RNA–Protein interactions for RNA: ENST00000546843.2

R3HDM2-209, Transcript of R3H domain containing 2, humanhuman

TSL 5

Gene R3HDM2, Length 823 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-209ENST00000546843 TWIST1Q15672 202 aa11.26□□□□□ -0.61
R3HDM2-209ENST00000546843 PGLYRP4Q96LB8 373 aa11.26□□□□□ -0.61
R3HDM2-209ENST00000546843 FUSP35637 526 aaKnown RBP eCLIP11.25□□□□□ -0.61
R3HDM2-209ENST00000546843 DAZ4Q86SG3 579 aaKnown RBP11.25□□□□□ -0.61
R3HDM2-209ENST00000546843 CNFNQ9BYD5 112 aa11.25□□□□□ -0.61
R3HDM2-209ENST00000546843 DPH3P1Q9H4G8 78 aa11.25□□□□□ -0.61
R3HDM2-209ENST00000546843 DAZ3Q9NR90 486 aaKnown RBP11.25□□□□□ -0.61
R3HDM2-209ENST00000546843 A8MWL6 223 aa11.24□□□□□ -0.61
R3HDM2-209ENST00000546843 M0QY20 66 aa11.24□□□□□ -0.61
R3HDM2-209ENST00000546843 PEA15Q15121 130 aa11.24□□□□□ -0.61
R3HDM2-209ENST00000546843 FOXA3P55318 350 aaPredicted RBP11.23□□□□□ -0.61
R3HDM2-209ENST00000546843 WDR73Q6P4I2 378 aa11.23□□□□□ -0.61
R3HDM2-209ENST00000546843 NIT1Q86X76 327 aa11.23□□□□□ -0.61
R3HDM2-209ENST00000546843 PKHD1P08F94 4074 aa11.22□□□□□ -0.61
R3HDM2-209ENST00000546843 TRBV6-8A0A0A6YYG3 113 aa11.22□□□□□ -0.61
R3HDM2-209ENST00000546843 H7C1H1 209 aa11.22□□□□□ -0.61
R3HDM2-209ENST00000546843 RPL23P62829 140 aaKnown RBP11.22□□□□□ -0.61
R3HDM2-209ENST00000546843 ADIRFQ15847 76 aa11.22□□□□□ -0.61
R3HDM2-209ENST00000546843 TMEM241Q24JQ0 296 aa11.22□□□□□ -0.61
R3HDM2-209ENST00000546843 CT83Q5H943 113 aa11.22□□□□□ -0.61
R3HDM2-209ENST00000546843 ISOC2Q96AB3 205 aa11.22□□□□□ -0.61
R3HDM2-209ENST00000546843 OSTCQ9NRP0 149 aa11.22□□□□□ -0.61
R3HDM2-209ENST00000546843 URGCP-MRPS24S4R325 110 aa11.22□□□□□ -0.61
R3HDM2-209ENST00000546843 A0A087WTM6 91 aa11.21□□□□□ -0.61
R3HDM2-209ENST00000546843 TRAV26-2A0A0B4J265 109 aa11.21□□□□□ -0.61
R3HDM2-209ENST00000546843 PSCAO43653 123 aa11.21□□□□□ -0.61
R3HDM2-209ENST00000546843 RASL11AQ6T310 242 aa11.21□□□□□ -0.61
R3HDM2-209ENST00000546843 DEFB104AQ8WTQ1 72 aa11.21□□□□□ -0.61
R3HDM2-209ENST00000546843 TSKUQ8WUA8 353 aa11.21□□□□□ -0.61
R3HDM2-209ENST00000546843 A0A087WX48 190 aa11.2□□□□□ -0.62
R3HDM2-209ENST00000546843 HIGD1CA8MV81 97 aa11.2□□□□□ -0.62
R3HDM2-209ENST00000546843 TMEM262E9PQX1 116 aa11.2□□□□□ -0.62
R3HDM2-209ENST00000546843 FAM74A3Q4VXF1 159 aa11.2□□□□□ -0.62
R3HDM2-209ENST00000546843 NTM-AS1Q6ZSK4 140 aa11.2□□□□□ -0.62
R3HDM2-209ENST00000546843 C15orf54Q8N8G6 183 aa11.2□□□□□ -0.62
R3HDM2-209ENST00000546843 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.2□□□□□ -0.62
R3HDM2-209ENST00000546843 DNAJC30Q96LL9 226 aa11.2□□□□□ -0.62
R3HDM2-209ENST00000546843 NAT8Q9UHE5 227 aa11.2□□□□□ -0.62
R3HDM2-209ENST00000546843 V9GYV3 84 aa11.2□□□□□ -0.62
R3HDM2-209ENST00000546843 EREGO14944 169 aa11.19□□□□□ -0.62
R3HDM2-209ENST00000546843 LAGE3Q14657 143 aa11.19□□□□□ -0.62
R3HDM2-209ENST00000546843 CHCHD5Q9BSY4 110 aa11.19□□□□□ -0.62
R3HDM2-209ENST00000546843 KLK12Q9UKR0 248 aa11.19□□□□□ -0.62
R3HDM2-209ENST00000546843 MPV17L2Q567V2 206 aa11.18□□□□□ -0.62
R3HDM2-209ENST00000546843 KCNIP4Q6PIL6 250 aa11.18□□□□□ -0.62
R3HDM2-209ENST00000546843 SMIM15Q7Z3B0 74 aa11.18□□□□□ -0.62
R3HDM2-209ENST00000546843 GATD1Q8NB37 220 aa11.18□□□□□ -0.62
R3HDM2-209ENST00000546843 BORCS7Q96B45 105 aa11.18□□□□□ -0.62
R3HDM2-209ENST00000546843 KIAA1109Q2LD37 5005 aa11.17□□□□□ -0.62
R3HDM2-209ENST00000546843 GAGE6Q13070 117 aa11.17□□□□□ -0.62
R3HDM2-209ENST00000546843 RPL39LQ96EH5 51 aaKnown RBP11.17□□□□□ -0.62
R3HDM2-209ENST00000546843 GFRA4Q9GZZ7 299 aa11.17□□□□□ -0.62
R3HDM2-209ENST00000546843 SMDT1Q9H4I9 107 aa11.17□□□□□ -0.62
R3HDM2-209ENST00000546843 NIT2Q9NQR4 276 aa11.17□□□□□ -0.62
R3HDM2-209ENST00000546843 A0A1B0GUT8 65 aa11.16□□□□□ -0.62
R3HDM2-209ENST00000546843 RAB14P61106 215 aa11.16□□□□□ -0.62
R3HDM2-209ENST00000546843 Q8N976 141 aa11.16□□□□□ -0.62
R3HDM2-209ENST00000546843 UBE2WQ96B02 151 aa11.16□□□□□ -0.62
R3HDM2-209ENST00000546843 TRBV25-1A0A075B6N4 114 aa11.15□□□□□ -0.62
R3HDM2-209ENST00000546843 TRAV8-3A0A0A6YYJ7 113 aa11.15□□□□□ -0.62
R3HDM2-209ENST00000546843 LRCOL1A6NCL2 159 aa11.15□□□□□ -0.62
R3HDM2-209ENST00000546843 TMEM97Q5BJF2 176 aa11.15□□□□□ -0.62
R3HDM2-209ENST00000546843 NUP35Q8NFH5 326 aa11.15□□□□□ -0.62
R3HDM2-209ENST00000546843 CHCHD7Q9BUK0 85 aa11.15□□□□□ -0.62
R3HDM2-209ENST00000546843 IGHV1-24A0A0C4DH33 117 aa11.14□□□□□ -0.63
R3HDM2-209ENST00000546843 FAM231BA6NCW3 169 aa11.14□□□□□ -0.63
R3HDM2-209ENST00000546843 LECT2O14960 151 aa11.14□□□□□ -0.63
R3HDM2-209ENST00000546843 WFDC2Q14508 124 aa11.14□□□□□ -0.63
R3HDM2-209ENST00000546843 ATRAIDQ6UW56 229 aa11.14□□□□□ -0.63
R3HDM2-209ENST00000546843 TM2D2Q9BX73 214 aa11.14□□□□□ -0.63
R3HDM2-209ENST00000546843 IGKV2D-24A0A075B6R9 120 aa11.13□□□□□ -0.63
R3HDM2-209ENST00000546843 GAS8-AS1O95177 125 aa11.13□□□□□ -0.63
R3HDM2-209ENST00000546843 ANGP03950 147 aaKnown RBP11.13□□□□□ -0.63
R3HDM2-209ENST00000546843 IFITM2Q01629 132 aa11.13□□□□□ -0.63
R3HDM2-209ENST00000546843 ELOBQ15370 118 aa11.13□□□□□ -0.63
R3HDM2-209ENST00000546843 IQCJQ1A5X6 159 aa11.13□□□□□ -0.63
R3HDM2-209ENST00000546843 CLPSL2Q6UWE3 100 aa11.13□□□□□ -0.63
R3HDM2-209ENST00000546843 LRP1BQ9NZR2 4599 aa11.13□□□□□ -0.63
R3HDM2-209ENST00000546843 HERC2O95714 4834 aa11.13□□□□□ -0.63
R3HDM2-209ENST00000546843 RBX1P62877 108 aa11.12□□□□□ -0.63
R3HDM2-209ENST00000546843 AMN1Q8IY45 258 aa11.12□□□□□ -0.63
R3HDM2-209ENST00000546843 MAPKAPK5-AS1Q8N8E1 139 aa11.12□□□□□ -0.63
R3HDM2-209ENST00000546843 RNF185Q96GF1 192 aa11.12□□□□□ -0.63
R3HDM2-209ENST00000546843 TMEM243Q9BU79 118 aa11.12□□□□□ -0.63
R3HDM2-209ENST00000546843 PGPEP1Q9NXJ5 209 aa11.12□□□□□ -0.63
R3HDM2-209ENST00000546843 NAT8BQ9UHF3 227 aa11.12□□□□□ -0.63
R3HDM2-209ENST00000546843 CRPP02741 224 aa11.11□□□□□ -0.63
R3HDM2-209ENST00000546843 RIGQ13278 110 aa11.11□□□□□ -0.63
R3HDM2-209ENST00000546843 COTL1Q14019 142 aa11.11□□□□□ -0.63
R3HDM2-209ENST00000546843 CLLU1Q5K131 121 aa11.11□□□□□ -0.63
R3HDM2-209ENST00000546843 TMEM191AQ9H0A3 160 aa11.11□□□□□ -0.63
R3HDM2-209ENST00000546843 SMIM27A0A1W2PRY6 76 aa11.1□□□□□ -0.63
R3HDM2-209ENST00000546843 AMTP48728 403 aa11.1□□□□□ -0.63
R3HDM2-209ENST00000546843 PKIAP61925 76 aa11.1□□□□□ -0.63
R3HDM2-209ENST00000546843 ENHOQ6UWT2 76 aa11.1□□□□□ -0.63
R3HDM2-209ENST00000546843 Q8N814 137 aa11.1□□□□□ -0.63
R3HDM2-209ENST00000546843 RMI2Q96E14 147 aa11.1□□□□□ -0.63
R3HDM2-209ENST00000546843 SMKR1H3BMG3 65 aa11.09□□□□□ -0.63
R3HDM2-209ENST00000546843 NCR2O95944 276 aa11.09□□□□□ -0.63
R3HDM2-209ENST00000546843 CDPF1Q6NVV7 123 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms