□ -1.49
PSEN1-209ENST00000553855 A0A087WWC5 75 aa5.73□□□□□ -1.49
PSEN1-209ENST00000553855 A0A0A0MQY5 61 aa5.73□□□□□ -1.49
PSEN1-209ENST00000553855 MUC21A0A0G2JKD1 596 aa5.73□□□□□ -1.49
PSEN1-209ENST00000553855 TRBV10-1A0A0K0K1A3 114 aa5.73□□□□□ -1.49
PSEN1-209ENST00000553855 MUC21A0A140T8X8 626 aa5.73□□□□□ -1.49
PSEN1-209ENST00000553855 A8MWL6 223 aa5.73□□□□□ -1.49
PSEN1-209ENST00000553855 H7C1H1 209 aa5.73□□□□□ -1.49
PSEN1-209ENST00000553855 K7EP13 123 aa5.73□□□□□ -1.49
PSEN1-209ENST00000553855 IGLV2-8P01709 118 aa5.73□□□□□ -1.49
PSEN1-209ENST00000553855 RAB4BP61018 213 aa5.73□□□□□ -1.49
PSEN1-209ENST00000553855 FAM74A3Q4VXF1 159 aa5.73□□□□□ -1.49
PSEN1-209ENST00000553855 Q6ZR54 194 aa5.73□□□□□ -1.49
PSEN1-209ENST00000553855 C10orf126Q8N4M7 172 aa5.73□□□□□ -1.49
PSEN1-209ENST00000553855 C14orf178Q8N769 122 aaPredicted RBP5.73□□□□□ -1.49
PSEN1-209ENST00000553855 C15orf54Q8N8G6 183 aa5.73□□□□□ -1.49
PSEN1-209ENST00000553855 TM2D2Q9BX73 214 aa5.73□□□□□ -1.49
PSEN1-209ENST00000553855 SAMD10Q9BYL1 202 aa5.73□□□□□ -1.49
PSEN1-209ENST00000553855 RNASE7Q9H1E1 156 aaKnown RBP5.73□□□□□ -1.49
PSEN1-209ENST00000553855 GTSF1LQ9H1H1 148 aa5.73□□□□□ -1.49
PSEN1-209ENST00000553855 SMDT1Q9H4I9 107 aa5.73□□□□□ -1.49
PSEN1-209ENST00000553855 MUC4Q99102 2169 aa5.73□□□□□ -1.49
PSEN1-209ENST00000553855 IGHV3-38A0A0C4DH36 116 aa5.72□□□□□ -1.49
PSEN1-209ENST00000553855 CRYGDP07320 174 aa5.72□□□□□ -1.49
PSEN1-209ENST00000553855 MGPP08493 103 aa5.72□□□□□ -1.49
PSEN1-209ENST00000553855 SRP19P09132 144 aaKnown RBP5.72□□□□□ -1.49
PSEN1-209ENST00000553855 GZMBP10144 247 aa5.72□□□□□ -1.49
PSEN1-209ENST00000553855 TWIST1Q15672 202 aa5.72□□□□□ -1.49
PSEN1-209ENST00000553855 TMEM241Q24JQ0 296 aa5.72□□□□□ -1.49
PSEN1-209ENST00000553855 LELP1Q5T871 98 aa5.72□□□□□ -1.49
PSEN1-209ENST00000553855 FAM231DQ6ZW35 169 aa5.72□□□□□ -1.49
PSEN1-209ENST00000553855 NFE4Q86UQ8 179 aa5.72□□□□□ -1.49
PSEN1-209ENST00000553855 URGCP-MRPS24S4R325 110 aa5.72□□□□□ -1.49
PSEN1-209ENST00000553855 VPS13DQ5THJ4 4388 aa5.71□□□□□ -1.5
PSEN1-209ENST00000553855 IGLC6P0CF74 106 aa5.71□□□□□ -1.5
PSEN1-209ENST00000553855 UFSP1Q6NVU6 142 aa5.71□□□□□ -1.5
PSEN1-209ENST00000553855 WDR73Q6P4I2 378 aa5.71□□□□□ -1.5
PSEN1-209ENST00000553855 LYZL1Q6UWQ5 148 aa5.71□□□□□ -1.5
PSEN1-209ENST00000553855 TNFRSF18Q9Y5U5 241 aa5.71□□□□□ -1.5
PSEN1-209ENST00000553855 TRBV7-3A0A075B6L6 115 aa5.7□□□□□ -1.5
PSEN1-209ENST00000553855 K7EN84 100 aa5.7□□□□□ -1.5
PSEN1-209ENST00000553855 NTF3P20783 257 aa5.7□□□□□ -1.5
PSEN1-209ENST00000553855 ADIRFQ15847 76 aa5.7□□□□□ -1.5
PSEN1-209ENST00000553855 TMEM97Q5BJF2 176 aa5.7□□□□□ -1.5
PSEN1-209ENST00000553855 LINC01551Q86U37 167 aa5.7□□□□□ -1.5
PSEN1-209ENST00000553855 WFDC10BQ8IUB3 73 aa5.7□□□□□ -1.5
PSEN1-209ENST00000553855 DPH3P1Q9H4G8 78 aa5.7□□□□□ -1.5
PSEN1-209ENST00000553855 NAT8Q9UHE5 227 aa5.7□□□□□ -1.5
PSEN1-209ENST00000553855 RTL8CO15255 209 aa5.69□□□□□ -1.5
PSEN1-209ENST00000553855 DNAH10OSP0CZ25 163 aa5.69□□□□□ -1.5
PSEN1-209ENST00000553855 PKIAP61925 76 aa5.69□□□□□ -1.5
PSEN1-209ENST00000553855 ZNF575Q86XF7 245 aa5.69□□□□□ -1.5
PSEN1-209ENST00000553855 DNAJC30Q96LL9 226 aa5.69□□□□□ -1.5
PSEN1-209ENST00000553855 OSTCQ9NRP0 149 aa5.69□□□□□ -1.5
PSEN1-209ENST00000553855 MSRB1Q9NZV6 116 aa5.69□□□□□ -1.5
PSEN1-209ENST00000553855 A0A087WX48 190 aa5.68□□□□□ -1.5
PSEN1-209ENST00000553855 FAM231BA6NCW3 169 aa5.68□□□□□ -1.5
PSEN1-209ENST00000553855 TMEM262E9PQX1 116 aa5.68□□□□□ -1.5
PSEN1-209ENST00000553855 PSCAO43653 123 aa5.68□□□□□ -1.5
PSEN1-209ENST00000553855 IGHV3-30P01768 117 aa5.68□□□□□ -1.5
PSEN1-209ENST00000553855 IGHV3-33P01772 117 aa5.68□□□□□ -1.5
PSEN1-209ENST00000553855 IGHV3-30-3P0DP02 117 aa5.68□□□□□ -1.5
PSEN1-209ENST00000553855 IGHV3-30-5P0DP03 117 aa5.68□□□□□ -1.5
PSEN1-209ENST00000553855 CTRLP40313 264 aa5.68□□□□□ -1.5
PSEN1-209ENST00000553855 LINC00315P59091 139 aa5.68□□□□□ -1.5
PSEN1-209ENST00000553855 ELOBQ15370 118 aa5.68□□□□□ -1.5
PSEN1-209ENST00000553855 LINC01556Q5JQF7 62 aa5.68□□□□□ -1.5
PSEN1-209ENST00000553855 DAZ4Q86SG3 579 aaKnown RBP5.68□□□□□ -1.5
PSEN1-209ENST00000553855 OR10G8Q8NGN5 311 aa5.68□□□□□ -1.5
PSEN1-209ENST00000553855 TSKUQ8WUA8 353 aa5.68□□□□□ -1.5
PSEN1-209ENST00000553855 PGLYRP4Q96LB8 373 aa5.68□□□□□ -1.5
PSEN1-209ENST00000553855 GFRA4Q9GZZ7 299 aa5.68□□□□□ -1.5
PSEN1-209ENST00000553855 DAZ3Q9NR90 486 aaKnown RBP5.68□□□□□ -1.5
PSEN1-209ENST00000553855 NACAE9PAV3 2078 aa5.67□□□□□ -1.5
PSEN1-209ENST00000553855 A0A1B0GUT8 65 aa5.67□□□□□ -1.5
PSEN1-209ENST00000553855 ATP6V1G1O75348 118 aa5.67□□□□□ -1.5
PSEN1-209ENST00000553855 S100A1P23297 94 aa5.67□□□□□ -1.5
PSEN1-209ENST00000553855 CAMPP49913 170 aa5.67□□□□□ -1.5
PSEN1-209ENST00000553855 UBE2D3P61077 147 aa5.67□□□□□ -1.5
PSEN1-209ENST00000553855 RPL23P62829 140 aaKnown RBP5.67□□□□□ -1.5
PSEN1-209ENST00000553855 UBE2D2P62837 147 aa5.67□□□□□ -1.5
PSEN1-209ENST00000553855 IFITM2Q01629 132 aa5.67□□□□□ -1.5
PSEN1-209ENST00000553855 RIGQ13278 110 aa5.67□□□□□ -1.5
PSEN1-209ENST00000553855 SUMO4Q6EEV6 95 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms