RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 SS18L2Q9UHA2 77 aa17.19■□□□□ 0.34
NPAS3-206ENST00000548645 TRBV30A0A0K0K1B3 111 aa17.18■□□□□ 0.34
NPAS3-206ENST00000548645 IGHV4-39P01824 125 aa17.18■□□□□ 0.34
NPAS3-206ENST00000548645 NHLRC4P0CG21 123 aaPredicted RBP17.18■□□□□ 0.34
NPAS3-206ENST00000548645 RPL13AP40429 203 aaKnown RBP17.18■□□□□ 0.34
NPAS3-206ENST00000548645 C9orf85Q96MD7 179 aa17.18■□□□□ 0.34
NPAS3-206ENST00000548645 BRI3O95415 125 aa17.18■□□□□ 0.34
NPAS3-206ENST00000548645 DAZ1Q9NQZ3 744 aaKnown RBP17.18■□□□□ 0.34
NPAS3-206ENST00000548645 TRAV4A0A0B4J268 109 aa17.17■□□□□ 0.34
NPAS3-206ENST00000548645 TRBV10-2A0A0K0K1G8 114 aa17.17■□□□□ 0.34
NPAS3-206ENST00000548645 ELANEP08246 267 aa17.17■□□□□ 0.34
NPAS3-206ENST00000548645 NDUFV3P56181 108 aaKnown RBP17.17■□□□□ 0.34
NPAS3-206ENST00000548645 HRNRQ86YZ3 2850 aaPredicted RBP17.17■□□□□ 0.34
NPAS3-206ENST00000548645 IGHV3-16A0A0C4DH30 117 aa17.17■□□□□ 0.34
NPAS3-206ENST00000548645 A0A0J9YXV3 536 aa17.17■□□□□ 0.34
NPAS3-206ENST00000548645 A0A0J9YXY3 114 aa17.17■□□□□ 0.34
NPAS3-206ENST00000548645 SPTBN1Q01082 2364 aaKnown RBP17.17■□□□□ 0.34
NPAS3-206ENST00000548645 TRAV8-4A0A0B4J246 113 aa17.16■□□□□ 0.34
NPAS3-206ENST00000548645 TTC32Q5I0X7 151 aa17.16■□□□□ 0.34
NPAS3-206ENST00000548645 BPESC1Q9GZL8 116 aa17.16■□□□□ 0.34
NPAS3-206ENST00000548645 B5MCH6 92 aa17.16■□□□□ 0.34
NPAS3-206ENST00000548645 PF4V1P10720 104 aa17.16■□□□□ 0.34
NPAS3-206ENST00000548645 Q6Q795 121 aa17.16■□□□□ 0.34
NPAS3-206ENST00000548645 BEX4Q9NWD9 120 aaPredicted RBP17.16■□□□□ 0.34
NPAS3-206ENST00000548645 IGHV3OR16-10A0A075B7F0 116 aa17.15■□□□□ 0.34
NPAS3-206ENST00000548645 I3L3M4 83 aa17.15■□□□□ 0.34
NPAS3-206ENST00000548645 COL6A6A6NMZ7 2263 aa17.15■□□□□ 0.34
NPAS3-206ENST00000548645 TEX49A0A1B0GTD5 131 aa17.14■□□□□ 0.33
NPAS3-206ENST00000548645 CRLF1O75462 422 aa17.14■□□□□ 0.33
NPAS3-206ENST00000548645 IGLV4-3A0A075B6K6 122 aa17.14■□□□□ 0.33
NPAS3-206ENST00000548645 A0A1W2PPR1 153 aa17.14■□□□□ 0.33
NPAS3-206ENST00000548645 TRIAP1O43715 76 aa17.14■□□□□ 0.33
NPAS3-206ENST00000548645 IFITM1P13164 125 aa17.14■□□□□ 0.33
NPAS3-206ENST00000548645 H3BMM0 161 aa17.13■□□□□ 0.33
NPAS3-206ENST00000548645 UBE2WQ96B02 151 aa17.13■□□□□ 0.33
NPAS3-206ENST00000548645 IGHV3-30-3P0DP02 117 aa17.12■□□□□ 0.33
NPAS3-206ENST00000548645 DCANP1Q8TF63 244 aa17.12■□□□□ 0.33
NPAS3-206ENST00000548645 IGHG2P01859 326 aa17.12■□□□□ 0.33
NPAS3-206ENST00000548645 TIMM21Q9BVV7 248 aa17.12■□□□□ 0.33
NPAS3-206ENST00000548645 ODF3Q96PU9 254 aa17.11■□□□□ 0.33
NPAS3-206ENST00000548645 ZNF580Q9UK33 172 aa17.11■□□□□ 0.33
NPAS3-206ENST00000548645 GAGE12JA6NER3 117 aa17.11■□□□□ 0.33
NPAS3-206ENST00000548645 GAGE7O76087 117 aa17.11■□□□□ 0.33
NPAS3-206ENST00000548645 GAGE12FP0CL80 117 aa17.11■□□□□ 0.33
NPAS3-206ENST00000548645 GAGE12GP0CL81 117 aa17.11■□□□□ 0.33
NPAS3-206ENST00000548645 GAGE12IP0CL82 117 aa17.11■□□□□ 0.33
NPAS3-206ENST00000548645 GAGE4Q13068 117 aa17.11■□□□□ 0.33
NPAS3-206ENST00000548645 SPXQ9BT56 116 aa17.11■□□□□ 0.33
NPAS3-206ENST00000548645 UBTD1Q9HAC8 227 aa17.11■□□□□ 0.33
NPAS3-206ENST00000548645 SVEP1Q4LDE5 3571 aa17.1■□□□□ 0.33
NPAS3-206ENST00000548645 PRSS2P07478 247 aa17.1■□□□□ 0.33
NPAS3-206ENST00000548645 C2orf82Q6UX34 121 aa17.1■□□□□ 0.33
NPAS3-206ENST00000548645 K7EMT4 169 aa17.1■□□□□ 0.33
NPAS3-206ENST00000548645 BRD3OSQ6XYD6 125 aa17.09■□□□□ 0.33
NPAS3-206ENST00000548645 C15orf53Q8NAA6 179 aa17.09■□□□□ 0.33
NPAS3-206ENST00000548645 LITAFQ99732 161 aa17.09■□□□□ 0.33
NPAS3-206ENST00000548645 COX6CP09669 75 aa17.09■□□□□ 0.33
NPAS3-206ENST00000548645 ICOSQ9Y6W8 199 aa17.09■□□□□ 0.33
NPAS3-206ENST00000548645 LY6EQ16553 131 aa17.08■□□□□ 0.33
NPAS3-206ENST00000548645 ADARB2-AS1A8MUL3 147 aa17.08■□□□□ 0.32
NPAS3-206ENST00000548645 TRAV12-2A0A075B6T6 113 aa17.07■□□□□ 0.32
NPAS3-206ENST00000548645 IGHV1OR15-1A0A075B7D0 117 aa17.07■□□□□ 0.32
NPAS3-206ENST00000548645 PYGO1Q9Y3Y4 419 aa17.07■□□□□ 0.32
NPAS3-206ENST00000548645 H3BT86 120 aa17.07■□□□□ 0.32
NPAS3-206ENST00000548645 CD28P10747 220 aa17.07■□□□□ 0.32
NPAS3-206ENST00000548645 EDN2P20800 178 aa17.07■□□□□ 0.32
NPAS3-206ENST00000548645 SPANXDQ9BXN6 97 aa17.07■□□□□ 0.32
NPAS3-206ENST00000548645 SPANXCQ9NY87 97 aa17.07■□□□□ 0.32
NPAS3-206ENST00000548645 MRPS36P82909 103 aaKnown RBP17.06■□□□□ 0.32
NPAS3-206ENST00000548645 H7C423 109 aa17.05■□□□□ 0.32
NPAS3-206ENST00000548645 IGKV3-20P01619 116 aa17.05■□□□□ 0.32
NPAS3-206ENST00000548645 IGHV1-58A0A0C4DH39 117 aa17.04■□□□□ 0.32
NPAS3-206ENST00000548645 MRPL23Q16540 153 aaKnown RBP17.04■□□□□ 0.32
NPAS3-206ENST00000548645 NDUFA12Q9UI09 145 aa17.04■□□□□ 0.32
NPAS3-206ENST00000548645 ITPR1Q14643 2758 aa17.04■□□□□ 0.32
NPAS3-206ENST00000548645 IGLV1-40P01703 118 aa17.04■□□□□ 0.32
NPAS3-206ENST00000548645 CCDC179H3BU77 68 aa17.03■□□□□ 0.32
NPAS3-206ENST00000548645 ASH1LQ9NR48 2969 aaKnown RBP17.03■□□□□ 0.32
NPAS3-206ENST00000548645 TRAV8-3A0A0A6YYJ7 113 aa17.03■□□□□ 0.32
NPAS3-206ENST00000548645 SNRPD3P62318 126 aaKnown RBP17.03■□□□□ 0.32
NPAS3-206ENST00000548645 MIAQ16674 131 aa17.03■□□□□ 0.32
NPAS3-206ENST00000548645 ADAMTSL4-AS1Q5T5F5 129 aa17.03■□□□□ 0.32
NPAS3-206ENST00000548645 CACNA1AO00555 2505 aa17.02■□□□□ 0.32
NPAS3-206ENST00000548645 BLCAPP62952 87 aa17.02■□□□□ 0.31
NPAS3-206ENST00000548645 SPANXA1Q9NS26 97 aa17.02■□□□□ 0.31
NPAS3-206ENST00000548645 ACACBO00763 2458 aa17.02■□□□□ 0.31
NPAS3-206ENST00000548645 H3BUX3 64 aa17.01■□□□□ 0.31
NPAS3-206ENST00000548645 A6NDX4 124 aa17.01■□□□□ 0.31
NPAS3-206ENST00000548645 KLRB1Q12918 225 aa17■□□□□ 0.31
NPAS3-206ENST00000548645 PKD1L2Q7Z442 2459 aa17■□□□□ 0.31
NPAS3-206ENST00000548645 PRRC2AP48634 2157 aaKnown RBP17■□□□□ 0.31
NPAS3-206ENST00000548645 SPINK13Q1W4C9 94 aa17■□□□□ 0.31
NPAS3-206ENST00000548645 YAE1D1Q9NRH1 226 aa17■□□□□ 0.31
NPAS3-206ENST00000548645 TRGV11A0A075B6L2 103 aa16.99■□□□□ 0.31
NPAS3-206ENST00000548645 FAM240AA0A1B0GVK7 77 aa16.99■□□□□ 0.31
NPAS3-206ENST00000548645 FAM104AQ969W3 186 aa16.99■□□□□ 0.31
NPAS3-206ENST00000548645 VSIG2Q96IQ7 327 aa16.99■□□□□ 0.31
NPAS3-206ENST00000548645 LST1O00453 97 aa16.98■□□□□ 0.31
NPAS3-206ENST00000548645 EDA2RQ9HAV5 297 aa16.98■□□□□ 0.31
NPAS3-206ENST00000548645 CLEC2BQ92478 149 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms