RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 LTBP2Q14767 1821 aa1.72□□□□□ -2.13
LEMD3-204ENST00000542032 RGPD4Q7Z3J3 1758 aa1.72□□□□□ -2.13
LEMD3-204ENST00000542032 DNMBPQ6XZF7 1577 aa1.72□□□□□ -2.13
LEMD3-204ENST00000542032 ZGRF1Q86YA3 2104 aa1.72□□□□□ -2.13
LEMD3-204ENST00000542032 PTPRDP23468 1912 aa1.72□□□□□ -2.13
LEMD3-204ENST00000542032 PRDM15P57071 1507 aaPredicted RBP1.71□□□□□ -2.14
LEMD3-204ENST00000542032 TOPAZ1Q8N9V7 1692 aa1.71□□□□□ -2.14
LEMD3-204ENST00000542032 ADAMTS7Q9UKP4 1686 aa1.71□□□□□ -2.14
LEMD3-204ENST00000542032 ERVK-7P63135 1459 aa1.71□□□□□ -2.14
LEMD3-204ENST00000542032 MAGI2Q86UL8 1455 aa1.71□□□□□ -2.14
LEMD3-204ENST00000542032 TRAV23DV6A0A075B6W5 121 aa1.71□□□□□ -2.14
LEMD3-204ENST00000542032 TRBV7-1A0A0A6YYK4 115 aa1.71□□□□□ -2.14
LEMD3-204ENST00000542032 TEX49A0A1B0GTD5 131 aa1.71□□□□□ -2.14
LEMD3-204ENST00000542032 NDUFC1O43677 76 aa1.71□□□□□ -2.14
LEMD3-204ENST00000542032 ADIRFQ15847 76 aa1.71□□□□□ -2.14
LEMD3-204ENST00000542032 LINC00299Q6ZSB3 139 aa1.71□□□□□ -2.14
LEMD3-204ENST00000542032 KRTAP13-1Q8IUC0 172 aa1.71□□□□□ -2.14
LEMD3-204ENST00000542032 ODF3Q96PU9 254 aa1.71□□□□□ -2.14
LEMD3-204ENST00000542032 LIMD2Q9BT23 127 aa1.71□□□□□ -2.14
LEMD3-204ENST00000542032 NXT2Q9NPJ8 142 aaKnown RBP1.71□□□□□ -2.14
LEMD3-204ENST00000542032 TCHHQ07283 1943 aa1.71□□□□□ -2.14
LEMD3-204ENST00000542032 LAMC3Q9Y6N6 1575 aa1.71□□□□□ -2.14
LEMD3-204ENST00000542032 TANC1Q9C0D5 1861 aa1.71□□□□□ -2.14
LEMD3-204ENST00000542032 COL4A5P29400 1685 aa1.71□□□□□ -2.14
LEMD3-204ENST00000542032 MYO18AQ92614 2054 aaKnown RBP1.7□□□□□ -2.14
LEMD3-204ENST00000542032 TRBV7-3A0A075B6L6 115 aa1.7□□□□□ -2.14
LEMD3-204ENST00000542032 TRGV4A0A0C4DH28 118 aa1.7□□□□□ -2.14
LEMD3-204ENST00000542032 TRBV6-4A0A1B0GX49 114 aa1.7□□□□□ -2.14
LEMD3-204ENST00000542032 IGHV3-30P01768 117 aa1.7□□□□□ -2.14
LEMD3-204ENST00000542032 IGHV3-30-5P0DP03 117 aa1.7□□□□□ -2.14
LEMD3-204ENST00000542032 MON2Q7Z3U7 1717 aa1.7□□□□□ -2.14
LEMD3-204ENST00000542032 TVP23CQ96ET8 276 aa1.7□□□□□ -2.14
LEMD3-204ENST00000542032 REG4Q9BYZ8 158 aa1.7□□□□□ -2.14
LEMD3-204ENST00000542032 ST20Q9HBF5 79 aa1.7□□□□□ -2.14
LEMD3-204ENST00000542032 SMCO4Q9NRQ5 59 aa1.7□□□□□ -2.14
LEMD3-204ENST00000542032 PCDH15Q96QU1 1955 aa1.7□□□□□ -2.14
LEMD3-204ENST00000542032 PPLO60437 1756 aa1.7□□□□□ -2.14
LEMD3-204ENST00000542032 CHD1O14646 1710 aa1.69□□□□□ -2.14
LEMD3-204ENST00000542032 NWD2Q9ULI1 1742 aa1.69□□□□□ -2.14
LEMD3-204ENST00000542032 SHROOM3Q8TF72 1996 aa1.69□□□□□ -2.14
LEMD3-204ENST00000542032 IGKV3-7A0A075B6H7 116 aa1.69□□□□□ -2.14
LEMD3-204ENST00000542032 SYS1-DBNDD2H3BUS1 97 aa1.69□□□□□ -2.14
LEMD3-204ENST00000542032 PPYP01298 95 aa1.69□□□□□ -2.14
LEMD3-204ENST00000542032 UBE2D1P51668 147 aa1.69□□□□□ -2.14
LEMD3-204ENST00000542032 DEFA5Q01523 94 aa1.69□□□□□ -2.14
LEMD3-204ENST00000542032 C10orf55Q5SWW7 151 aa1.69□□□□□ -2.14
LEMD3-204ENST00000542032 CYP2G1PQ6ZSU1 146 aa1.69□□□□□ -2.14
LEMD3-204ENST00000542032 TTTY12Q9BZ98 90 aa1.69□□□□□ -2.14
LEMD3-204ENST00000542032 KLK9Q9UKQ9 250 aa1.69□□□□□ -2.14
LEMD3-204ENST00000542032 SPCS1Q9Y6A9 102 aa1.69□□□□□ -2.14
LEMD3-204ENST00000542032 RGPD3A6NKT7 1758 aaPredicted RBP1.69□□□□□ -2.14
LEMD3-204ENST00000542032 KDM6BO15054 1643 aa1.69□□□□□ -2.14
LEMD3-204ENST00000542032 SIP14410 1827 aa1.68□□□□□ -2.14
LEMD3-204ENST00000542032 DOCK2Q92608 1830 aa1.68□□□□□ -2.14
LEMD3-204ENST00000542032 DISP1Q96F81 1524 aa1.68□□□□□ -2.14
LEMD3-204ENST00000542032 A0A0G2JND7 137 aa1.68□□□□□ -2.14
LEMD3-204ENST00000542032 JMJD7-PLA2G4BH0Y9G9 81 aa1.68□□□□□ -2.14
LEMD3-204ENST00000542032 CHKB-CPT1BH3BT56 60 aa1.68□□□□□ -2.14
LEMD3-204ENST00000542032 ETDBQ3ZM63 59 aa1.68□□□□□ -2.14
LEMD3-204ENST00000542032 NMSQ5H8A3 153 aa1.68□□□□□ -2.14
LEMD3-204ENST00000542032 FAM167A-AS1Q96KT0 104 aa1.68□□□□□ -2.14
LEMD3-204ENST00000542032 CYSTM1Q9H1C7 97 aa1.68□□□□□ -2.14
LEMD3-204ENST00000542032 WFDC10AQ9H1F0 79 aa1.68□□□□□ -2.14
LEMD3-204ENST00000542032 PRO1854Q9UHT4 67 aa1.68□□□□□ -2.14
LEMD3-204ENST00000542032 ZFHX2Q9C0A1 2572 aaPredicted RBP1.68□□□□□ -2.14
LEMD3-204ENST00000542032 CCDC141Q6ZP82 1450 aa1.68□□□□□ -2.14
LEMD3-204ENST00000542032 PSME4Q14997 1843 aa1.68□□□□□ -2.14
LEMD3-204ENST00000542032 TET3O43151 1660 aa1.67□□□□□ -2.14
LEMD3-204ENST00000542032 ESPL1Q14674 2120 aa1.67□□□□□ -2.14
LEMD3-204ENST00000542032 EDC4Q6P2E9 1401 aaKnown RBP1.67□□□□□ -2.14
LEMD3-204ENST00000542032 ARHGEF12Q9NZN5 1544 aa1.67□□□□□ -2.14
LEMD3-204ENST00000542032 BAZ2BQ9UIF8 2168 aaKnown RBP1.67□□□□□ -2.14
LEMD3-204ENST00000542032 COL4A2P08572 1712 aa1.67□□□□□ -2.14
LEMD3-204ENST00000542032 SUPT6HQ7KZ85 1726 aaKnown RBP1.67□□□□□ -2.14
LEMD3-204ENST00000542032 TRAV22A0A0B4J277 110 aa1.67□□□□□ -2.14
LEMD3-204ENST00000542032 A0A1W2PPM0 123 aa1.67□□□□□ -2.14
LEMD3-204ENST00000542032 HIGD1CA8MV81 97 aa1.67□□□□□ -2.14
LEMD3-204ENST00000542032 PDCD5O14737 125 aa1.67□□□□□ -2.14
LEMD3-204ENST00000542032 IGLV3-1P01715 115 aa1.67□□□□□ -2.14
LEMD3-204ENST00000542032 RNASE3P12724 160 aaKnown RBP1.67□□□□□ -2.14
LEMD3-204ENST00000542032 PDE6GP18545 87 aa1.67□□□□□ -2.14
LEMD3-204ENST00000542032 EDDM3BP56851 147 aa1.67□□□□□ -2.14
LEMD3-204ENST00000542032 UBE2D3P61077 147 aa1.67□□□□□ -2.14
LEMD3-204ENST00000542032 UBE2D2P62837 147 aa1.67□□□□□ -2.14
LEMD3-204ENST00000542032 WFDC2Q14508 124 aa1.67□□□□□ -2.14
LEMD3-204ENST00000542032 SFTA2Q6UW10 78 aa1.67□□□□□ -2.14
LEMD3-204ENST00000542032 Q8N6K4 173 aa1.67□□□□□ -2.14
LEMD3-204ENST00000542032 AMELYQ99218 206 aa1.67□□□□□ -2.14
LEMD3-204ENST00000542032 TXNDC17Q9BRA2 123 aa1.67□□□□□ -2.14
LEMD3-204ENST00000542032 TMEM14CQ9P0S9 112 aa1.67□□□□□ -2.14
LEMD3-204ENST00000542032 HIGD1BQ9P298 99 aa1.67□□□□□ -2.14
LEMD3-204ENST00000542032 KIF20BQ96Q89 1820 aa1.67□□□□□ -2.14
LEMD3-204ENST00000542032 UNC13CQ8NB66 2214 aa1.67□□□□□ -2.14
LEMD3-204ENST00000542032 EPRSP07814 1512 aaKnown RBP1.66□□□□□ -2.14
LEMD3-204ENST00000542032 SHROOM2Q13796 1616 aa1.66□□□□□ -2.14
LEMD3-204ENST00000542032 H7BZZ5 65 aa1.66□□□□□ -2.14
LEMD3-204ENST00000542032 DNAL4O96015 105 aa1.66□□□□□ -2.14
LEMD3-204ENST00000542032 KRTAP12-4P60329 112 aa1.66□□□□□ -2.14
LEMD3-204ENST00000542032 SSBP1Q04837 148 aaKnown RBP1.66□□□□□ -2.14
LEMD3-204ENST00000542032 ZNF56Q15929 161 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms