RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 FAM74A3Q4VXF1 159 aa11.32□□□□□ -0.6
HIF3A-211ENST00000528563 CT83Q5H943 113 aa11.32□□□□□ -0.6
HIF3A-211ENST00000528563 Q8N3U1 123 aa11.32□□□□□ -0.6
HIF3A-211ENST00000528563 TWIST1Q15672 202 aa11.32□□□□□ -0.6
HIF3A-211ENST00000528563 OSTCQ9NRP0 149 aa11.32□□□□□ -0.6
HIF3A-211ENST00000528563 MGPP08493 103 aa11.31□□□□□ -0.6
HIF3A-211ENST00000528563 SUMO4Q6EEV6 95 aa11.31□□□□□ -0.6
HIF3A-211ENST00000528563 NIT1Q86X76 327 aa11.31□□□□□ -0.6
HIF3A-211ENST00000528563 DPH3P1Q9H4G8 78 aa11.31□□□□□ -0.6
HIF3A-211ENST00000528563 DNAJC30Q96LL9 226 aa11.3□□□□□ -0.6
HIF3A-211ENST00000528563 TRBV6-8A0A0A6YYG3 113 aa11.29□□□□□ -0.6
HIF3A-211ENST00000528563 H7C1H1 209 aa11.29□□□□□ -0.6
HIF3A-211ENST00000528563 LAGE3Q14657 143 aa11.29□□□□□ -0.6
HIF3A-211ENST00000528563 DAZ4Q86SG3 579 aaKnown RBP11.29□□□□□ -0.6
HIF3A-211ENST00000528563 TSKUQ8WUA8 353 aa11.29□□□□□ -0.6
HIF3A-211ENST00000528563 PGLYRP4Q96LB8 373 aa11.29□□□□□ -0.6
HIF3A-211ENST00000528563 DAZ3Q9NR90 486 aaKnown RBP11.29□□□□□ -0.6
HIF3A-211ENST00000528563 FAM231BA6NCW3 169 aa11.28□□□□□ -0.6
HIF3A-211ENST00000528563 RPL23P62829 140 aaKnown RBP11.28□□□□□ -0.6
HIF3A-211ENST00000528563 RASL11AQ6T310 242 aa11.28□□□□□ -0.6
HIF3A-211ENST00000528563 SPATA12Q7Z6I5 190 aa11.28□□□□□ -0.6
HIF3A-211ENST00000528563 ISOC2Q96AB3 205 aa11.28□□□□□ -0.6
HIF3A-211ENST00000528563 GFRA4Q9GZZ7 299 aa11.28□□□□□ -0.6
HIF3A-211ENST00000528563 KRTAP10-2P60368 255 aa11.27□□□□□ -0.6
HIF3A-211ENST00000528563 NTM-AS1Q6ZSK4 140 aa11.27□□□□□ -0.6
HIF3A-211ENST00000528563 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.27□□□□□ -0.6
HIF3A-211ENST00000528563 NAT8Q9UHE5 227 aa11.27□□□□□ -0.6
HIF3A-211ENST00000528563 V9GYV3 84 aa11.27□□□□□ -0.6
HIF3A-211ENST00000528563 DNAH11Q96DT5 4516 aa11.26□□□□□ -0.61
HIF3A-211ENST00000528563 A0A087WTM6 91 aa11.26□□□□□ -0.61
HIF3A-211ENST00000528563 C15orf54Q8N8G6 183 aa11.26□□□□□ -0.61
HIF3A-211ENST00000528563 NIT2Q9NQR4 276 aa11.26□□□□□ -0.61
HIF3A-211ENST00000528563 HIGD1CA8MV81 97 aa11.25□□□□□ -0.61
HIF3A-211ENST00000528563 C16orf90A8MZG2 172 aa11.25□□□□□ -0.61
HIF3A-211ENST00000528563 TMEM97Q5BJF2 176 aa11.25□□□□□ -0.61
HIF3A-211ENST00000528563 CHCHD7Q9BUK0 85 aa11.25□□□□□ -0.61
HIF3A-211ENST00000528563 Q9HAA7 133 aa11.25□□□□□ -0.61
HIF3A-211ENST00000528563 URGCP-MRPS24S4R325 110 aa11.25□□□□□ -0.61
HIF3A-211ENST00000528563 GATD1Q8NB37 220 aa11.25□□□□□ -0.61
HIF3A-211ENST00000528563 KIAA1109Q2LD37 5005 aa11.24□□□□□ -0.61
HIF3A-211ENST00000528563 A0A087WX48 190 aa11.24□□□□□ -0.61
HIF3A-211ENST00000528563 TRAV8-3A0A0A6YYJ7 113 aa11.24□□□□□ -0.61
HIF3A-211ENST00000528563 A0A1B0GUT8 65 aa11.24□□□□□ -0.61
HIF3A-211ENST00000528563 EREGO14944 169 aa11.24□□□□□ -0.61
HIF3A-211ENST00000528563 RAB14P61106 215 aa11.24□□□□□ -0.61
HIF3A-211ENST00000528563 ADIRFQ15847 76 aa11.24□□□□□ -0.61
HIF3A-211ENST00000528563 SMIM15Q7Z3B0 74 aa11.24□□□□□ -0.61
HIF3A-211ENST00000528563 FRZBQ92765 325 aa11.24□□□□□ -0.61
HIF3A-211ENST00000528563 PGPEP1Q9NXJ5 209 aa11.24□□□□□ -0.61
HIF3A-211ENST00000528563 LRCOL1A6NCL2 159 aa11.23□□□□□ -0.61
HIF3A-211ENST00000528563 KLK12Q9UKR0 248 aa11.23□□□□□ -0.61
HIF3A-211ENST00000528563 TRAV26-2A0A0B4J265 109 aa11.22□□□□□ -0.61
HIF3A-211ENST00000528563 TMEM262E9PQX1 116 aa11.22□□□□□ -0.61
HIF3A-211ENST00000528563 PSCAO43653 123 aa11.22□□□□□ -0.61
HIF3A-211ENST00000528563 IQCJQ1A5X6 159 aa11.22□□□□□ -0.61
HIF3A-211ENST00000528563 BORCS7Q96B45 105 aa11.22□□□□□ -0.61
HIF3A-211ENST00000528563 CHCHD5Q9BSY4 110 aa11.22□□□□□ -0.61
HIF3A-211ENST00000528563 TM2D2Q9BX73 214 aa11.22□□□□□ -0.61
HIF3A-211ENST00000528563 ELOBQ15370 118 aa11.21□□□□□ -0.61
HIF3A-211ENST00000528563 NUP35Q8NFH5 326 aa11.21□□□□□ -0.61
HIF3A-211ENST00000528563 DYNC1H1Q14204 4646 aaKnown RBP11.21□□□□□ -0.62
HIF3A-211ENST00000528563 IFITM2Q01629 132 aa11.2□□□□□ -0.62
HIF3A-211ENST00000528563 CLLU1Q5K131 121 aa11.2□□□□□ -0.62
HIF3A-211ENST00000528563 KCNIP4Q6PIL6 250 aa11.2□□□□□ -0.62
HIF3A-211ENST00000528563 TMEM191AQ9H0A3 160 aa11.2□□□□□ -0.62
HIF3A-211ENST00000528563 TRBV25-1A0A075B6N4 114 aa11.19□□□□□ -0.62
HIF3A-211ENST00000528563 IGHV1-24A0A0C4DH33 117 aa11.19□□□□□ -0.62
HIF3A-211ENST00000528563 SMIM27A0A1W2PRY6 76 aa11.19□□□□□ -0.62
HIF3A-211ENST00000528563 MPV17L2Q567V2 206 aa11.19□□□□□ -0.62
HIF3A-211ENST00000528563 ATRAIDQ6UW56 229 aa11.19□□□□□ -0.62
HIF3A-211ENST00000528563 NAT8BQ9UHF3 227 aa11.19□□□□□ -0.62
HIF3A-211ENST00000528563 PKIAP61925 76 aa11.19□□□□□ -0.62
HIF3A-211ENST00000528563 MAPKAPK5-AS1Q8N8E1 139 aa11.19□□□□□ -0.62
HIF3A-211ENST00000528563 RPL39LQ96EH5 51 aaKnown RBP11.19□□□□□ -0.62
HIF3A-211ENST00000528563 FUSP35637 526 aaKnown RBP eCLIP11.18□□□□□ -0.62
HIF3A-211ENST00000528563 RIGQ13278 110 aa11.18□□□□□ -0.62
HIF3A-211ENST00000528563 CDPF1Q6NVV7 123 aa11.18□□□□□ -0.62
HIF3A-211ENST00000528563 ENHOQ6UWT2 76 aa11.18□□□□□ -0.62
HIF3A-211ENST00000528563 Q8N976 141 aa11.18□□□□□ -0.62
HIF3A-211ENST00000528563 UBE2WQ96B02 151 aa11.18□□□□□ -0.62
HIF3A-211ENST00000528563 RNF185Q96GF1 192 aa11.18□□□□□ -0.62
HIF3A-211ENST00000528563 COX11Q9Y6N1 276 aa11.18□□□□□ -0.62
HIF3A-211ENST00000528563 RAB4AP20338 218 aa11.17□□□□□ -0.62
HIF3A-211ENST00000528563 RBX1P62877 108 aa11.17□□□□□ -0.62
HIF3A-211ENST00000528563 GAGE6Q13070 117 aa11.17□□□□□ -0.62
HIF3A-211ENST00000528563 HERC2O95714 4834 aa11.17□□□□□ -0.62
HIF3A-211ENST00000528563 GAS8-AS1O95177 125 aa11.16□□□□□ -0.62
HIF3A-211ENST00000528563 Q0VG73 95 aa11.16□□□□□ -0.62
HIF3A-211ENST00000528563 DEFB104AQ8WTQ1 72 aa11.16□□□□□ -0.62
HIF3A-211ENST00000528563 RMI2Q96E14 147 aa11.16□□□□□ -0.62
HIF3A-211ENST00000528563 TMEM243Q9BU79 118 aa11.16□□□□□ -0.62
HIF3A-211ENST00000528563 TRBV6-5A0A0K0K1A5 114 aa11.15□□□□□ -0.62
HIF3A-211ENST00000528563 CDK2AP2O75956 126 aa11.15□□□□□ -0.62
HIF3A-211ENST00000528563 ANGP03950 147 aaKnown RBP11.15□□□□□ -0.62
HIF3A-211ENST00000528563 COTL1Q14019 142 aa11.15□□□□□ -0.62
HIF3A-211ENST00000528563 A0A1B0GUV1 79 aa11.14□□□□□ -0.63
HIF3A-211ENST00000528563 SDHAF1A6NFY7 115 aa11.14□□□□□ -0.63
HIF3A-211ENST00000528563 WFDC2Q14508 124 aa11.14□□□□□ -0.63
HIF3A-211ENST00000528563 AMN1Q8IY45 258 aa11.14□□□□□ -0.63
HIF3A-211ENST00000528563 Q8N814 137 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms