RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 F2Z2F3 143 aa8.42□□□□□ -1.06
USF1-211ENST00000534633 PSCAO43653 123 aa8.42□□□□□ -1.06
USF1-211ENST00000534633 NTF3P20783 257 aa8.42□□□□□ -1.06
USF1-211ENST00000534633 CTRLP40313 264 aa8.42□□□□□ -1.06
USF1-211ENST00000534633 FAM74A4Q5TZK3 123 aa8.42□□□□□ -1.06
USF1-211ENST00000534633 NTN5Q8WTR8 489 aaPredicted RBP8.42□□□□□ -1.06
USF1-211ENST00000534633 TMEM70Q9BUB7 260 aa8.42□□□□□ -1.06
USF1-211ENST00000534633 CNFNQ9BYD5 112 aa8.42□□□□□ -1.06
USF1-211ENST00000534633 SRRM2Q9UQ35 2752 aaKnown RBP8.42□□□□□ -1.06
USF1-211ENST00000534633 IGLV5-52A0A0A0MRZ9 124 aa8.41□□□□□ -1.06
USF1-211ENST00000534633 LRCOL1A6NCL2 159 aa8.41□□□□□ -1.06
USF1-211ENST00000534633 FAM229AH3BQW9 127 aa8.41□□□□□ -1.06
USF1-211ENST00000534633 SMR3BP02814 79 aaPredicted RBP8.41□□□□□ -1.06
USF1-211ENST00000534633 CT83Q5H943 113 aa8.41□□□□□ -1.06
USF1-211ENST00000534633 LINC01556Q5JQF7 62 aa8.41□□□□□ -1.06
USF1-211ENST00000534633 WDR73Q6P4I2 378 aa8.41□□□□□ -1.06
USF1-211ENST00000534633 A8MWL6 223 aa8.4□□□□□ -1.06
USF1-211ENST00000534633 IBA57-AS1B1ANH7 110 aa8.4□□□□□ -1.06
USF1-211ENST00000534633 RHODO00212 210 aa8.4□□□□□ -1.06
USF1-211ENST00000534633 LINC00694P0DN24 101 aa8.4□□□□□ -1.06
USF1-211ENST00000534633 CACNG7P62955 275 aa8.4□□□□□ -1.06
USF1-211ENST00000534633 RHOHQ15669 191 aa8.4□□□□□ -1.06
USF1-211ENST00000534633 ADIRFQ15847 76 aa8.4□□□□□ -1.06
USF1-211ENST00000534633 TSKUQ8WUA8 353 aa8.4□□□□□ -1.06
USF1-211ENST00000534633 FAT1Q14517 4588 aa8.4□□□□□ -1.07
USF1-211ENST00000534633 TRAV8-6A0A0B4J262 113 aa8.39□□□□□ -1.07
USF1-211ENST00000534633 ADCYAP1P18509 176 aa8.39□□□□□ -1.07
USF1-211ENST00000534633 PGLYRP4Q96LB8 373 aa8.39□□□□□ -1.07
USF1-211ENST00000534633 PRADC1Q9BSG0 188 aa8.39□□□□□ -1.07
USF1-211ENST00000534633 MYCBP2O75592 4640 aa8.39□□□□□ -1.07
USF1-211ENST00000534633 TMEM218A2RU14 115 aa8.38□□□□□ -1.07
USF1-211ENST00000534633 LINC00862A6NCI5 91 aa8.38□□□□□ -1.07
USF1-211ENST00000534633 RAB4BP61018 213 aa8.38□□□□□ -1.07
USF1-211ENST00000534633 Q8N814 137 aa8.38□□□□□ -1.07
USF1-211ENST00000534633 OR10G8Q8NGN5 311 aa8.38□□□□□ -1.07
USF1-211ENST00000534633 GFRA4Q9GZZ7 299 aa8.38□□□□□ -1.07
USF1-211ENST00000534633 FAM231BA6NCW3 169 aa8.37□□□□□ -1.07
USF1-211ENST00000534633 GAGE12JA6NER3 117 aa8.37□□□□□ -1.07
USF1-211ENST00000534633 HIGD1CA8MV81 97 aa8.37□□□□□ -1.07
USF1-211ENST00000534633 HAMPP81172 84 aa8.37□□□□□ -1.07
USF1-211ENST00000534633 GAGE1Q13065 139 aa8.37□□□□□ -1.07
USF1-211ENST00000534633 GAGE4Q13068 117 aa8.37□□□□□ -1.07
USF1-211ENST00000534633 GAGE5Q13069 117 aa8.37□□□□□ -1.07
USF1-211ENST00000534633 TWIST1Q15672 202 aa8.37□□□□□ -1.07
USF1-211ENST00000534633 GAGE13Q4V321 117 aa8.37□□□□□ -1.07
USF1-211ENST00000534633 OR10J3Q5JRS4 329 aa8.37□□□□□ -1.07
USF1-211ENST00000534633 UQCC3Q6UW78 93 aa8.37□□□□□ -1.07
USF1-211ENST00000534633 C15orf54Q8N8G6 183 aa8.37□□□□□ -1.07
USF1-211ENST00000534633 NUP35Q8NFH5 326 aa8.37□□□□□ -1.07
USF1-211ENST00000534633 AP1S3Q96PC3 154 aa8.37□□□□□ -1.07
USF1-211ENST00000534633 Q9HAA7 133 aa8.37□□□□□ -1.07
USF1-211ENST00000534633 M0QY20 66 aa8.36□□□□□ -1.07
USF1-211ENST00000534633 LAGE3Q14657 143 aa8.36□□□□□ -1.07
USF1-211ENST00000534633 LELP1Q5T871 98 aa8.36□□□□□ -1.07
USF1-211ENST00000534633 COMMD7Q86VX2 200 aa8.36□□□□□ -1.07
USF1-211ENST00000534633 TRBV10-1A0A0K0K1A3 114 aa8.35□□□□□ -1.07
USF1-211ENST00000534633 SMIM27A0A1W2PRY6 76 aa8.35□□□□□ -1.07
USF1-211ENST00000534633 ZNF56Q15929 161 aa8.35□□□□□ -1.07
USF1-211ENST00000534633 NEXN-AS1Q8NBZ9 246 aa8.35□□□□□ -1.07
USF1-211ENST00000534633 ATP6V0E2Q8NHE4 81 aa8.35□□□□□ -1.07
USF1-211ENST00000534633 A0A1B0GUT8 65 aa8.34□□□□□ -1.07
USF1-211ENST00000534633 F5H697 171 aa8.34□□□□□ -1.07
USF1-211ENST00000534633 IGHV3-30P01768 117 aa8.34□□□□□ -1.07
USF1-211ENST00000534633 IGHV3-33P01772 117 aa8.34□□□□□ -1.07
USF1-211ENST00000534633 TRGC1P0CF51 173 aa8.34□□□□□ -1.07
USF1-211ENST00000534633 SMIM17P0DL12 118 aa8.34□□□□□ -1.07
USF1-211ENST00000534633 IGHV3-30-3P0DP02 117 aa8.34□□□□□ -1.07
USF1-211ENST00000534633 IGHV3-30-5P0DP03 117 aa8.34□□□□□ -1.07
USF1-211ENST00000534633 UBE2D3P61077 147 aa8.34□□□□□ -1.07
USF1-211ENST00000534633 UBE2D2P62837 147 aa8.34□□□□□ -1.07
USF1-211ENST00000534633 SUMO4Q6EEV6 95 aa8.34□□□□□ -1.07
USF1-211ENST00000534633 TM2D2Q9BX73 214 aa8.34□□□□□ -1.07
USF1-211ENST00000534633 GTSF1LQ9H1H1 148 aa8.34□□□□□ -1.07
USF1-211ENST00000534633 DPH3P1Q9H4G8 78 aa8.34□□□□□ -1.07
USF1-211ENST00000534633 FAM30AQ9NZY2 134 aa8.34□□□□□ -1.07
USF1-211ENST00000534633 TRBV7-3A0A075B6L6 115 aa8.33□□□□□ -1.08
USF1-211ENST00000534633 NAT8BQ9UHF3 227 aa8.33□□□□□ -1.08
USF1-211ENST00000534633 TRAV26-2A0A0B4J265 109 aa8.32□□□□□ -1.08
USF1-211ENST00000534633 F8W036 122 aa8.32□□□□□ -1.08
USF1-211ENST00000534633 GAS8-AS1O95177 125 aa8.32□□□□□ -1.08
USF1-211ENST00000534633 MGPP08493 103 aa8.32□□□□□ -1.08
USF1-211ENST00000534633 PNRC1Q12796 327 aaPredicted RBP8.32□□□□□ -1.08
USF1-211ENST00000534633 C10orf91Q5T1B1 145 aa8.32□□□□□ -1.08
USF1-211ENST00000534633 GATD1Q8NB37 220 aa8.32□□□□□ -1.08
USF1-211ENST00000534633 RNF185Q96GF1 192 aa8.32□□□□□ -1.08
USF1-211ENST00000534633 SEC11CQ9BY50 192 aa8.32□□□□□ -1.08
USF1-211ENST00000534633 TRAV8-3A0A0A6YYJ7 113 aa8.31□□□□□ -1.08
USF1-211ENST00000534633 PLA2G1BP04054 148 aaKnown RBP8.31□□□□□ -1.08
USF1-211ENST00000534633 RPL36AP83881 106 aaKnown RBP8.31□□□□□ -1.08
USF1-211ENST00000534633 Q6ZSA8 131 aa8.31□□□□□ -1.08
USF1-211ENST00000534633 RPL36ALQ969Q0 106 aaKnown RBP8.31□□□□□ -1.08
USF1-211ENST00000534633 TMEM191AQ9H0A3 160 aa8.31□□□□□ -1.08
USF1-211ENST00000534633 J3QL48 77 aa8.3□□□□□ -1.08
USF1-211ENST00000534633 NTM-AS1Q6ZSK4 140 aa8.3□□□□□ -1.08
USF1-211ENST00000534633 Q8N3U1 123 aa8.3□□□□□ -1.08
USF1-211ENST00000534633 MT-ND4LP03901 98 aa8.29□□□□□ -1.08
USF1-211ENST00000534633 RAB4AP20338 218 aa8.29□□□□□ -1.08
USF1-211ENST00000534633 RIGQ13278 110 aa8.29□□□□□ -1.08
USF1-211ENST00000534633 WFDC2Q14508 124 aa8.29□□□□□ -1.08
USF1-211ENST00000534633 RASL11AQ6T310 242 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms