RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 URGCP-MRPS24S4R325 110 aa10.42□□□□□ -0.74
COX6A1-203ENST00000550009 TRAV1-1A0A0B4J248 108 aa10.41□□□□□ -0.74
COX6A1-203ENST00000550009 C19orf71A6NCJ1 209 aa10.41□□□□□ -0.74
COX6A1-203ENST00000550009 TMEM262E9PQX1 116 aa10.41□□□□□ -0.74
COX6A1-203ENST00000550009 SULT1A2P50226 295 aa10.41□□□□□ -0.74
COX6A1-203ENST00000550009 CLPSL2Q6UWE3 100 aa10.41□□□□□ -0.74
COX6A1-203ENST00000550009 MANBALQ9NQG1 85 aa10.41□□□□□ -0.74
COX6A1-203ENST00000550009 BOLA1Q9Y3E2 137 aa10.41□□□□□ -0.74
COX6A1-203ENST00000550009 A0A087WX48 190 aa10.4□□□□□ -0.74
COX6A1-203ENST00000550009 IGLC6P0CF74 106 aa10.4□□□□□ -0.74
COX6A1-203ENST00000550009 MGPP08493 103 aa10.39□□□□□ -0.75
COX6A1-203ENST00000550009 TOR2AQ5JU69 321 aa10.39□□□□□ -0.75
COX6A1-203ENST00000550009 ATRAIDQ6UW56 229 aa10.39□□□□□ -0.75
COX6A1-203ENST00000550009 OR2D3Q8NGH3 330 aa10.39□□□□□ -0.75
COX6A1-203ENST00000550009 DMBT1Q9UGM3 2413 aaPredicted RBP10.39□□□□□ -0.75
COX6A1-203ENST00000550009 EIF5AP63241 154 aaKnown RBP10.38□□□□□ -0.75
COX6A1-203ENST00000550009 GAGE6Q13070 117 aa10.38□□□□□ -0.75
COX6A1-203ENST00000550009 FER1L6-AS1Q8NA97 138 aa10.38□□□□□ -0.75
COX6A1-203ENST00000550009 CHCHD5Q9BSY4 110 aa10.38□□□□□ -0.75
COX6A1-203ENST00000550009 FAM229AH3BQW9 127 aa10.37□□□□□ -0.75
COX6A1-203ENST00000550009 M0QY20 66 aa10.37□□□□□ -0.75
COX6A1-203ENST00000550009 ANGP03950 147 aaKnown RBP10.37□□□□□ -0.75
COX6A1-203ENST00000550009 MEF2BQ02080 365 aaPredicted RBP10.37□□□□□ -0.75
COX6A1-203ENST00000550009 SUMO4Q6EEV6 95 aa10.37□□□□□ -0.75
COX6A1-203ENST00000550009 SCXQ7RTU7 201 aa10.37□□□□□ -0.75
COX6A1-203ENST00000550009 TCTE3Q8IZS6 198 aa10.37□□□□□ -0.75
COX6A1-203ENST00000550009 K7EN84 100 aa10.36□□□□□ -0.75
COX6A1-203ENST00000550009 GNG4P50150 75 aa10.36□□□□□ -0.75
COX6A1-203ENST00000550009 KRTAP26-1Q6PEX3 210 aa10.36□□□□□ -0.75
COX6A1-203ENST00000550009 LYZL1Q6UWQ5 148 aa10.36□□□□□ -0.75
COX6A1-203ENST00000550009 LINC00528Q8N1L1 170 aa10.36□□□□□ -0.75
COX6A1-203ENST00000550009 AP1S3Q96PC3 154 aa10.36□□□□□ -0.75
COX6A1-203ENST00000550009 MED9Q9NWA0 146 aa10.36□□□□□ -0.75
COX6A1-203ENST00000550009 VAX2Q9UIW0 290 aa10.36□□□□□ -0.75
COX6A1-203ENST00000550009 hCG_2014768A0A024R1R8 64 aa10.35□□□□□ -0.75
COX6A1-203ENST00000550009 BCL2P10415 239 aa10.35□□□□□ -0.75
COX6A1-203ENST00000550009 RBX1P62877 108 aa10.35□□□□□ -0.75
COX6A1-203ENST00000550009 RMI2Q96E14 147 aa10.35□□□□□ -0.75
COX6A1-203ENST00000550009 CHCHD7Q9BUK0 85 aa10.35□□□□□ -0.75
COX6A1-203ENST00000550009 GFRA4Q9GZZ7 299 aa10.35□□□□□ -0.75
COX6A1-203ENST00000550009 HLA-DQA1P01909 254 aa10.34□□□□□ -0.75
COX6A1-203ENST00000550009 SMIM17P0DL12 118 aa10.34□□□□□ -0.75
COX6A1-203ENST00000550009 RAB5CP51148 216 aa10.34□□□□□ -0.75
COX6A1-203ENST00000550009 NKX2-5P52952 324 aaPredicted RBP10.34□□□□□ -0.75
COX6A1-203ENST00000550009 Q6ZNX1 250 aa10.34□□□□□ -0.75
COX6A1-203ENST00000550009 LINC00269Q8N2A0 174 aa10.34□□□□□ -0.75
COX6A1-203ENST00000550009 NUDT10Q8NFP7 164 aa10.34□□□□□ -0.75
COX6A1-203ENST00000550009 DAZAP1Q96EP5 407 aaKnown RBP10.34□□□□□ -0.75
COX6A1-203ENST00000550009 NUDT11Q96G61 164 aa10.34□□□□□ -0.75
COX6A1-203ENST00000550009 RNASE7Q9H1E1 156 aaKnown RBP10.34□□□□□ -0.75
COX6A1-203ENST00000550009 USP17L23D6RBM5 183 aa10.33□□□□□ -0.76
COX6A1-203ENST00000550009 FOXA3P55318 350 aaPredicted RBP10.33□□□□□ -0.76
COX6A1-203ENST00000550009 KRTAP10-4P60372 401 aaPredicted RBP10.33□□□□□ -0.76
COX6A1-203ENST00000550009 KCNIP4Q6PIL6 250 aa10.33□□□□□ -0.76
COX6A1-203ENST00000550009 C9orf62Q8N4C0 152 aa10.33□□□□□ -0.76
COX6A1-203ENST00000550009 C1orf43Q9BWL3 253 aa10.33□□□□□ -0.76
COX6A1-203ENST00000550009 COX11Q9Y6N1 276 aa10.33□□□□□ -0.76
COX6A1-203ENST00000550009 IGLV4-60A0A075B6I1 120 aa10.32□□□□□ -0.76
COX6A1-203ENST00000550009 P01737 135 aa10.32□□□□□ -0.76
COX6A1-203ENST00000550009 PRSS1P07477 247 aa10.32□□□□□ -0.76
COX6A1-203ENST00000550009 NTF3P20783 257 aa10.32□□□□□ -0.76
COX6A1-203ENST00000550009 ELOBQ15370 118 aa10.32□□□□□ -0.76
COX6A1-203ENST00000550009 SLC51BQ86UW2 128 aa10.32□□□□□ -0.76
COX6A1-203ENST00000550009 OCC1Q8TAD7 63 aa10.32□□□□□ -0.76
COX6A1-203ENST00000550009 IGLV10-54A0A075B6I4 117 aa10.31□□□□□ -0.76
COX6A1-203ENST00000550009 TRAV26-2A0A0B4J265 109 aa10.31□□□□□ -0.76
COX6A1-203ENST00000550009 PDE6DO43924 150 aa10.31□□□□□ -0.76
COX6A1-203ENST00000550009 CRPP02741 224 aa10.31□□□□□ -0.76
COX6A1-203ENST00000550009 Q0VG73 95 aa10.31□□□□□ -0.76
COX6A1-203ENST00000550009 ALKAL2Q6UX46 152 aa10.31□□□□□ -0.76
COX6A1-203ENST00000550009 C20orf203Q8NBC4 194 aa10.31□□□□□ -0.76
COX6A1-203ENST00000550009 CIRBP-AS1Q8TBR5 109 aa10.31□□□□□ -0.76
COX6A1-203ENST00000550009 PRR34Q9NV39 138 aa10.31□□□□□ -0.76
COX6A1-203ENST00000550009 PANO1I0J062 215 aa10.3□□□□□ -0.76
COX6A1-203ENST00000550009 IFNA1P01562 189 aa10.3□□□□□ -0.76
COX6A1-203ENST00000550009 RPS20P60866 119 aaKnown RBP10.3□□□□□ -0.76
COX6A1-203ENST00000550009 CACNG7P62955 275 aa10.3□□□□□ -0.76
COX6A1-203ENST00000550009 IQCJQ1A5X6 159 aa10.3□□□□□ -0.76
COX6A1-203ENST00000550009 EIF5AL1Q6IS14 154 aaKnown RBP10.3□□□□□ -0.76
COX6A1-203ENST00000550009 TRBV25-1A0A075B6N4 114 aa10.29□□□□□ -0.76
COX6A1-203ENST00000550009 CTRLP40313 264 aa10.29□□□□□ -0.76
COX6A1-203ENST00000550009 GTSF1Q8WW33 167 aa10.29□□□□□ -0.76
COX6A1-203ENST00000550009 CHAC1Q9BUX1 264 aa10.29□□□□□ -0.76
COX6A1-203ENST00000550009 IGHV1-24A0A0C4DH33 117 aa10.28□□□□□ -0.76
COX6A1-203ENST00000550009 TEX46H3BTG2 121 aa10.28□□□□□ -0.76
COX6A1-203ENST00000550009 RASL11AQ6T310 242 aa10.28□□□□□ -0.76
COX6A1-203ENST00000550009 GATD1Q8NB37 220 aa10.28□□□□□ -0.76
COX6A1-203ENST00000550009 RPL39LQ96EH5 51 aaKnown RBP10.28□□□□□ -0.76
COX6A1-203ENST00000550009 DPH3P1Q9H4G8 78 aa10.28□□□□□ -0.76
COX6A1-203ENST00000550009 SMIM12Q96EX1 92 aa10.27□□□□□ -0.77
COX6A1-203ENST00000550009 RPP21Q9H633 154 aaKnown RBP10.27□□□□□ -0.77
COX6A1-203ENST00000550009 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.27□□□□□ -0.77
COX6A1-203ENST00000550009 F2Z2F3 143 aa10.26□□□□□ -0.77
COX6A1-203ENST00000550009 GAS8-AS1O95177 125 aa10.26□□□□□ -0.77
COX6A1-203ENST00000550009 REG3AQ06141 175 aa10.26□□□□□ -0.77
COX6A1-203ENST00000550009 TWIST1Q15672 202 aa10.26□□□□□ -0.77
COX6A1-203ENST00000550009 MIAQ16674 131 aa10.26□□□□□ -0.77
COX6A1-203ENST00000550009 SLPIP03973 132 aa10.25□□□□□ -0.77
COX6A1-203ENST00000550009 TMEM243Q9BU79 118 aa10.25□□□□□ -0.77
COX6A1-203ENST00000550009 NIT2Q9NQR4 276 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 192.7 ms