RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 CDPF1Q6NVV7 123 aa17.65■□□□□ 0.42
TSPAN4-217ENST00000527644 DAZ4Q86SG3 579 aaKnown RBP17.65■□□□□ 0.42
TSPAN4-217ENST00000527644 FAM210AQ96ND0 272 aa17.65■□□□□ 0.42
TSPAN4-217ENST00000527644 DAZ3Q9NR90 486 aaKnown RBP17.65■□□□□ 0.42
TSPAN4-217ENST00000527644 TRGC1P0CF51 173 aa17.64■□□□□ 0.41
TSPAN4-217ENST00000527644 CEBPGP53567 150 aa17.64■□□□□ 0.41
TSPAN4-217ENST00000527644 TRAV8-3A0A0A6YYJ7 113 aa17.63■□□□□ 0.41
TSPAN4-217ENST00000527644 MGPP08493 103 aa17.63■□□□□ 0.41
TSPAN4-217ENST00000527644 NTF3P20783 257 aa17.63■□□□□ 0.41
TSPAN4-217ENST00000527644 CTRLP40313 264 aa17.63■□□□□ 0.41
TSPAN4-217ENST00000527644 CHCHD7Q9BUK0 85 aa17.63■□□□□ 0.41
TSPAN4-217ENST00000527644 TM2D2Q9BX73 214 aa17.63■□□□□ 0.41
TSPAN4-217ENST00000527644 TRBV6-8A0A0A6YYG3 113 aa17.62■□□□□ 0.41
TSPAN4-217ENST00000527644 H7C1H1 209 aa17.61■□□□□ 0.41
TSPAN4-217ENST00000527644 FAM231DQ6ZW35 169 aa17.61■□□□□ 0.41
TSPAN4-217ENST00000527644 CNFNQ9BYD5 112 aa17.61■□□□□ 0.41
TSPAN4-217ENST00000527644 PCLOQ9Y6V0 5065 aa17.61■□□□□ 0.41
TSPAN4-217ENST00000527644 A0A087WX48 190 aa17.6■□□□□ 0.41
TSPAN4-217ENST00000527644 LRCOL1A6NCL2 159 aa17.6■□□□□ 0.41
TSPAN4-217ENST00000527644 M0QY20 66 aa17.6■□□□□ 0.41
TSPAN4-217ENST00000527644 TMEM97Q5BJF2 176 aa17.6■□□□□ 0.41
TSPAN4-217ENST00000527644 KCNIP4Q6PIL6 250 aa17.6■□□□□ 0.41
TSPAN4-217ENST00000527644 DNAJC30Q96LL9 226 aa17.6■□□□□ 0.41
TSPAN4-217ENST00000527644 DPH3P1Q9H4G8 78 aa17.6■□□□□ 0.41
TSPAN4-217ENST00000527644 GATCO43716 136 aaKnown RBP17.59■□□□□ 0.41
TSPAN4-217ENST00000527644 SUMO4Q6EEV6 95 aa17.59■□□□□ 0.41
TSPAN4-217ENST00000527644 SMIM7Q9BQ49 75 aa17.59■□□□□ 0.41
TSPAN4-217ENST00000527644 HSPG2P98160 4391 aa17.58■□□□□ 0.41
TSPAN4-217ENST00000527644 SRP19P09132 144 aaKnown RBP17.58■□□□□ 0.4
TSPAN4-217ENST00000527644 ELOBQ15370 118 aa17.58■□□□□ 0.4
TSPAN4-217ENST00000527644 TWIST1Q15672 202 aa17.58■□□□□ 0.4
TSPAN4-217ENST00000527644 FUSP35637 526 aaKnown RBP eCLIP17.57■□□□□ 0.4
TSPAN4-217ENST00000527644 GTSF1Q8WW33 167 aa17.57■□□□□ 0.4
TSPAN4-217ENST00000527644 APOBP04114 4563 aaKnown RBP17.56■□□□□ 0.4
TSPAN4-217ENST00000527644 ZNF727A8MUV8 499 aa17.56■□□□□ 0.4
TSPAN4-217ENST00000527644 A8MWL6 223 aa17.56■□□□□ 0.4
TSPAN4-217ENST00000527644 TMEM262E9PQX1 116 aa17.56■□□□□ 0.4
TSPAN4-217ENST00000527644 TEX261Q6UWH6 196 aa17.56■□□□□ 0.4
TSPAN4-217ENST00000527644 KLK12Q9UKR0 248 aa17.56■□□□□ 0.4
TSPAN4-217ENST00000527644 CT83Q5H943 113 aa17.55■□□□□ 0.4
TSPAN4-217ENST00000527644 RASL11AQ6T310 242 aa17.55■□□□□ 0.4
TSPAN4-217ENST00000527644 LINC01551Q86U37 167 aa17.55■□□□□ 0.4
TSPAN4-217ENST00000527644 COX11Q9Y6N1 276 aa17.55■□□□□ 0.4
TSPAN4-217ENST00000527644 PKIAP61925 76 aa17.54■□□□□ 0.4
TSPAN4-217ENST00000527644 NTM-AS1Q6ZSK4 140 aa17.54■□□□□ 0.4
TSPAN4-217ENST00000527644 RMI2Q96E14 147 aa17.54■□□□□ 0.4
TSPAN4-217ENST00000527644 CHCHD5Q9BSY4 110 aa17.53■□□□□ 0.4
TSPAN4-217ENST00000527644 Q8N814 137 aa17.52■□□□□ 0.4
TSPAN4-217ENST00000527644 NTN5Q8WTR8 489 aaPredicted RBP17.52■□□□□ 0.4
TSPAN4-217ENST00000527644 NIT2Q9NQR4 276 aa17.52■□□□□ 0.4
TSPAN4-217ENST00000527644 FOXA3P55318 350 aaPredicted RBP17.51■□□□□ 0.39
TSPAN4-217ENST00000527644 UBE2WQ96B02 151 aa17.51■□□□□ 0.39
TSPAN4-217ENST00000527644 TRBV25-1A0A075B6N4 114 aa17.5■□□□□ 0.39
TSPAN4-217ENST00000527644 Q0VG73 95 aa17.5■□□□□ 0.39
TSPAN4-217ENST00000527644 SMIM15Q7Z3B0 74 aa17.5■□□□□ 0.39
TSPAN4-217ENST00000527644 PGLYRP4Q96LB8 373 aa17.5■□□□□ 0.39
TSPAN4-217ENST00000527644 IQCJQ1A5X6 159 aa17.49■□□□□ 0.39
TSPAN4-217ENST00000527644 FAM74A3Q4VXF1 159 aa17.49■□□□□ 0.39
TSPAN4-217ENST00000527644 MPV17L2Q567V2 206 aa17.49■□□□□ 0.39
TSPAN4-217ENST00000527644 OSTCQ9NRP0 149 aa17.49■□□□□ 0.39
TSPAN4-217ENST00000527644 IGLV5-52A0A0A0MRZ9 124 aa17.48■□□□□ 0.39
TSPAN4-217ENST00000527644 GCSHP23434 173 aa17.48■□□□□ 0.39
TSPAN4-217ENST00000527644 FRZBQ92765 325 aa17.48■□□□□ 0.39
TSPAN4-217ENST00000527644 IGKV2D-24A0A075B6R9 120 aa17.47■□□□□ 0.39
TSPAN4-217ENST00000527644 IGHV1-24A0A0C4DH33 117 aa17.47■□□□□ 0.39
TSPAN4-217ENST00000527644 PEA15Q15121 130 aa17.47■□□□□ 0.39
TSPAN4-217ENST00000527644 TMEM241Q24JQ0 296 aa17.47■□□□□ 0.39
TSPAN4-217ENST00000527644 ATRAIDQ6UW56 229 aa17.47■□□□□ 0.39
TSPAN4-217ENST00000527644 MAPKAPK5-AS1Q8N8E1 139 aa17.47■□□□□ 0.39
TSPAN4-217ENST00000527644 C15orf54Q8N8G6 183 aa17.47■□□□□ 0.39
TSPAN4-217ENST00000527644 TSKUQ8WUA8 353 aa17.47■□□□□ 0.39
TSPAN4-217ENST00000527644 GFRA4Q9GZZ7 299 aa17.47■□□□□ 0.39
TSPAN4-217ENST00000527644 KRTAP10-1P60331 282 aa17.46■□□□□ 0.39
TSPAN4-217ENST00000527644 GATD1Q8NB37 220 aa17.46■□□□□ 0.39
TSPAN4-217ENST00000527644 BORCS7Q96B45 105 aa17.46■□□□□ 0.39
TSPAN4-217ENST00000527644 SMDT1Q9H4I9 107 aa17.46■□□□□ 0.39
TSPAN4-217ENST00000527644 FAM231BA6NCW3 169 aa17.45■□□□□ 0.38
TSPAN4-217ENST00000527644 ANGP03950 147 aaKnown RBP17.45■□□□□ 0.38
TSPAN4-217ENST00000527644 WFDC2Q14508 124 aa17.45■□□□□ 0.38
TSPAN4-217ENST00000527644 C9JQL5 133 aa17.44■□□□□ 0.38
TSPAN4-217ENST00000527644 CRPP02741 224 aa17.44■□□□□ 0.38
TSPAN4-217ENST00000527644 GAGE6Q13070 117 aa17.44■□□□□ 0.38
TSPAN4-217ENST00000527644 ENHOQ6UWT2 76 aa17.44■□□□□ 0.38
TSPAN4-217ENST00000527644 Q8N976 141 aa17.44■□□□□ 0.38
TSPAN4-217ENST00000527644 TRAV26-2A0A0B4J265 109 aa17.43■□□□□ 0.38
TSPAN4-217ENST00000527644 HIGD1CA8MV81 97 aa17.43■□□□□ 0.38
TSPAN4-217ENST00000527644 BAALCQ8WXS3 180 aa17.43■□□□□ 0.38
TSPAN4-217ENST00000527644 RBX1P62877 108 aa17.42■□□□□ 0.38
TSPAN4-217ENST00000527644 SRSF3P84103 164 aaKnown RBP17.42■□□□□ 0.38
TSPAN4-217ENST00000527644 ISOC2Q96AB3 205 aa17.42■□□□□ 0.38
TSPAN4-217ENST00000527644 NAT8Q9UHE5 227 aa17.42■□□□□ 0.38
TSPAN4-217ENST00000527644 A0A1B0GUT8 65 aa17.41■□□□□ 0.38
TSPAN4-217ENST00000527644 LECT2O14960 151 aa17.41■□□□□ 0.38
TSPAN4-217ENST00000527644 RPL23P62829 140 aaKnown RBP17.41■□□□□ 0.38
TSPAN4-217ENST00000527644 TMEM243Q9BU79 118 aa17.41■□□□□ 0.38
TSPAN4-217ENST00000527644 C1orf43Q9BWL3 253 aa17.41■□□□□ 0.38
TSPAN4-217ENST00000527644 V9GYV3 84 aa17.41■□□□□ 0.38
TSPAN4-217ENST00000527644 COTL1Q14019 142 aa17.4■□□□□ 0.38
TSPAN4-217ENST00000527644 Q8N1X5 172 aa17.4■□□□□ 0.38
TSPAN4-217ENST00000527644 MIAQ16674 131 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms