RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 MGST2Q99735 147 aa1.87□□□□□ -2.11
AC055878.1-201ENST00000531858 BAZ1AQ9NRL2 1556 aaPredicted RBP1.87□□□□□ -2.11
AC055878.1-201ENST00000531858 LINC00474Q9P2X8 69 aa1.87□□□□□ -2.11
AC055878.1-201ENST00000531858 LENEPQ9Y5L5 61 aa1.87□□□□□ -2.11
AC055878.1-201ENST00000531858 LRRC37A3O60309 1634 aa1.87□□□□□ -2.11
AC055878.1-201ENST00000531858 SIP14410 1827 aa1.87□□□□□ -2.11
AC055878.1-201ENST00000531858 ROBO1Q9Y6N7 1651 aa1.86□□□□□ -2.11
AC055878.1-201ENST00000531858 RP1P56715 2156 aa1.86□□□□□ -2.11
AC055878.1-201ENST00000531858 IGKV2-29A2NJV5 120 aaPredicted RBP1.86□□□□□ -2.11
AC055878.1-201ENST00000531858 CLPSL1A2RUU4 121 aa1.86□□□□□ -2.11
AC055878.1-201ENST00000531858 C10orf99Q6UWK7 81 aa1.86□□□□□ -2.11
AC055878.1-201ENST00000531858 Q6ZQY7 126 aa1.86□□□□□ -2.11
AC055878.1-201ENST00000531858 Q86TA4 180 aa1.86□□□□□ -2.11
AC055878.1-201ENST00000531858 DEFB119Q8N690 84 aa1.86□□□□□ -2.11
AC055878.1-201ENST00000531858 FN1P02751 2386 aaKnown RBP1.86□□□□□ -2.11
AC055878.1-201ENST00000531858 ICE1Q9Y2F5 2266 aa1.86□□□□□ -2.11
AC055878.1-201ENST00000531858 MCM3APO60318 1980 aa1.85□□□□□ -2.11
AC055878.1-201ENST00000531858 RTTNQ86VV8 2226 aa1.85□□□□□ -2.11
AC055878.1-201ENST00000531858 TRBV7-7A0A0K0K1E9 115 aa1.85□□□□□ -2.11
AC055878.1-201ENST00000531858 LOC285095A0A1B0GVY8 99 aa1.85□□□□□ -2.11
AC055878.1-201ENST00000531858 CAV3P56539 151 aa1.85□□□□□ -2.11
AC055878.1-201ENST00000531858 KRTAP6-3Q3LI67 103 aa1.85□□□□□ -2.11
AC055878.1-201ENST00000531858 LCN9Q8WX39 176 aa1.85□□□□□ -2.11
AC055878.1-201ENST00000531858 FAIMQ9NVQ4 179 aa1.85□□□□□ -2.11
AC055878.1-201ENST00000531858 CCDC18Q5T9S5 1454 aa1.85□□□□□ -2.11
AC055878.1-201ENST00000531858 TNS1Q9HBL0 1735 aaKnown RBP1.85□□□□□ -2.11
AC055878.1-201ENST00000531858 ANKRD36BQ8N2N9 1353 aa1.85□□□□□ -2.11
AC055878.1-201ENST00000531858 SHROOM2Q13796 1616 aa1.84□□□□□ -2.11
AC055878.1-201ENST00000531858 ANKRD26Q9UPS8 1709 aa1.84□□□□□ -2.11
AC055878.1-201ENST00000531858 hADV29S1A0JD25 119 aa1.84□□□□□ -2.11
AC055878.1-201ENST00000531858 LINC00575Q6W349 94 aa1.84□□□□□ -2.11
AC055878.1-201ENST00000531858 TSLPQ969D9 159 aa1.84□□□□□ -2.11
AC055878.1-201ENST00000531858 PMCHL2Q9BQD1 86 aa1.84□□□□□ -2.11
AC055878.1-201ENST00000531858 LCE3DQ9BYE3 92 aa1.84□□□□□ -2.11
AC055878.1-201ENST00000531858 EML5Q05BV3 1969 aa1.84□□□□□ -2.11
AC055878.1-201ENST00000531858 ALPK2Q86TB3 2170 aa1.83□□□□□ -2.12
AC055878.1-201ENST00000531858 MUC22E2RYF6 1773 aaPredicted RBP1.83□□□□□ -2.12
AC055878.1-201ENST00000531858 AKAP12Q02952 1782 aa1.83□□□□□ -2.12
AC055878.1-201ENST00000531858 ABCC3O15438 1527 aa1.83□□□□□ -2.12
AC055878.1-201ENST00000531858 SFT2D2O95562 160 aa1.83□□□□□ -2.12
AC055878.1-201ENST00000531858 EDDM3BP56851 147 aa1.83□□□□□ -2.12
AC055878.1-201ENST00000531858 UBE2D3P61077 147 aa1.83□□□□□ -2.12
AC055878.1-201ENST00000531858 UBE2D2P62837 147 aa1.83□□□□□ -2.12
AC055878.1-201ENST00000531858 SEC11AP67812 179 aa1.83□□□□□ -2.12
AC055878.1-201ENST00000531858 DYNLRB1Q9NP97 96 aa1.83□□□□□ -2.12
AC055878.1-201ENST00000531858 UQCR10Q9UDW1 63 aa1.83□□□□□ -2.12
AC055878.1-201ENST00000531858 V9GYV3 84 aa1.83□□□□□ -2.12
AC055878.1-201ENST00000531858 CC2D2AQ9P2K1 1620 aa1.83□□□□□ -2.12
AC055878.1-201ENST00000531858 PTPRFP10586 1907 aa1.83□□□□□ -2.12
AC055878.1-201ENST00000531858 CEP192Q8TEP8 1941 aa1.83□□□□□ -2.12
AC055878.1-201ENST00000531858 CR1P17927 2039 aa1.83□□□□□ -2.12
AC055878.1-201ENST00000531858 GOLGA3Q08378 1498 aa1.82□□□□□ -2.12
AC055878.1-201ENST00000531858 CRYM-AS1A6NIL9 109 aa1.82□□□□□ -2.12
AC055878.1-201ENST00000531858 COX6CP09669 75 aa1.82□□□□□ -2.12
AC055878.1-201ENST00000531858 KRTAP12-1P59990 96 aa1.82□□□□□ -2.12
AC055878.1-201ENST00000531858 PYY3Q5JQD4 70 aa1.82□□□□□ -2.12
AC055878.1-201ENST00000531858 AMELXQ99217 191 aa1.82□□□□□ -2.12
AC055878.1-201ENST00000531858 TRGV9Q99603 122 aa1.82□□□□□ -2.12
AC055878.1-201ENST00000531858 PRO1854Q9UHT4 67 aa1.82□□□□□ -2.12
AC055878.1-201ENST00000531858 MED12LQ86YW9 2145 aa1.82□□□□□ -2.12
AC055878.1-201ENST00000531858 CACNA1GO43497 2377 aa1.81□□□□□ -2.12
AC055878.1-201ENST00000531858 TOPAZ1Q8N9V7 1692 aa1.81□□□□□ -2.12
AC055878.1-201ENST00000531858 DLEC1Q9Y238 1755 aa1.81□□□□□ -2.12
AC055878.1-201ENST00000531858 SERP2Q8N6R1 65 aa1.81□□□□□ -2.12
AC055878.1-201ENST00000531858 LINC00208Q96KT6 92 aa1.81□□□□□ -2.12
AC055878.1-201ENST00000531858 CCL19Q99731 98 aa1.81□□□□□ -2.12
AC055878.1-201ENST00000531858 NPVFQ9HCQ7 196 aa1.81□□□□□ -2.12
AC055878.1-201ENST00000531858 TMEM14BQ9NUH8 114 aa1.81□□□□□ -2.12
AC055878.1-201ENST00000531858 ARAP2Q8WZ64 1704 aa1.8□□□□□ -2.12
AC055878.1-201ENST00000531858 NWD2Q9ULI1 1742 aa1.8□□□□□ -2.12
AC055878.1-201ENST00000531858 FAM213BQ8TBF2 198 aa1.8□□□□□ -2.12
AC055878.1-201ENST00000531858 CDC42SE2Q9NRR3 84 aa1.8□□□□□ -2.12
AC055878.1-201ENST00000531858 NDUFA4L2Q9NRX3 87 aa1.8□□□□□ -2.12
AC055878.1-201ENST00000531858 CACFD1Q9UGQ2 172 aa1.8□□□□□ -2.12
AC055878.1-201ENST00000531858 R4GMQ9 66 aa1.8□□□□□ -2.12
AC055878.1-201ENST00000531858 BAZ2BQ9UIF8 2168 aaKnown RBP1.8□□□□□ -2.12
AC055878.1-201ENST00000531858 ARHGEF12Q9NZN5 1544 aa1.8□□□□□ -2.12
AC055878.1-201ENST00000531858 LAMC3Q9Y6N6 1575 aa1.8□□□□□ -2.12
AC055878.1-201ENST00000531858 A0A087WTM6 91 aa1.79□□□□□ -2.12
AC055878.1-201ENST00000531858 J3QKU1 62 aa1.79□□□□□ -2.12
AC055878.1-201ENST00000531858 FXYD1O00168 92 aa1.79□□□□□ -2.12
AC055878.1-201ENST00000531858 Q5VV11 94 aa1.79□□□□□ -2.12
AC055878.1-201ENST00000531858 MANBALQ9NQG1 85 aa1.79□□□□□ -2.12
AC055878.1-201ENST00000531858 V9GYH0 126 aa1.79□□□□□ -2.12
AC055878.1-201ENST00000531858 ARHGAP35Q9NRY4 1499 aa1.79□□□□□ -2.12
AC055878.1-201ENST00000531858 EPRSP07814 1512 aaKnown RBP1.79□□□□□ -2.12
AC055878.1-201ENST00000531858 KIAA1551Q9HCM1 1747 aa1.79□□□□□ -2.12
AC055878.1-201ENST00000531858 MARF1Q9Y4F3 1742 aaKnown RBP1.79□□□□□ -2.12
AC055878.1-201ENST00000531858 TNRC6BQ9UPQ9 1833 aaKnown RBP1.79□□□□□ -2.12
AC055878.1-201ENST00000531858 TRPM7Q96QT4 1865 aa1.79□□□□□ -2.12
AC055878.1-201ENST00000531858 DOCK10Q96BY6 2186 aa1.79□□□□□ -2.12
AC055878.1-201ENST00000531858 COL4A4P53420 1690 aaPredicted RBP1.78□□□□□ -2.12
AC055878.1-201ENST00000531858 PHRF1Q9P1Y6 1649 aaKnown RBP1.78□□□□□ -2.12
AC055878.1-201ENST00000531858 DIP2CQ9Y2E4 1556 aa1.78□□□□□ -2.12
AC055878.1-201ENST00000531858 PLEKHH2Q8IVE3 1493 aa1.78□□□□□ -2.12
AC055878.1-201ENST00000531858 TRAV22A0A0B4J277 110 aa1.78□□□□□ -2.12
AC055878.1-201ENST00000531858 TRBV30A0A0K0K1B3 111 aa1.78□□□□□ -2.12
AC055878.1-201ENST00000531858 NCR3O14931 201 aa1.78□□□□□ -2.12
AC055878.1-201ENST00000531858 PPP1R17O96001 155 aa1.78□□□□□ -2.12
AC055878.1-201ENST00000531858 EFNA4P52798 201 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms