RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 AP1S3Q96PC3 154 aa7.2□□□□□ -1.26
HMGA2-209ENST00000539662 BIN3Q9NQY0 253 aa7.2□□□□□ -1.26
HMGA2-209ENST00000539662 PGPEP1Q9NXJ5 209 aa7.2□□□□□ -1.26
HMGA2-209ENST00000539662 TRBV7-3A0A075B6L6 115 aa7.19□□□□□ -1.26
HMGA2-209ENST00000539662 TRBV10-1A0A0K0K1A3 114 aa7.19□□□□□ -1.26
HMGA2-209ENST00000539662 F2Z2F3 143 aa7.19□□□□□ -1.26
HMGA2-209ENST00000539662 M0QY20 66 aa7.19□□□□□ -1.26
HMGA2-209ENST00000539662 ERVFC1-1P60608 527 aa7.19□□□□□ -1.26
HMGA2-209ENST00000539662 RPL23P62829 140 aaKnown RBP7.19□□□□□ -1.26
HMGA2-209ENST00000539662 CACNG7P62955 275 aa7.19□□□□□ -1.26
HMGA2-209ENST00000539662 NTM-AS1Q6ZSK4 140 aa7.19□□□□□ -1.26
HMGA2-209ENST00000539662 DAZ4Q86SG3 579 aaKnown RBP7.19□□□□□ -1.26
HMGA2-209ENST00000539662 PGLYRP4Q96LB8 373 aa7.19□□□□□ -1.26
HMGA2-209ENST00000539662 CNFNQ9BYD5 112 aa7.19□□□□□ -1.26
HMGA2-209ENST00000539662 DAZ3Q9NR90 486 aaKnown RBP7.19□□□□□ -1.26
HMGA2-209ENST00000539662 XKRY2A2RUG3 117 aa7.18□□□□□ -1.26
HMGA2-209ENST00000539662 IBA57-AS1B1ANH7 110 aa7.18□□□□□ -1.26
HMGA2-209ENST00000539662 NDUFS6O75380 124 aaKnown RBP7.18□□□□□ -1.26
HMGA2-209ENST00000539662 SMIM17P0DL12 118 aa7.18□□□□□ -1.26
HMGA2-209ENST00000539662 RPL36AP83881 106 aaKnown RBP7.18□□□□□ -1.26
HMGA2-209ENST00000539662 TWIST1Q15672 202 aa7.18□□□□□ -1.26
HMGA2-209ENST00000539662 SPATA12Q7Z6I5 190 aa7.18□□□□□ -1.26
HMGA2-209ENST00000539662 RPL36ALQ969Q0 106 aaKnown RBP7.18□□□□□ -1.26
HMGA2-209ENST00000539662 Q9HAA7 133 aa7.18□□□□□ -1.26
HMGA2-209ENST00000539662 APOBP04114 4563 aaKnown RBP7.17□□□□□ -1.26
HMGA2-209ENST00000539662 TRAV9-2A0A087WT02 112 aa7.17□□□□□ -1.26
HMGA2-209ENST00000539662 TRAV26-2A0A0B4J265 109 aa7.17□□□□□ -1.26
HMGA2-209ENST00000539662 GAS8-AS1O95177 125 aa7.17□□□□□ -1.26
HMGA2-209ENST00000539662 IFITM2Q01629 132 aa7.17□□□□□ -1.26
HMGA2-209ENST00000539662 NIT1Q86X76 327 aa7.17□□□□□ -1.26
HMGA2-209ENST00000539662 ISOC2Q96AB3 205 aa7.17□□□□□ -1.26
HMGA2-209ENST00000539662 KRTAP17-1Q9BYP8 105 aa7.17□□□□□ -1.26
HMGA2-209ENST00000539662 V9GYV3 84 aa7.17□□□□□ -1.26
HMGA2-209ENST00000539662 RYR1P21817 5038 aa7.17□□□□□ -1.26
HMGA2-209ENST00000539662 BTF3P20290 206 aaKnown RBP7.16□□□□□ -1.26
HMGA2-209ENST00000539662 PEA15Q15121 130 aa7.16□□□□□ -1.26
HMGA2-209ENST00000539662 TMEM241Q24JQ0 296 aa7.16□□□□□ -1.26
HMGA2-209ENST00000539662 WDR73Q6P4I2 378 aa7.16□□□□□ -1.26
HMGA2-209ENST00000539662 DPH3P1Q9H4G8 78 aa7.16□□□□□ -1.26
HMGA2-209ENST00000539662 OSTCQ9NRP0 149 aa7.16□□□□□ -1.26
HMGA2-209ENST00000539662 A0A087WTM6 91 aa7.15□□□□□ -1.26
HMGA2-209ENST00000539662 TRBV6-8A0A0A6YYG3 113 aa7.15□□□□□ -1.26
HMGA2-209ENST00000539662 A8MWL6 223 aa7.15□□□□□ -1.26
HMGA2-209ENST00000539662 TRGC1P0CF51 173 aa7.15□□□□□ -1.26
HMGA2-209ENST00000539662 WFDC2Q14508 124 aa7.15□□□□□ -1.26
HMGA2-209ENST00000539662 ADIRFQ15847 76 aa7.15□□□□□ -1.26
HMGA2-209ENST00000539662 CT83Q5H943 113 aa7.15□□□□□ -1.26
HMGA2-209ENST00000539662 GATD1Q8NB37 220 aa7.15□□□□□ -1.26
HMGA2-209ENST00000539662 CLRN3Q8NCR9 226 aa7.15□□□□□ -1.26
HMGA2-209ENST00000539662 TSKUQ8WUA8 353 aa7.15□□□□□ -1.26
HMGA2-209ENST00000539662 RPL39LQ96EH5 51 aaKnown RBP7.15□□□□□ -1.26
HMGA2-209ENST00000539662 NAT8Q9UHE5 227 aa7.15□□□□□ -1.26
HMGA2-209ENST00000539662 HSPG2P98160 4391 aa7.15□□□□□ -1.27
HMGA2-209ENST00000539662 A0A087WWC5 75 aa7.14□□□□□ -1.27
HMGA2-209ENST00000539662 HIGD1CA8MV81 97 aa7.14□□□□□ -1.27
HMGA2-209ENST00000539662 C16orf90A8MZG2 172 aa7.14□□□□□ -1.27
HMGA2-209ENST00000539662 RASL11AQ6T310 242 aa7.14□□□□□ -1.27
HMGA2-209ENST00000539662 C10orf126Q8N4M7 172 aa7.14□□□□□ -1.27
HMGA2-209ENST00000539662 MAPKAPK5-AS1Q8N8E1 139 aa7.14□□□□□ -1.27
HMGA2-209ENST00000539662 KLK12Q9UKR0 248 aa7.14□□□□□ -1.27
HMGA2-209ENST00000539662 LRCOL1A6NCL2 159 aa7.13□□□□□ -1.27
HMGA2-209ENST00000539662 K7EP13 123 aa7.13□□□□□ -1.27
HMGA2-209ENST00000539662 FAM74A3Q4VXF1 159 aa7.13□□□□□ -1.27
HMGA2-209ENST00000539662 MPV17L2Q567V2 206 aa7.13□□□□□ -1.27
HMGA2-209ENST00000539662 NFE4Q86UQ8 179 aa7.13□□□□□ -1.27
HMGA2-209ENST00000539662 Q8N976 141 aa7.13□□□□□ -1.27
HMGA2-209ENST00000539662 NUP35Q8NFH5 326 aa7.13□□□□□ -1.27
HMGA2-209ENST00000539662 GAGE6Q13070 117 aa7.12□□□□□ -1.27
HMGA2-209ENST00000539662 RNF185Q96GF1 192 aa7.12□□□□□ -1.27
HMGA2-209ENST00000539662 CHCHD5Q9BSY4 110 aa7.12□□□□□ -1.27
HMGA2-209ENST00000539662 SMDT1Q9H4I9 107 aa7.12□□□□□ -1.27
HMGA2-209ENST00000539662 NIT2Q9NQR4 276 aa7.12□□□□□ -1.27
HMGA2-209ENST00000539662 A0A1B0GUT8 65 aa7.11□□□□□ -1.27
HMGA2-209ENST00000539662 TMEM262E9PQX1 116 aa7.11□□□□□ -1.27
HMGA2-209ENST00000539662 LECT2O14960 151 aa7.11□□□□□ -1.27
HMGA2-209ENST00000539662 RPS10P46783 165 aaKnown RBP7.11□□□□□ -1.27
HMGA2-209ENST00000539662 CLLU1Q5K131 121 aa7.11□□□□□ -1.27
HMGA2-209ENST00000539662 ATRAIDQ6UW56 229 aa7.11□□□□□ -1.27
HMGA2-209ENST00000539662 ENHOQ6UWT2 76 aa7.11□□□□□ -1.27
HMGA2-209ENST00000539662 C15orf54Q8N8G6 183 aa7.11□□□□□ -1.27
HMGA2-209ENST00000539662 GFRA4Q9GZZ7 299 aa7.11□□□□□ -1.27
HMGA2-209ENST00000539662 A0A087WX48 190 aa7.1□□□□□ -1.27
HMGA2-209ENST00000539662 SMIM27A0A1W2PRY6 76 aa7.1□□□□□ -1.27
HMGA2-209ENST00000539662 SMKR1H3BMG3 65 aa7.1□□□□□ -1.27
HMGA2-209ENST00000539662 H7C1H1 209 aa7.1□□□□□ -1.27
HMGA2-209ENST00000539662 RAB4AP20338 218 aa7.1□□□□□ -1.27
HMGA2-209ENST00000539662 LAGE3Q14657 143 aa7.1□□□□□ -1.27
HMGA2-209ENST00000539662 IQCJQ1A5X6 159 aa7.1□□□□□ -1.27
HMGA2-209ENST00000539662 AMN1Q8IY45 258 aa7.1□□□□□ -1.27
HMGA2-209ENST00000539662 UBE2WQ96B02 151 aa7.1□□□□□ -1.27
HMGA2-209ENST00000539662 DNAH8Q96JB1 4490 aa7.09□□□□□ -1.27
HMGA2-209ENST00000539662 FAM231BA6NCW3 169 aa7.09□□□□□ -1.27
HMGA2-209ENST00000539662 PSCAO43653 123 aa7.09□□□□□ -1.27
HMGA2-209ENST00000539662 NCR2O95944 276 aa7.09□□□□□ -1.27
HMGA2-209ENST00000539662 RAB14P61106 215 aa7.09□□□□□ -1.27
HMGA2-209ENST00000539662 RBX1P62877 108 aa7.09□□□□□ -1.27
HMGA2-209ENST00000539662 CLPSL2Q6UWE3 100 aa7.09□□□□□ -1.27
HMGA2-209ENST00000539662 BAALCQ8WXS3 180 aa7.09□□□□□ -1.27
HMGA2-209ENST00000539662 TMEM191AQ9H0A3 160 aa7.09□□□□□ -1.27
HMGA2-209ENST00000539662 URGCP-MRPS24S4R325 110 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms