RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 KIF25-AS1Q9Y6Z4 181 aa6.32□□□□□ -1.4
CCDC59-207ENST00000552606 A0A1B0GXF2 115 aa6.31□□□□□ -1.4
CCDC59-207ENST00000552606 ATP6V1G1O75348 118 aa6.31□□□□□ -1.4
CCDC59-207ENST00000552606 LY6G6CO95867 125 aa6.31□□□□□ -1.4
CCDC59-207ENST00000552606 MT-ND6P03923 174 aa6.31□□□□□ -1.4
CCDC59-207ENST00000552606 SMIM17P0DL12 118 aa6.31□□□□□ -1.4
CCDC59-207ENST00000552606 P0DMU3 169 aa6.31□□□□□ -1.4
CCDC59-207ENST00000552606 FAM231AP0DMU4 169 aa6.31□□□□□ -1.4
CCDC59-207ENST00000552606 FAM231CP0DMU5 169 aa6.31□□□□□ -1.4
CCDC59-207ENST00000552606 LINC00315P59091 139 aa6.31□□□□□ -1.4
CCDC59-207ENST00000552606 RHOHQ15669 191 aa6.31□□□□□ -1.4
CCDC59-207ENST00000552606 FAM74A4Q5TZK3 123 aa6.31□□□□□ -1.4
CCDC59-207ENST00000552606 C14orf178Q8N769 122 aaPredicted RBP6.31□□□□□ -1.4
CCDC59-207ENST00000552606 TMEM191AQ9H0A3 160 aa6.31□□□□□ -1.4
CCDC59-207ENST00000552606 DPH3P1Q9H4G8 78 aa6.31□□□□□ -1.4
CCDC59-207ENST00000552606 TRBV24-1A0A075B6N3 115 aa6.3□□□□□ -1.4
CCDC59-207ENST00000552606 H7C1H1 209 aa6.3□□□□□ -1.4
CCDC59-207ENST00000552606 GYPEP15421 78 aa6.3□□□□□ -1.4
CCDC59-207ENST00000552606 NTF3P20783 257 aa6.3□□□□□ -1.4
CCDC59-207ENST00000552606 PGLYRP4Q96LB8 373 aa6.3□□□□□ -1.4
CCDC59-207ENST00000552606 SMCO4Q9NRQ5 59 aa6.3□□□□□ -1.4
CCDC59-207ENST00000552606 Q9UF83 564 aa6.3□□□□□ -1.4
CCDC59-207ENST00000552606 LINC00588Q9Y4M8 146 aa6.3□□□□□ -1.4
CCDC59-207ENST00000552606 TRBV10-1A0A0K0K1A3 114 aa6.29□□□□□ -1.4
CCDC59-207ENST00000552606 RAB4BP61018 213 aa6.29□□□□□ -1.4
CCDC59-207ENST00000552606 TWIST1Q15672 202 aa6.29□□□□□ -1.4
CCDC59-207ENST00000552606 MRPL23Q16540 153 aaKnown RBP6.29□□□□□ -1.4
CCDC59-207ENST00000552606 ESRGQ1W209 222 aa6.29□□□□□ -1.4
CCDC59-207ENST00000552606 KRTAP4-2Q9BYR5 136 aa6.29□□□□□ -1.4
CCDC59-207ENST00000552606 MRPS16Q9Y3D3 137 aaKnown RBP6.29□□□□□ -1.4
CCDC59-207ENST00000552606 PPP1R17O96001 155 aa6.28□□□□□ -1.4
CCDC59-207ENST00000552606 HLA-DQA1P01909 254 aa6.28□□□□□ -1.4
CCDC59-207ENST00000552606 EVI2AP22794 236 aa6.28□□□□□ -1.4
CCDC59-207ENST00000552606 SRIP30626 198 aa6.28□□□□□ -1.4
CCDC59-207ENST00000552606 FAM3BP58499 235 aaPredicted RBP6.28□□□□□ -1.4
CCDC59-207ENST00000552606 SSTP61278 116 aa6.28□□□□□ -1.4
CCDC59-207ENST00000552606 ZNF56Q15929 161 aa6.28□□□□□ -1.4
CCDC59-207ENST00000552606 NEGR1Q7Z3B1 354 aa6.28□□□□□ -1.4
CCDC59-207ENST00000552606 SH2D6Q7Z4S9 175 aa6.28□□□□□ -1.4
CCDC59-207ENST00000552606 ZNRF2Q8NHG8 242 aa6.28□□□□□ -1.4
CCDC59-207ENST00000552606 MRAP2Q96G30 205 aa6.28□□□□□ -1.4
CCDC59-207ENST00000552606 PRADC1Q9BSG0 188 aa6.28□□□□□ -1.4
CCDC59-207ENST00000552606 UPK3BQ9BT76 320 aa6.28□□□□□ -1.4
CCDC59-207ENST00000552606 PPBPP02775 128 aa6.27□□□□□ -1.41
CCDC59-207ENST00000552606 CCL18P55774 89 aa6.27□□□□□ -1.41
CCDC59-207ENST00000552606 TIRAPP58753 221 aa6.27□□□□□ -1.41
CCDC59-207ENST00000552606 ELOBQ15370 118 aa6.27□□□□□ -1.41
CCDC59-207ENST00000552606 UBE2DNLQ8IWF7 75 aa6.27□□□□□ -1.41
CCDC59-207ENST00000552606 GNB1LQ9BYB4 327 aa6.27□□□□□ -1.41
CCDC59-207ENST00000552606 LAMTOR2Q9Y2Q5 125 aa6.27□□□□□ -1.41
CCDC59-207ENST00000552606 PHOX2AO14813 284 aa6.26□□□□□ -1.41
CCDC59-207ENST00000552606 FAM104BQ5XKR9 115 aa6.26□□□□□ -1.41
CCDC59-207ENST00000552606 SUMO4Q6EEV6 95 aa6.26□□□□□ -1.41
CCDC59-207ENST00000552606 MRPL54Q6P161 138 aaKnown RBP6.26□□□□□ -1.41
CCDC59-207ENST00000552606 LYPD5Q6UWN5 251 aa6.26□□□□□ -1.41
CCDC59-207ENST00000552606 NEXN-AS1Q8NBZ9 246 aa6.26□□□□□ -1.41
CCDC59-207ENST00000552606 YPEL4Q96NS1 127 aa6.26□□□□□ -1.41
CCDC59-207ENST00000552606 FRAS1Q86XX4 4008 aa6.25□□□□□ -1.41
CCDC59-207ENST00000552606 GAGE12JA6NER3 117 aa6.25□□□□□ -1.41
CCDC59-207ENST00000552606 M0QY20 66 aa6.25□□□□□ -1.41
CCDC59-207ENST00000552606 MGPP08493 103 aa6.25□□□□□ -1.41
CCDC59-207ENST00000552606 UBE2D3P61077 147 aa6.25□□□□□ -1.41
CCDC59-207ENST00000552606 UBE2D2P62837 147 aa6.25□□□□□ -1.41
CCDC59-207ENST00000552606 GAGE1Q13065 139 aa6.25□□□□□ -1.41
CCDC59-207ENST00000552606 GAGE4Q13068 117 aa6.25□□□□□ -1.41
CCDC59-207ENST00000552606 GAGE5Q13069 117 aa6.25□□□□□ -1.41
CCDC59-207ENST00000552606 GAGE13Q4V321 117 aa6.25□□□□□ -1.41
CCDC59-207ENST00000552606 ATRAIDQ6UW56 229 aa6.25□□□□□ -1.41
CCDC59-207ENST00000552606 Q6ZR54 194 aa6.25□□□□□ -1.41
CCDC59-207ENST00000552606 DNAJC30Q96LL9 226 aa6.25□□□□□ -1.41
CCDC59-207ENST00000552606 URGCP-MRPS24S4R325 110 aa6.25□□□□□ -1.41
CCDC59-207ENST00000552606 DNAH2Q9P225 4427 aa6.24□□□□□ -1.41
CCDC59-207ENST00000552606 TRBV7-3A0A075B6L6 115 aa6.24□□□□□ -1.41
CCDC59-207ENST00000552606 TRBV6-5A0A0K0K1A5 114 aa6.24□□□□□ -1.41
CCDC59-207ENST00000552606 CAMPP49913 170 aa6.24□□□□□ -1.41
CCDC59-207ENST00000552606 RPL32P62910 135 aaKnown RBP6.24□□□□□ -1.41
CCDC59-207ENST00000552606 RPL36AP83881 106 aaKnown RBP6.24□□□□□ -1.41
CCDC59-207ENST00000552606 CBLN2Q8IUK8 224 aa6.24□□□□□ -1.41
CCDC59-207ENST00000552606 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.24□□□□□ -1.41
CCDC59-207ENST00000552606 ATP6V0E2Q8NHE4 81 aa6.24□□□□□ -1.41
CCDC59-207ENST00000552606 RPL36ALQ969Q0 106 aaKnown RBP6.24□□□□□ -1.41
CCDC59-207ENST00000552606 RNF185Q96GF1 192 aa6.24□□□□□ -1.41
CCDC59-207ENST00000552606 KRTAP1-5Q9BYS1 174 aa6.24□□□□□ -1.41
CCDC59-207ENST00000552606 IGLV2-18A0A075B6J9 118 aa6.23□□□□□ -1.41
CCDC59-207ENST00000552606 F5H697 171 aa6.23□□□□□ -1.41
CCDC59-207ENST00000552606 TCAPO15273 167 aa6.23□□□□□ -1.41
CCDC59-207ENST00000552606 RAB4AP20338 218 aa6.23□□□□□ -1.41
CCDC59-207ENST00000552606 TMEM97Q5BJF2 176 aa6.23□□□□□ -1.41
CCDC59-207ENST00000552606 LELP1Q5T871 98 aa6.23□□□□□ -1.41
CCDC59-207ENST00000552606 TMEM136Q6ZRR5 245 aa6.23□□□□□ -1.41
CCDC59-207ENST00000552606 WFDC10BQ8IUB3 73 aa6.23□□□□□ -1.41
CCDC59-207ENST00000552606 AMN1Q8IY45 258 aa6.23□□□□□ -1.41
CCDC59-207ENST00000552606 ORMDL3Q8N138 153 aa6.23□□□□□ -1.41
CCDC59-207ENST00000552606 GTSF1LQ9H1H1 148 aa6.23□□□□□ -1.41
CCDC59-207ENST00000552606 TRAV26-2A0A0B4J265 109 aa6.22□□□□□ -1.41
CCDC59-207ENST00000552606 MRPL51Q4U2R6 128 aaKnown RBP6.22□□□□□ -1.41
CCDC59-207ENST00000552606 DAZ4Q86SG3 579 aaKnown RBP6.22□□□□□ -1.41
CCDC59-207ENST00000552606 C20orf78Q9BR46 151 aa6.22□□□□□ -1.41
CCDC59-207ENST00000552606 Q9H8V8 135 aa6.22□□□□□ -1.41
CCDC59-207ENST00000552606 NIT2Q9NQR4 276 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms