RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 Q6ZQY7 126 aa1.59□□□□□ -2.15
USP15-213ENST00000549268 CCL19Q99731 98 aa1.59□□□□□ -2.15
USP15-213ENST00000549268 SETBP1Q9Y6X0 1596 aa1.59□□□□□ -2.16
USP15-213ENST00000549268 SNRNP200O75643 2136 aaKnown RBP1.58□□□□□ -2.16
USP15-213ENST00000549268 ZNF142P52746 1687 aaPredicted RBP1.58□□□□□ -2.16
USP15-213ENST00000549268 CFAP43Q8NDM7 1665 aa1.58□□□□□ -2.16
USP15-213ENST00000549268 KIAA0100Q14667 2235 aaKnown RBP1.58□□□□□ -2.16
USP15-213ENST00000549268 ABCA4P78363 2273 aa1.58□□□□□ -2.16
USP15-213ENST00000549268 Q86TA4 180 aa1.58□□□□□ -2.16
USP15-213ENST00000549268 SVBPQ8N300 66 aa1.58□□□□□ -2.16
USP15-213ENST00000549268 SPANXDQ9BXN6 97 aa1.58□□□□□ -2.16
USP15-213ENST00000549268 PDE4DIPQ5VU43 2346 aa1.58□□□□□ -2.16
USP15-213ENST00000549268 CCNB3Q8WWL7 1395 aa1.58□□□□□ -2.16
USP15-213ENST00000549268 BLMP54132 1417 aaPredicted RBP1.57□□□□□ -2.16
USP15-213ENST00000549268 CITO14578 2027 aa1.57□□□□□ -2.16
USP15-213ENST00000549268 DIP2BQ9P265 1576 aa1.57□□□□□ -2.16
USP15-213ENST00000549268 TMEM218A2RU14 115 aa1.57□□□□□ -2.16
USP15-213ENST00000549268 IFITM1P13164 125 aa1.57□□□□□ -2.16
USP15-213ENST00000549268 UBE2D1P51668 147 aa1.57□□□□□ -2.16
USP15-213ENST00000549268 C8orf59Q8N0T1 100 aaPredicted RBP1.57□□□□□ -2.16
USP15-213ENST00000549268 FLG2Q5D862 2391 aaPredicted RBP1.57□□□□□ -2.16
USP15-213ENST00000549268 CHD6Q8TD26 2715 aa1.57□□□□□ -2.16
USP15-213ENST00000549268 RP1L1Q8IWN7 2480 aaPredicted RBP1.57□□□□□ -2.16
USP15-213ENST00000549268 CHD8Q9HCK8 2581 aa1.56□□□□□ -2.16
USP15-213ENST00000549268 GAPVD1Q14C86 1478 aa1.56□□□□□ -2.16
USP15-213ENST00000549268 ABCC10Q5T3U5 1492 aa1.56□□□□□ -2.16
USP15-213ENST00000549268 ASCC3Q8N3C0 2202 aaKnown RBP1.56□□□□□ -2.16
USP15-213ENST00000549268 MAST4O15021 2626 aa1.56□□□□□ -2.16
USP15-213ENST00000549268 HELZ2Q9BYK8 2649 aaKnown RBP1.56□□□□□ -2.16
USP15-213ENST00000549268 ZFYVE16Q7Z3T8 1539 aa1.56□□□□□ -2.16
USP15-213ENST00000549268 NRKQ7Z2Y5 1582 aa1.56□□□□□ -2.16
USP15-213ENST00000549268 GOLGB1Q14789 3259 aaKnown RBP1.56□□□□□ -2.16
USP15-213ENST00000549268 ROBO1Q9Y6N7 1651 aa1.56□□□□□ -2.16
USP15-213ENST00000549268 PIGBOS1A0A0B4J2F0 54 aa1.56□□□□□ -2.16
USP15-213ENST00000549268 HCG22E2RYF7 251 aa1.56□□□□□ -2.16
USP15-213ENST00000549268 SPINK8P0C7L1 97 aa1.56□□□□□ -2.16
USP15-213ENST00000549268 CAV3P56539 151 aa1.56□□□□□ -2.16
USP15-213ENST00000549268 CCL8P80075 99 aa1.56□□□□□ -2.16
USP15-213ENST00000549268 C5orf38Q86SI9 138 aa1.56□□□□□ -2.16
USP15-213ENST00000549268 C20orf197Q8N268 126 aa1.56□□□□□ -2.16
USP15-213ENST00000549268 CPSF1Q10570 1443 aaKnown RBP1.56□□□□□ -2.16
USP15-213ENST00000549268 MAPKBP1O60336 1514 aa1.56□□□□□ -2.16
USP15-213ENST00000549268 TRAV13-2A0A0B4J235 113 aa1.55□□□□□ -2.16
USP15-213ENST00000549268 FXYD1O00168 92 aa1.55□□□□□ -2.16
USP15-213ENST00000549268 CCL3L1P16619 93 aa1.55□□□□□ -2.16
USP15-213ENST00000549268 CNTLNQ9NXG0 1405 aa1.55□□□□□ -2.16
USP15-213ENST00000549268 TRAV30A0A087WSZ9 112 aa1.54□□□□□ -2.16
USP15-213ENST00000549268 CLPSL1A2RUU4 121 aa1.54□□□□□ -2.16
USP15-213ENST00000549268 ZNF56Q15929 161 aa1.54□□□□□ -2.16
USP15-213ENST00000549268 LINC00575Q6W349 94 aa1.54□□□□□ -2.16
USP15-213ENST00000549268 ZNF818PQ6ZRF7 136 aa1.54□□□□□ -2.16
USP15-213ENST00000549268 TENM1Q9UKZ4 2725 aa1.54□□□□□ -2.16
USP15-213ENST00000549268 CASKIN1Q8WXD9 1431 aa1.54□□□□□ -2.16
USP15-213ENST00000549268 CLASP1Q7Z460 1538 aa1.54□□□□□ -2.16
USP15-213ENST00000549268 NHSL1Q5SYE7 1610 aa1.54□□□□□ -2.16
USP15-213ENST00000549268 AFDNP55196 1824 aaKnown RBP1.54□□□□□ -2.16
USP15-213ENST00000549268 DLG5Q8TDM6 1919 aa1.54□□□□□ -2.16
USP15-213ENST00000549268 SPTBP11277 2137 aa1.54□□□□□ -2.16
USP15-213ENST00000549268 KMT2BQ9UMN6 2715 aaPredicted RBP1.53□□□□□ -2.16
USP15-213ENST00000549268 UNC80Q8N2C7 3258 aa1.53□□□□□ -2.16
USP15-213ENST00000549268 TRBV30A0A0K0K1B3 111 aa1.53□□□□□ -2.16
USP15-213ENST00000549268 A0A1W2PPM0 123 aa1.53□□□□□ -2.16
USP15-213ENST00000549268 FAM24AA6NFZ4 105 aa1.53□□□□□ -2.16
USP15-213ENST00000549268 KIF21BO75037 1637 aa1.53□□□□□ -2.16
USP15-213ENST00000549268 SIX6O95475 246 aa1.53□□□□□ -2.16
USP15-213ENST00000549268 S100A8P05109 93 aa1.53□□□□□ -2.16
USP15-213ENST00000549268 ESPL1Q14674 2120 aa1.53□□□□□ -2.16
USP15-213ENST00000549268 VPS8Q8N3P4 1428 aa1.53□□□□□ -2.16
USP15-213ENST00000549268 PREX1Q8TCU6 1659 aa1.53□□□□□ -2.16
USP15-213ENST00000549268 ARAP2Q8WZ64 1704 aa1.53□□□□□ -2.16
USP15-213ENST00000549268 DPH3P1Q9H4G8 78 aa1.53□□□□□ -2.16
USP15-213ENST00000549268 COL6A3P12111 3177 aa1.53□□□□□ -2.17
USP15-213ENST00000549268 ELOF1P60002 83 aaKnown RBP1.52□□□□□ -2.17
USP15-213ENST00000549268 KLKP1Q107X0 134 aa1.52□□□□□ -2.17
USP15-213ENST00000549268 COMMD6Q7Z4G1 85 aa1.52□□□□□ -2.17
USP15-213ENST00000549268 C4orf33Q8N1A6 199 aa1.52□□□□□ -2.17
USP15-213ENST00000549268 ACBD7Q8N6N7 88 aa1.52□□□□□ -2.17
USP15-213ENST00000549268 COX7B2Q8TF08 81 aa1.52□□□□□ -2.17
USP15-213ENST00000549268 BET1LQ9NYM9 111 aa1.52□□□□□ -2.17
USP15-213ENST00000549268 LINC00312Q9Y6C7 94 aa1.52□□□□□ -2.17
USP15-213ENST00000549268 BDP1A6H8Y1 2624 aa1.52□□□□□ -2.17
USP15-213ENST00000549268 NRXN2Q9P2S2 1712 aa1.52□□□□□ -2.17
USP15-213ENST00000549268 MADDQ8WXG6 1647 aa1.51□□□□□ -2.17
USP15-213ENST00000549268 ZNF292O60281 2723 aa1.51□□□□□ -2.17
USP15-213ENST00000549268 A0A087WTM6 91 aa1.51□□□□□ -2.17
USP15-213ENST00000549268 UBE2L5PA0A1B0GUS4 154 aa1.51□□□□□ -2.17
USP15-213ENST00000549268 UBE2L3P68036 154 aaKnown RBP1.51□□□□□ -2.17
USP15-213ENST00000549268 SSBP1Q04837 148 aaKnown RBP1.51□□□□□ -2.17
USP15-213ENST00000549268 NCMAPQ5T1S8 102 aa1.51□□□□□ -2.17
USP15-213ENST00000549268 TTC9CQ8N5M4 171 aa1.51□□□□□ -2.17
USP15-213ENST00000549268 AQP10Q96PS8 301 aa1.51□□□□□ -2.17
USP15-213ENST00000549268 LINC00474Q9P2X8 69 aa1.51□□□□□ -2.17
USP15-213ENST00000549268 PHIPQ8WWQ0 1821 aa1.5□□□□□ -2.17
USP15-213ENST00000549268 NWD2Q9ULI1 1742 aa1.5□□□□□ -2.17
USP15-213ENST00000549268 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.5□□□□□ -2.17
USP15-213ENST00000549268 SSSCA1O60232 199 aa1.5□□□□□ -2.17
USP15-213ENST00000549268 S100A10P60903 97 aa1.5□□□□□ -2.17
USP15-213ENST00000549268 PIEZO1Q92508 2521 aa1.5□□□□□ -2.17
USP15-213ENST00000549268 PPRC1Q5VV67 1664 aaKnown RBP1.5□□□□□ -2.17
USP15-213ENST00000549268 KIAA0556O60303 1618 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms