RNA–Protein interactions for RNA: ENST00000543585.1

SCNN1A-220, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-220ENST00000543585 GTSF1Q8WW33 167 aa10.55□□□□□ -0.72
SCNN1A-220ENST00000543585 DNAH8Q96JB1 4490 aa10.54□□□□□ -0.72
SCNN1A-220ENST00000543585 XKRY2A2RUG3 117 aa10.54□□□□□ -0.72
SCNN1A-220ENST00000543585 F2Z2F3 143 aa10.54□□□□□ -0.72
SCNN1A-220ENST00000543585 M0QY20 66 aa10.54□□□□□ -0.72
SCNN1A-220ENST00000543585 MGPP08493 103 aa10.54□□□□□ -0.72
SCNN1A-220ENST00000543585 NTF3P20783 257 aa10.54□□□□□ -0.72
SCNN1A-220ENST00000543585 LAGE3Q14657 143 aa10.54□□□□□ -0.72
SCNN1A-220ENST00000543585 SUMO4Q6EEV6 95 aa10.54□□□□□ -0.72
SCNN1A-220ENST00000543585 NTM-AS1Q6ZSK4 140 aa10.54□□□□□ -0.72
SCNN1A-220ENST00000543585 CNFNQ9BYD5 112 aa10.54□□□□□ -0.72
SCNN1A-220ENST00000543585 EIF5A2Q9GZV4 153 aaKnown RBP10.54□□□□□ -0.72
SCNN1A-220ENST00000543585 NDUFS6O75380 124 aaKnown RBP10.53□□□□□ -0.72
SCNN1A-220ENST00000543585 SMIM17P0DL12 118 aa10.53□□□□□ -0.72
SCNN1A-220ENST00000543585 TRBV6-8A0A0A6YYG3 113 aa10.52□□□□□ -0.73
SCNN1A-220ENST00000543585 C9JQL5 133 aa10.52□□□□□ -0.73
SCNN1A-220ENST00000543585 CDK2AP2O75956 126 aa10.52□□□□□ -0.73
SCNN1A-220ENST00000543585 WFDC2Q14508 124 aa10.52□□□□□ -0.73
SCNN1A-220ENST00000543585 WDR73Q6P4I2 378 aa10.52□□□□□ -0.73
SCNN1A-220ENST00000543585 TEX261Q6UWH6 196 aa10.52□□□□□ -0.73
SCNN1A-220ENST00000543585 FAM231DQ6ZW35 169 aa10.52□□□□□ -0.73
SCNN1A-220ENST00000543585 SMIM7Q9BQ49 75 aa10.52□□□□□ -0.73
SCNN1A-220ENST00000543585 GATCO43716 136 aaKnown RBP10.51□□□□□ -0.73
SCNN1A-220ENST00000543585 LINC01551Q86U37 167 aa10.51□□□□□ -0.73
SCNN1A-220ENST00000543585 MAPKAPK5-AS1Q8N8E1 139 aa10.51□□□□□ -0.73
SCNN1A-220ENST00000543585 KRTAP4-5Q9BYR2 181 aa10.51□□□□□ -0.73
SCNN1A-220ENST00000543585 DPH3P1Q9H4G8 78 aa10.51□□□□□ -0.73
SCNN1A-220ENST00000543585 PGPEP1Q9NXJ5 209 aa10.51□□□□□ -0.73
SCNN1A-220ENST00000543585 EREGO14944 169 aa10.5□□□□□ -0.73
SCNN1A-220ENST00000543585 PSCAO43653 123 aa10.5□□□□□ -0.73
SCNN1A-220ENST00000543585 TRGC1P0CF51 173 aa10.5□□□□□ -0.73
SCNN1A-220ENST00000543585 FOXA3P55318 350 aaPredicted RBP10.5□□□□□ -0.73
SCNN1A-220ENST00000543585 SRSF3P84103 164 aaKnown RBP10.5□□□□□ -0.73
SCNN1A-220ENST00000543585 KLK12Q9UKR0 248 aa10.5□□□□□ -0.73
SCNN1A-220ENST00000543585 ZNF727A8MUV8 499 aa10.49□□□□□ -0.73
SCNN1A-220ENST00000543585 TWIST1Q15672 202 aa10.49□□□□□ -0.73
SCNN1A-220ENST00000543585 KRTAP10-1P60331 282 aa10.48□□□□□ -0.73
SCNN1A-220ENST00000543585 MPV17L2Q567V2 206 aa10.48□□□□□ -0.73
SCNN1A-220ENST00000543585 CDPF1Q6NVV7 123 aa10.48□□□□□ -0.73
SCNN1A-220ENST00000543585 CHCHD7Q9BUK0 85 aa10.48□□□□□ -0.73
SCNN1A-220ENST00000543585 TRAV8-3A0A0A6YYJ7 113 aa10.47□□□□□ -0.73
SCNN1A-220ENST00000543585 TRAV26-2A0A0B4J265 109 aa10.47□□□□□ -0.73
SCNN1A-220ENST00000543585 CT83Q5H943 113 aa10.47□□□□□ -0.73
SCNN1A-220ENST00000543585 RASL11AQ6T310 242 aa10.47□□□□□ -0.73
SCNN1A-220ENST00000543585 GATD1Q8NB37 220 aa10.47□□□□□ -0.73
SCNN1A-220ENST00000543585 PGLYRP4Q96LB8 373 aa10.47□□□□□ -0.73
SCNN1A-220ENST00000543585 URGCP-MRPS24S4R325 110 aa10.47□□□□□ -0.73
SCNN1A-220ENST00000543585 A0A087WX48 190 aa10.46□□□□□ -0.73
SCNN1A-220ENST00000543585 A8MWL6 223 aa10.46□□□□□ -0.73
SCNN1A-220ENST00000543585 Q8N814 137 aa10.46□□□□□ -0.73
SCNN1A-220ENST00000543585 DEFB104AQ8WTQ1 72 aa10.46□□□□□ -0.73
SCNN1A-220ENST00000543585 UBE2WQ96B02 151 aa10.46□□□□□ -0.73
SCNN1A-220ENST00000543585 OSTCQ9NRP0 149 aa10.46□□□□□ -0.73
SCNN1A-220ENST00000543585 FAT1Q14517 4588 aa10.45□□□□□ -0.74
SCNN1A-220ENST00000543585 TMEM262E9PQX1 116 aa10.45□□□□□ -0.74
SCNN1A-220ENST00000543585 H7C1H1 209 aa10.45□□□□□ -0.74
SCNN1A-220ENST00000543585 LECT2O14960 151 aa10.45□□□□□ -0.74
SCNN1A-220ENST00000543585 ATRAIDQ6UW56 229 aa10.45□□□□□ -0.74
SCNN1A-220ENST00000543585 ENHOQ6UWT2 76 aa10.45□□□□□ -0.74
SCNN1A-220ENST00000543585 Q8N976 141 aa10.45□□□□□ -0.74
SCNN1A-220ENST00000543585 CHCHD5Q9BSY4 110 aa10.45□□□□□ -0.74
SCNN1A-220ENST00000543585 TM2D2Q9BX73 214 aa10.45□□□□□ -0.74
SCNN1A-220ENST00000543585 NIT2Q9NQR4 276 aa10.45□□□□□ -0.74
SCNN1A-220ENST00000543585 V9GYV3 84 aa10.45□□□□□ -0.74
SCNN1A-220ENST00000543585 RPL23P62829 140 aaKnown RBP10.44□□□□□ -0.74
SCNN1A-220ENST00000543585 GAGE6Q13070 117 aa10.44□□□□□ -0.74
SCNN1A-220ENST00000543585 IQCJQ1A5X6 159 aa10.44□□□□□ -0.74
SCNN1A-220ENST00000543585 C15orf54Q8N8G6 183 aa10.44□□□□□ -0.74
SCNN1A-220ENST00000543585 ISOC2Q96AB3 205 aa10.44□□□□□ -0.74
SCNN1A-220ENST00000543585 TRBV25-1A0A075B6N4 114 aa10.43□□□□□ -0.74
SCNN1A-220ENST00000543585 IGKV2D-24A0A075B6R9 120 aa10.43□□□□□ -0.74
SCNN1A-220ENST00000543585 XGP55808 180 aa10.43□□□□□ -0.74
SCNN1A-220ENST00000543585 TMEM97Q5BJF2 176 aa10.43□□□□□ -0.74
SCNN1A-220ENST00000543585 TSKUQ8WUA8 353 aa10.43□□□□□ -0.74
SCNN1A-220ENST00000543585 BAALCQ8WXS3 180 aa10.43□□□□□ -0.74
SCNN1A-220ENST00000543585 RPL39LQ96EH5 51 aaKnown RBP10.43□□□□□ -0.74
SCNN1A-220ENST00000543585 IGHV1-24A0A0C4DH33 117 aa10.42□□□□□ -0.74
SCNN1A-220ENST00000543585 HIGD1CA8MV81 97 aa10.42□□□□□ -0.74
SCNN1A-220ENST00000543585 GAS8-AS1O95177 125 aa10.42□□□□□ -0.74
SCNN1A-220ENST00000543585 RBX1P62877 108 aa10.42□□□□□ -0.74
SCNN1A-220ENST00000543585 TMEM241Q24JQ0 296 aa10.42□□□□□ -0.74
SCNN1A-220ENST00000543585 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.42□□□□□ -0.74
SCNN1A-220ENST00000543585 GFRA4Q9GZZ7 299 aa10.42□□□□□ -0.74
SCNN1A-220ENST00000543585 IGLV5-52A0A0A0MRZ9 124 aa10.41□□□□□ -0.74
SCNN1A-220ENST00000543585 ANGP03950 147 aaKnown RBP10.41□□□□□ -0.74
SCNN1A-220ENST00000543585 GCSHP23434 173 aa10.41□□□□□ -0.74
SCNN1A-220ENST00000543585 ELOBQ15370 118 aa10.41□□□□□ -0.74
SCNN1A-220ENST00000543585 FAM74A3Q4VXF1 159 aa10.41□□□□□ -0.74
SCNN1A-220ENST00000543585 NTN5Q8WTR8 489 aaPredicted RBP10.41□□□□□ -0.74
SCNN1A-220ENST00000543585 VPS13BQ7Z7G8 4022 aa10.41□□□□□ -0.74
SCNN1A-220ENST00000543585 PEA15Q15121 130 aa10.4□□□□□ -0.74
SCNN1A-220ENST00000543585 ADIRFQ15847 76 aa10.4□□□□□ -0.74
SCNN1A-220ENST00000543585 KCNIP4Q6PIL6 250 aa10.4□□□□□ -0.74
SCNN1A-220ENST00000543585 RNF185Q96GF1 192 aa10.4□□□□□ -0.74
SCNN1A-220ENST00000543585 PRR34Q9NV39 138 aa10.4□□□□□ -0.74
SCNN1A-220ENST00000543585 NAT8Q9UHE5 227 aa10.4□□□□□ -0.74
SCNN1A-220ENST00000543585 A0A1B0GUT8 65 aa10.39□□□□□ -0.75
SCNN1A-220ENST00000543585 FAM231BA6NCW3 169 aa10.39□□□□□ -0.75
SCNN1A-220ENST00000543585 Q0VG73 95 aa10.39□□□□□ -0.75
SCNN1A-220ENST00000543585 KRTAP26-1Q6PEX3 210 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms