RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 TRAV9-2A0A087WT02 112 aa4.6□□□□□ -1.67
CBX5-204ENST00000550411 RAB19A4D1S5 217 aa4.6□□□□□ -1.67
CBX5-204ENST00000550411 C19orf71A6NCJ1 209 aa4.6□□□□□ -1.67
CBX5-204ENST00000550411 GAGE12JA6NER3 117 aa4.6□□□□□ -1.67
CBX5-204ENST00000550411 M0R381 172 aa4.6□□□□□ -1.67
CBX5-204ENST00000550411 CIDEAO60543 219 aa4.6□□□□□ -1.67
CBX5-204ENST00000550411 S100A9P06702 114 aaKnown RBP4.6□□□□□ -1.67
CBX5-204ENST00000550411 NKX2-5P52952 324 aaPredicted RBP4.6□□□□□ -1.67
CBX5-204ENST00000550411 KRTAP10-1P60331 282 aa4.6□□□□□ -1.67
CBX5-204ENST00000550411 BLOC1S1P78537 153 aa4.6□□□□□ -1.67
CBX5-204ENST00000550411 MEF2BQ02080 365 aaPredicted RBP4.6□□□□□ -1.67
CBX5-204ENST00000550411 GAGE1Q13065 139 aa4.6□□□□□ -1.67
CBX5-204ENST00000550411 GAGE4Q13068 117 aa4.6□□□□□ -1.67
CBX5-204ENST00000550411 GAGE5Q13069 117 aa4.6□□□□□ -1.67
CBX5-204ENST00000550411 LINC01556Q5JQF7 62 aa4.6□□□□□ -1.67
CBX5-204ENST00000550411 PRR27Q6MZM9 219 aa4.6□□□□□ -1.67
CBX5-204ENST00000550411 LY96Q9Y6Y9 160 aa4.6□□□□□ -1.67
CBX5-204ENST00000550411 MUC21A0A0G2JKD1 596 aa4.59□□□□□ -1.67
CBX5-204ENST00000550411 MUC21A0A140T8X8 626 aa4.59□□□□□ -1.67
CBX5-204ENST00000550411 K7EP13 123 aa4.59□□□□□ -1.67
CBX5-204ENST00000550411 RHODO00212 210 aa4.59□□□□□ -1.67
CBX5-204ENST00000550411 OR5AL1P0C617 328 aa4.59□□□□□ -1.67
CBX5-204ENST00000550411 IGLC6P0CF74 106 aa4.59□□□□□ -1.67
CBX5-204ENST00000550411 GZMBP10144 247 aa4.59□□□□□ -1.67
CBX5-204ENST00000550411 LELP1Q5T871 98 aa4.59□□□□□ -1.67
CBX5-204ENST00000550411 FAM74A4Q5TZK3 123 aa4.59□□□□□ -1.67
CBX5-204ENST00000550411 EIF5AL1Q6IS14 154 aaKnown RBP4.59□□□□□ -1.67
CBX5-204ENST00000550411 ALKAL2Q6UX46 152 aa4.59□□□□□ -1.67
CBX5-204ENST00000550411 SH2D6Q7Z4S9 175 aa4.59□□□□□ -1.67
CBX5-204ENST00000550411 KRTAP19-1Q8IUB9 90 aa4.59□□□□□ -1.67
CBX5-204ENST00000550411 ZFP82Q8N141 532 aa4.59□□□□□ -1.67
CBX5-204ENST00000550411 ATP6V0E2Q8NHE4 81 aa4.59□□□□□ -1.67
CBX5-204ENST00000550411 PRADC1Q9BSG0 188 aa4.59□□□□□ -1.67
CBX5-204ENST00000550411 TM2D2Q9BX73 214 aa4.59□□□□□ -1.67
CBX5-204ENST00000550411 GTSF1LQ9H1H1 148 aa4.59□□□□□ -1.67
CBX5-204ENST00000550411 MSRB1Q9NZV6 116 aa4.59□□□□□ -1.67
CBX5-204ENST00000550411 PHLDA3Q9Y5J5 127 aa4.59□□□□□ -1.67
CBX5-204ENST00000550411 KIF25-AS1Q9Y6Z4 181 aa4.59□□□□□ -1.67
CBX5-204ENST00000550411 IGHV3-38A0A0C4DH36 116 aa4.58□□□□□ -1.68
CBX5-204ENST00000550411 RBFOX3A6NFN3 312 aa4.58□□□□□ -1.68
CBX5-204ENST00000550411 K7EN84 100 aa4.58□□□□□ -1.68
CBX5-204ENST00000550411 EVI2AP22794 236 aa4.58□□□□□ -1.68
CBX5-204ENST00000550411 LYPD6BQ8NI32 183 aa4.58□□□□□ -1.68
CBX5-204ENST00000550411 LRCOL1A6NCL2 159 aa4.57□□□□□ -1.68
CBX5-204ENST00000550411 IBA57-AS1B1ANH7 110 aa4.57□□□□□ -1.68
CBX5-204ENST00000550411 PDE6DO43924 150 aa4.57□□□□□ -1.68
CBX5-204ENST00000550411 IGHV3-30P01768 117 aa4.57□□□□□ -1.68
CBX5-204ENST00000550411 IGHV3-33P01772 117 aa4.57□□□□□ -1.68
CBX5-204ENST00000550411 IGHV3-30-3P0DP02 117 aa4.57□□□□□ -1.68
CBX5-204ENST00000550411 IGHV3-30-5P0DP03 117 aa4.57□□□□□ -1.68
CBX5-204ENST00000550411 GNG4P50150 75 aa4.57□□□□□ -1.68
CBX5-204ENST00000550411 UBE2D3P61077 147 aa4.57□□□□□ -1.68
CBX5-204ENST00000550411 UBE2D2P62837 147 aa4.57□□□□□ -1.68
CBX5-204ENST00000550411 WFDC2Q14508 124 aa4.57□□□□□ -1.68
CBX5-204ENST00000550411 OR10J3Q5JRS4 329 aa4.57□□□□□ -1.68
CBX5-204ENST00000550411 PET117Q6UWS5 81 aa4.57□□□□□ -1.68
CBX5-204ENST00000550411 NEXN-AS1Q8NBZ9 246 aa4.57□□□□□ -1.68
CBX5-204ENST00000550411 OR10G8Q8NGN5 311 aa4.57□□□□□ -1.68
CBX5-204ENST00000550411 DNAJC30Q96LL9 226 aa4.57□□□□□ -1.68
CBX5-204ENST00000550411 KRTAP4-7Q9BYR0 210 aa4.57□□□□□ -1.68
CBX5-204ENST00000550411 KRTAP3-1Q9BYR8 98 aa4.57□□□□□ -1.68
CBX5-204ENST00000550411 VAX2Q9UIW0 290 aa4.57□□□□□ -1.68
CBX5-204ENST00000550411 IGLV5-52A0A0A0MRZ9 124 aa4.56□□□□□ -1.68
CBX5-204ENST00000550411 TRAV8-6A0A0B4J262 113 aa4.56□□□□□ -1.68
CBX5-204ENST00000550411 TRBV10-1A0A0K0K1A3 114 aa4.56□□□□□ -1.68
CBX5-204ENST00000550411 PSCAO43653 123 aa4.56□□□□□ -1.68
CBX5-204ENST00000550411 IFNA1P01562 189 aa4.56□□□□□ -1.68
CBX5-204ENST00000550411 CTRLP40313 264 aa4.56□□□□□ -1.68
CBX5-204ENST00000550411 HAMPP81172 84 aa4.56□□□□□ -1.68
CBX5-204ENST00000550411 FOXI1Q12951 378 aa4.56□□□□□ -1.68
CBX5-204ENST00000550411 DAZ4Q86SG3 579 aaKnown RBP4.56□□□□□ -1.68
CBX5-204ENST00000550411 C10orf126Q8N4M7 172 aa4.56□□□□□ -1.68
CBX5-204ENST00000550411 FER1L6-AS1Q8NA97 138 aa4.56□□□□□ -1.68
CBX5-204ENST00000550411 OR2D3Q8NGH3 330 aa4.56□□□□□ -1.68
CBX5-204ENST00000550411 NTN5Q8WTR8 489 aaPredicted RBP4.56□□□□□ -1.68
CBX5-204ENST00000550411 SMIM12Q96EX1 92 aa4.56□□□□□ -1.68
CBX5-204ENST00000550411 TMEM70Q9BUB7 260 aa4.56□□□□□ -1.68
CBX5-204ENST00000550411 Q9HAA7 133 aa4.56□□□□□ -1.68
CBX5-204ENST00000550411 DAZ3Q9NR90 486 aaKnown RBP4.56□□□□□ -1.68
CBX5-204ENST00000550411 MED9Q9NWA0 146 aa4.56□□□□□ -1.68
CBX5-204ENST00000550411 PKHD1L1Q86WI1 4243 aa4.56□□□□□ -1.68
CBX5-204ENST00000550411 A4D1N5 150 aa4.55□□□□□ -1.68
CBX5-204ENST00000550411 TEX46H3BTG2 121 aa4.55□□□□□ -1.68
CBX5-204ENST00000550411 RAB4BP61018 213 aa4.55□□□□□ -1.68
CBX5-204ENST00000550411 IFITM2Q01629 132 aa4.55□□□□□ -1.68
CBX5-204ENST00000550411 LAGE3Q14657 143 aa4.55□□□□□ -1.68
CBX5-204ENST00000550411 ZNF56Q15929 161 aa4.55□□□□□ -1.68
CBX5-204ENST00000550411 NIT1Q86X76 327 aa4.55□□□□□ -1.68
CBX5-204ENST00000550411 AP1S3Q96PC3 154 aa4.55□□□□□ -1.68
CBX5-204ENST00000550411 RNASE7Q9H1E1 156 aaKnown RBP4.55□□□□□ -1.68
CBX5-204ENST00000550411 TRBV7-3A0A075B6L6 115 aa4.54□□□□□ -1.68
CBX5-204ENST00000550411 A0A087WWC5 75 aa4.54□□□□□ -1.68
CBX5-204ENST00000550411 TMEM250H0YL14 139 aa4.54□□□□□ -1.68
CBX5-204ENST00000550411 ATP6V1G1O75348 118 aa4.54□□□□□ -1.68
CBX5-204ENST00000550411 P01737 135 aa4.54□□□□□ -1.68
CBX5-204ENST00000550411 TAGLN2P37802 199 aaKnown RBP4.54□□□□□ -1.68
CBX5-204ENST00000550411 SSTP61278 116 aa4.54□□□□□ -1.68
CBX5-204ENST00000550411 NDUFA5Q16718 116 aa4.54□□□□□ -1.68
CBX5-204ENST00000550411 SPANXN1Q5VSR9 72 aa4.54□□□□□ -1.68
CBX5-204ENST00000550411 SUMO4Q6EEV6 95 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms