RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 NFE4Q86UQ8 179 aa4.43□□□□□ -1.7
CHMP4A-210ENST00000552620 RPL36ALQ969Q0 106 aaKnown RBP4.43□□□□□ -1.7
CHMP4A-210ENST00000552620 C9orf85Q96MD7 179 aa4.43□□□□□ -1.7
CHMP4A-210ENST00000552620 TP53TG1Q9Y2A0 90 aa4.43□□□□□ -1.7
CHMP4A-210ENST00000552620 ATMQ13315 3056 aa4.42□□□□□ -1.7
CHMP4A-210ENST00000552620 IGLV4-69A0A075B6H9 119 aa4.42□□□□□ -1.7
CHMP4A-210ENST00000552620 IGHV1OR15-1A0A075B7D0 117 aa4.42□□□□□ -1.7
CHMP4A-210ENST00000552620 TRAV12-3A0A0B4J271 114 aa4.42□□□□□ -1.7
CHMP4A-210ENST00000552620 A0A0J9YX75 114 aa4.42□□□□□ -1.7
CHMP4A-210ENST00000552620 A0A0J9YY99 117 aa4.42□□□□□ -1.7
CHMP4A-210ENST00000552620 TEX48A0A1B0GUV7 120 aa4.42□□□□□ -1.7
CHMP4A-210ENST00000552620 SDHAF1A6NFY7 115 aa4.42□□□□□ -1.7
CHMP4A-210ENST00000552620 J3QLI3 93 aa4.42□□□□□ -1.7
CHMP4A-210ENST00000552620 K7EQG2 157 aa4.42□□□□□ -1.7
CHMP4A-210ENST00000552620 TSHBP01222 138 aa4.42□□□□□ -1.7
CHMP4A-210ENST00000552620 DEFB1P60022 68 aa4.42□□□□□ -1.7
CHMP4A-210ENST00000552620 WFDC2Q14508 124 aa4.42□□□□□ -1.7
CHMP4A-210ENST00000552620 NSUN5P1Q3KNT7 163 aa4.42□□□□□ -1.7
CHMP4A-210ENST00000552620 ZNF876PQ49A33 203 aa4.42□□□□□ -1.7
CHMP4A-210ENST00000552620 ATP6V0E2Q8NHE4 81 aa4.42□□□□□ -1.7
CHMP4A-210ENST00000552620 DLX4Q92988 240 aaPredicted RBP4.42□□□□□ -1.7
CHMP4A-210ENST00000552620 SIGMAR1Q99720 223 aa4.42□□□□□ -1.7
CHMP4A-210ENST00000552620 VCX2Q9H322 139 aa4.42□□□□□ -1.7
CHMP4A-210ENST00000552620 EDA2RQ9HAV5 297 aa4.42□□□□□ -1.7
CHMP4A-210ENST00000552620 ZNF256Q9Y2P7 627 aaPredicted RBP4.42□□□□□ -1.7
CHMP4A-210ENST00000552620 TLN1Q9Y490 2541 aaKnown RBP4.42□□□□□ -1.7
CHMP4A-210ENST00000552620 IGKV3-7A0A075B6H7 116 aa4.41□□□□□ -1.7
CHMP4A-210ENST00000552620 TRBV20-1A0A075B6N2 111 aa4.41□□□□□ -1.7
CHMP4A-210ENST00000552620 IGHV4-30-2A0A087WSY4 118 aa4.41□□□□□ -1.7
CHMP4A-210ENST00000552620 M0QY20 66 aa4.41□□□□□ -1.7
CHMP4A-210ENST00000552620 CRYBA4P53673 196 aa4.41□□□□□ -1.7
CHMP4A-210ENST00000552620 MORN3Q6PF18 240 aaPredicted RBP4.41□□□□□ -1.7
CHMP4A-210ENST00000552620 SLC25A29Q8N8R3 303 aa4.41□□□□□ -1.7
CHMP4A-210ENST00000552620 PTH2Q96A98 100 aa4.41□□□□□ -1.7
CHMP4A-210ENST00000552620 MDFICQ9P1T7 246 aa4.41□□□□□ -1.7
CHMP4A-210ENST00000552620 PRO0461Q9UI25 63 aa4.41□□□□□ -1.7
CHMP4A-210ENST00000552620 MED13LQ71F56 2210 aa4.41□□□□□ -1.7
CHMP4A-210ENST00000552620 TRAV2A0A0B4J234 112 aa4.4□□□□□ -1.71
CHMP4A-210ENST00000552620 H3BMG7 143 aa4.4□□□□□ -1.71
CHMP4A-210ENST00000552620 I3L3M4 83 aa4.4□□□□□ -1.71
CHMP4A-210ENST00000552620 J3QQQ9 107 aa4.4□□□□□ -1.71
CHMP4A-210ENST00000552620 LEPROTO15243 131 aa4.4□□□□□ -1.71
CHMP4A-210ENST00000552620 LGALS3P17931 250 aaKnown RBP4.4□□□□□ -1.71
CHMP4A-210ENST00000552620 HOXD3P31249 432 aaPredicted RBP4.4□□□□□ -1.71
CHMP4A-210ENST00000552620 SEC61BP60468 96 aaKnown RBP4.4□□□□□ -1.71
CHMP4A-210ENST00000552620 UBE2D3P61077 147 aa4.4□□□□□ -1.71
CHMP4A-210ENST00000552620 UBE2D2P62837 147 aa4.4□□□□□ -1.71
CHMP4A-210ENST00000552620 PLEKHB2Q96CS7 222 aa4.4□□□□□ -1.71
CHMP4A-210ENST00000552620 MRPL16Q9NX20 251 aaKnown RBP4.4□□□□□ -1.71
CHMP4A-210ENST00000552620 AGRNO00468 2067 aa4.4□□□□□ -1.71
CHMP4A-210ENST00000552620 SMG1Q96Q15 3661 aaKnown RBP4.4□□□□□ -1.71
CHMP4A-210ENST00000552620 MUC6Q6W4X9 2439 aa4.4□□□□□ -1.71
CHMP4A-210ENST00000552620 MUC4Q99102 2169 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 TMEM223A0PJW6 202 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 A8MTW9 85 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 TMEM238C9JI98 176 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 GAGE7O76087 117 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 IGHV3-30P01768 117 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 ZNF688P0C7X2 276 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 GAGE12FP0CL80 117 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 GAGE12GP0CL81 117 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 GAGE12IP0CL82 117 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 IGHV3-30-5P0DP03 117 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 GAGE4Q13068 117 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 ZNF56Q15929 161 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 DEFB112Q30KQ8 113 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 ODF3L2Q3SX64 289 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 ETDBQ3ZM63 59 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 TMEM170BQ5T4T1 132 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 NDUFA11Q86Y39 141 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 C20orf203Q8NBC4 194 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 KLHL30-AS1Q8NEE0 82 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 ZNRF2Q8NHG8 242 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 UBE2E2Q96LR5 201 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 SPAG8Q99932 426 aaPredicted RBP4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 JPT2Q9H910 190 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 PYGO1Q9Y3Y4 419 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 LRBAP50851 2863 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 TACC2O95359 2948 aa4.39□□□□□ -1.71
CHMP4A-210ENST00000552620 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 M0QXV9 152 aa4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 TSPAN13O95857 204 aa4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 IGHV4-59P01825 116 aa4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 CFC1BP0CG36 223 aa4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 CFC1P0CG37 223 aa4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 P0DMU3 169 aa4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 FAM231AP0DMU4 169 aa4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 FAM231CP0DMU5 169 aa4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 PSMB2P49721 201 aa4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 RPL39P62891 51 aaKnown RBP4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 FAM74A4Q5TZK3 123 aa4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 CFAP126Q5VTH2 177 aa4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 AMTNQ6UX39 209 aa4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 SBSPONQ8IVN8 264 aa4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 C10orf126Q8N4M7 172 aa4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 AMELXQ99217 191 aa4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 LINC00467Q9BRT7 94 aa4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 KRTAP17-1Q9BYP8 105 aa4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 PRO1854Q9UHT4 67 aa4.38□□□□□ -1.71
CHMP4A-210ENST00000552620 TSSC4Q9Y5U2 329 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms