RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 INSL4Q14641 139 aa2.24□□□□□ -2.05
PRIM1-204ENST00000549549 CASKIN1Q8WXD9 1431 aa2.24□□□□□ -2.05
PRIM1-204ENST00000549549 RBM3P98179 157 aaKnown RBP2.23□□□□□ -2.05
PRIM1-204ENST00000549549 PRB3Q04118 309 aaPredicted RBP2.23□□□□□ -2.05
PRIM1-204ENST00000549549 GNG8Q9UK08 70 aa2.23□□□□□ -2.05
PRIM1-204ENST00000549549 RIMS1Q86UR5 1692 aaKnown RBP2.22□□□□□ -2.05
PRIM1-204ENST00000549549 RBBP6Q7Z6E9 1792 aaKnown RBP2.21□□□□□ -2.06
PRIM1-204ENST00000549549 A0A0D9SG42 100 aa2.21□□□□□ -2.06
PRIM1-204ENST00000549549 CATR1Q13166 79 aa2.21□□□□□ -2.06
PRIM1-204ENST00000549549 C6orf52Q5T4I8 152 aa2.21□□□□□ -2.06
PRIM1-204ENST00000549549 CRCT1Q9UGL9 99 aa2.21□□□□□ -2.06
PRIM1-204ENST00000549549 V9GYV3 84 aa2.21□□□□□ -2.06
PRIM1-204ENST00000549549 KTN1Q86UP2 1357 aaKnown RBP2.21□□□□□ -2.06
PRIM1-204ENST00000549549 SIX6O95475 246 aa2.2□□□□□ -2.06
PRIM1-204ENST00000549549 GNG4P50150 75 aa2.2□□□□□ -2.06
PRIM1-204ENST00000549549 PPP3R2Q96LZ3 170 aa2.2□□□□□ -2.06
PRIM1-204ENST00000549549 KIAA0100Q14667 2235 aaKnown RBP2.19□□□□□ -2.06
PRIM1-204ENST00000549549 TRAV13-2A0A0B4J235 113 aa2.19□□□□□ -2.06
PRIM1-204ENST00000549549 HCG22E2RYF7 251 aa2.19□□□□□ -2.06
PRIM1-204ENST00000549549 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
PRIM1-204ENST00000549549 EDDM3BP56851 147 aa2.19□□□□□ -2.06
PRIM1-204ENST00000549549 TPPP2P59282 170 aa2.19□□□□□ -2.06
PRIM1-204ENST00000549549 NWD2Q9ULI1 1742 aa2.18□□□□□ -2.06
PRIM1-204ENST00000549549 SNAPC5O75971 98 aa2.18□□□□□ -2.06
PRIM1-204ENST00000549549 WHAMMP3Q1A5X7 153 aa2.18□□□□□ -2.06
PRIM1-204ENST00000549549 Q96NJ1 140 aa2.18□□□□□ -2.06
PRIM1-204ENST00000549549 LINC00312Q9Y6C7 94 aa2.18□□□□□ -2.06
PRIM1-204ENST00000549549 ZDBF2Q9HCK1 2354 aa2.17□□□□□ -2.06
PRIM1-204ENST00000549549 LRRC37A3O60309 1634 aa2.17□□□□□ -2.06
PRIM1-204ENST00000549549 MRPL54Q6P161 138 aaKnown RBP2.17□□□□□ -2.06
PRIM1-204ENST00000549549 CGREF1Q99674 301 aa2.17□□□□□ -2.06
PRIM1-204ENST00000549549 IER3IP1Q9Y5U9 82 aa2.17□□□□□ -2.06
PRIM1-204ENST00000549549 PXDNQ92626 1479 aa2.16□□□□□ -2.06
PRIM1-204ENST00000549549 MRPS10P82664 201 aaKnown RBP2.16□□□□□ -2.06
PRIM1-204ENST00000549549 FBN3Q75N90 2809 aa2.15□□□□□ -2.07
PRIM1-204ENST00000549549 PARP14Q460N5 1801 aa2.14□□□□□ -2.07
PRIM1-204ENST00000549549 C8orf59Q8N0T1 100 aaPredicted RBP2.14□□□□□ -2.07
PRIM1-204ENST00000549549 OOSP1A8MZH6 123 aa2.13□□□□□ -2.07
PRIM1-204ENST00000549549 CPSF1Q10570 1443 aaKnown RBP2.13□□□□□ -2.07
PRIM1-204ENST00000549549 TENM1Q9UKZ4 2725 aa2.12□□□□□ -2.07
PRIM1-204ENST00000549549 C9orf153Q5TBE3 101 aa2.12□□□□□ -2.07
PRIM1-204ENST00000549549 S100A1P23297 94 aa2.11□□□□□ -2.07
PRIM1-204ENST00000549549 PPP3R1P63098 170 aa2.11□□□□□ -2.07
PRIM1-204ENST00000549549 TANC1Q9C0D5 1861 aa2.11□□□□□ -2.07
PRIM1-204ENST00000549549 S100PP25815 95 aa2.1□□□□□ -2.07
PRIM1-204ENST00000549549 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.1□□□□□ -2.07
PRIM1-204ENST00000549549 C5orf38Q86SI9 138 aa2.1□□□□□ -2.07
PRIM1-204ENST00000549549 ARAP2Q8WZ64 1704 aa2.1□□□□□ -2.07
PRIM1-204ENST00000549549 CDK13Q14004 1512 aaKnown RBP2.1□□□□□ -2.07
PRIM1-204ENST00000549549 LOC285556D6RIA3 1793 aa2.1□□□□□ -2.07
PRIM1-204ENST00000549549 SIPA1L3O60292 1781 aaPredicted RBP2.1□□□□□ -2.07
PRIM1-204ENST00000549549 SPANXDQ9BXN6 97 aa2.09□□□□□ -2.07
PRIM1-204ENST00000549549 ARFGEF1Q9Y6D6 1849 aa2.08□□□□□ -2.08
PRIM1-204ENST00000549549 F2Z2F3 143 aa2.08□□□□□ -2.08
PRIM1-204ENST00000549549 AQP10Q96PS8 301 aa2.08□□□□□ -2.08
PRIM1-204ENST00000549549 BPESC1Q9GZL8 116 aa2.08□□□□□ -2.08
PRIM1-204ENST00000549549 TNS1Q9HBL0 1735 aaKnown RBP2.08□□□□□ -2.08
PRIM1-204ENST00000549549 PZPP20742 1482 aa2.07□□□□□ -2.08
PRIM1-204ENST00000549549 GVQW2A0A096LPI5 108 aaPredicted RBP2.07□□□□□ -2.08
PRIM1-204ENST00000549549 WFDC6Q9BQY6 131 aa2.07□□□□□ -2.08
PRIM1-204ENST00000549549 ASH1LQ9NR48 2969 aaKnown RBP2.06□□□□□ -2.08
PRIM1-204ENST00000549549 C10orf95Q9H7T3 257 aa2.06□□□□□ -2.08
PRIM1-204ENST00000549549 ROBO1Q9Y6N7 1651 aa2.06□□□□□ -2.08
PRIM1-204ENST00000549549 PATJQ8NI35 1801 aa2.05□□□□□ -2.08
PRIM1-204ENST00000549549 COMMD6Q7Z4G1 85 aa2.05□□□□□ -2.08
PRIM1-204ENST00000549549 SMIM11BQ8TCY0 68 aa2.05□□□□□ -2.08
PRIM1-204ENST00000549549 PPIP5K1Q6PFW1 1433 aa2.05□□□□□ -2.08
PRIM1-204ENST00000549549 TRGV1A0A0A0MS02 117 aa2.04□□□□□ -2.08
PRIM1-204ENST00000549549 KNTC1P50748 2209 aa2.04□□□□□ -2.08
PRIM1-204ENST00000549549 SSSCA1O60232 199 aa2.03□□□□□ -2.08
PRIM1-204ENST00000549549 ACYP2P14621 99 aa2.03□□□□□ -2.08
PRIM1-204ENST00000549549 CYP4F30PQ9H0H9 118 aa2.03□□□□□ -2.08
PRIM1-204ENST00000549549 SHROOM2Q13796 1616 aa2.02□□□□□ -2.09
PRIM1-204ENST00000549549 NRKQ7Z2Y5 1582 aa2.02□□□□□ -2.09
PRIM1-204ENST00000549549 MAPKBP1O60336 1514 aa2.02□□□□□ -2.09
PRIM1-204ENST00000549549 C10orf128Q5T292 105 aa2.02□□□□□ -2.09
PRIM1-204ENST00000549549 FAM103A1Q9BTL3 118 aaKnown RBP2.02□□□□□ -2.09
PRIM1-204ENST00000549549 SCP2D1Q9UJQ7 156 aa2.02□□□□□ -2.09
PRIM1-204ENST00000549549 ABCA1O95477 2261 aa2.02□□□□□ -2.09
PRIM1-204ENST00000549549 SSC5DA1L4H1 1573 aa2.02□□□□□ -2.09
PRIM1-204ENST00000549549 TTC9CQ8N5M4 171 aa2.01□□□□□ -2.09
PRIM1-204ENST00000549549 VMO1Q7Z5L0 202 aa2□□□□□ -2.09
PRIM1-204ENST00000549549 MED13LQ71F56 2210 aa2□□□□□ -2.09
PRIM1-204ENST00000549549 DOCK1Q14185 1865 aa1.99□□□□□ -2.09
PRIM1-204ENST00000549549 C20orf202A1L168 122 aa1.99□□□□□ -2.09
PRIM1-204ENST00000549549 CCL18P55774 89 aa1.99□□□□□ -2.09
PRIM1-204ENST00000549549 LENEPQ9Y5L5 61 aa1.98□□□□□ -2.09
PRIM1-204ENST00000549549 UBE2L5PA0A1B0GUS4 154 aa1.97□□□□□ -2.09
PRIM1-204ENST00000549549 TMEM14DPA8MWL7 114 aa1.97□□□□□ -2.09
PRIM1-204ENST00000549549 UBE2L3P68036 154 aaKnown RBP1.97□□□□□ -2.09
PRIM1-204ENST00000549549 PRR15LQ9BU68 103 aa1.97□□□□□ -2.09
PRIM1-204ENST00000549549 PPP1R17O96001 155 aa1.96□□□□□ -2.1
PRIM1-204ENST00000549549 Q5VV11 94 aa1.96□□□□□ -2.1
PRIM1-204ENST00000549549 SVBPQ8N300 66 aa1.96□□□□□ -2.1
PRIM1-204ENST00000549549 TCEAL7Q9BRU2 100 aa1.96□□□□□ -2.1
PRIM1-204ENST00000549549 KRTAP4-1Q9BYQ7 146 aa1.96□□□□□ -2.1
PRIM1-204ENST00000549549 DPH3P1Q9H4G8 78 aa1.96□□□□□ -2.1
PRIM1-204ENST00000549549 MRC1P22897 1456 aa1.95□□□□□ -2.1
PRIM1-204ENST00000549549 PRDM2Q13029 1718 aa1.95□□□□□ -2.1
PRIM1-204ENST00000549549 FAM24AA6NFZ4 105 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms