RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 SRP19P09132 144 aaKnown RBP12.12□□□□□ -0.47
TRIM3-205ENST00000527237 SUMO4Q6EEV6 95 aa12.12□□□□□ -0.47
TRIM3-205ENST00000527237 GTSF1Q8WW33 167 aa12.12□□□□□ -0.47
TRIM3-205ENST00000527237 LAGE3Q14657 143 aa12.11□□□□□ -0.47
TRIM3-205ENST00000527237 SMIM7Q9BQ49 75 aa12.11□□□□□ -0.47
TRIM3-205ENST00000527237 LRCOL1A6NCL2 159 aa12.1□□□□□ -0.47
TRIM3-205ENST00000527237 F2Z2F3 143 aa12.1□□□□□ -0.47
TRIM3-205ENST00000527237 PSCAO43653 123 aa12.1□□□□□ -0.47
TRIM3-205ENST00000527237 NTF3P20783 257 aa12.1□□□□□ -0.47
TRIM3-205ENST00000527237 M0QY20 66 aa12.09□□□□□ -0.47
TRIM3-205ENST00000527237 CNFNQ9BYD5 112 aa12.09□□□□□ -0.47
TRIM3-205ENST00000527237 TRBV6-8A0A0A6YYG3 113 aa12.08□□□□□ -0.48
TRIM3-205ENST00000527237 EREGO14944 169 aa12.08□□□□□ -0.48
TRIM3-205ENST00000527237 GATCO43716 136 aaKnown RBP12.08□□□□□ -0.48
TRIM3-205ENST00000527237 TRGC1P0CF51 173 aa12.08□□□□□ -0.48
TRIM3-205ENST00000527237 WFDC2Q14508 124 aa12.08□□□□□ -0.48
TRIM3-205ENST00000527237 TEX261Q6UWH6 196 aa12.08□□□□□ -0.48
TRIM3-205ENST00000527237 NTM-AS1Q6ZSK4 140 aa12.08□□□□□ -0.48
TRIM3-205ENST00000527237 FAM231DQ6ZW35 169 aa12.08□□□□□ -0.48
TRIM3-205ENST00000527237 DPH3P1Q9H4G8 78 aa12.08□□□□□ -0.48
TRIM3-205ENST00000527237 ZNF727A8MUV8 499 aa12.07□□□□□ -0.48
TRIM3-205ENST00000527237 C9JQL5 133 aa12.07□□□□□ -0.48
TRIM3-205ENST00000527237 SRSF3P84103 164 aaKnown RBP12.07□□□□□ -0.48
TRIM3-205ENST00000527237 LINC01551Q86U37 167 aa12.07□□□□□ -0.48
TRIM3-205ENST00000527237 KLK12Q9UKR0 248 aa12.07□□□□□ -0.48
TRIM3-205ENST00000527237 URGCP-MRPS24S4R325 110 aa12.07□□□□□ -0.48
TRIM3-205ENST00000527237 NDUFS6O75380 124 aaKnown RBP12.06□□□□□ -0.48
TRIM3-205ENST00000527237 CDK2AP2O75956 126 aa12.06□□□□□ -0.48
TRIM3-205ENST00000527237 TWIST1Q15672 202 aa12.06□□□□□ -0.48
TRIM3-205ENST00000527237 MPV17L2Q567V2 206 aa12.06□□□□□ -0.48
TRIM3-205ENST00000527237 FOXA3P55318 350 aaPredicted RBP12.05□□□□□ -0.48
TRIM3-205ENST00000527237 WDR73Q6P4I2 378 aa12.05□□□□□ -0.48
TRIM3-205ENST00000527237 MAPKAPK5-AS1Q8N8E1 139 aa12.05□□□□□ -0.48
TRIM3-205ENST00000527237 DEFB104AQ8WTQ1 72 aa12.05□□□□□ -0.48
TRIM3-205ENST00000527237 PGLYRP4Q96LB8 373 aa12.05□□□□□ -0.48
TRIM3-205ENST00000527237 KRTAP4-5Q9BYR2 181 aa12.05□□□□□ -0.48
TRIM3-205ENST00000527237 A0A087WX48 190 aa12.04□□□□□ -0.48
TRIM3-205ENST00000527237 TRAV26-2A0A0B4J265 109 aa12.04□□□□□ -0.48
TRIM3-205ENST00000527237 RASL11AQ6T310 242 aa12.04□□□□□ -0.48
TRIM3-205ENST00000527237 TRAV8-3A0A0A6YYJ7 113 aa12.03□□□□□ -0.48
TRIM3-205ENST00000527237 H7C1H1 209 aa12.03□□□□□ -0.48
TRIM3-205ENST00000527237 LECT2O14960 151 aa12.03□□□□□ -0.48
TRIM3-205ENST00000527237 KRTAP10-1P60331 282 aa12.03□□□□□ -0.48
TRIM3-205ENST00000527237 CDPF1Q6NVV7 123 aa12.03□□□□□ -0.48
TRIM3-205ENST00000527237 UBE2WQ96B02 151 aa12.03□□□□□ -0.48
TRIM3-205ENST00000527237 CHCHD5Q9BSY4 110 aa12.03□□□□□ -0.48
TRIM3-205ENST00000527237 PGPEP1Q9NXJ5 209 aa12.03□□□□□ -0.48
TRIM3-205ENST00000527237 A8MWL6 223 aa12.02□□□□□ -0.49
TRIM3-205ENST00000527237 TMEM262E9PQX1 116 aa12.02□□□□□ -0.49
TRIM3-205ENST00000527237 CT83Q5H943 113 aa12.02□□□□□ -0.49
TRIM3-205ENST00000527237 Q8N814 137 aa12.02□□□□□ -0.49
TRIM3-205ENST00000527237 C15orf54Q8N8G6 183 aa12.02□□□□□ -0.49
TRIM3-205ENST00000527237 Q8N976 141 aa12.02□□□□□ -0.49
TRIM3-205ENST00000527237 CHCHD7Q9BUK0 85 aa12.02□□□□□ -0.49
TRIM3-205ENST00000527237 PCLOQ9Y6V0 5065 aa12.01□□□□□ -0.49
TRIM3-205ENST00000527237 IGKV2D-24A0A075B6R9 120 aa12.01□□□□□ -0.49
TRIM3-205ENST00000527237 GAGE6Q13070 117 aa12.01□□□□□ -0.49
TRIM3-205ENST00000527237 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.01□□□□□ -0.49
TRIM3-205ENST00000527237 GATD1Q8NB37 220 aa12.01□□□□□ -0.49
TRIM3-205ENST00000527237 TM2D2Q9BX73 214 aa12.01□□□□□ -0.49
TRIM3-205ENST00000527237 RPL23P62829 140 aaKnown RBP12□□□□□ -0.49
TRIM3-205ENST00000527237 KCNIP4Q6PIL6 250 aa12□□□□□ -0.49
TRIM3-205ENST00000527237 ATRAIDQ6UW56 229 aa12□□□□□ -0.49
TRIM3-205ENST00000527237 ISOC2Q96AB3 205 aa12□□□□□ -0.49
TRIM3-205ENST00000527237 RPL39LQ96EH5 51 aaKnown RBP12□□□□□ -0.49
TRIM3-205ENST00000527237 NIT2Q9NQR4 276 aa12□□□□□ -0.49
TRIM3-205ENST00000527237 OSTCQ9NRP0 149 aa12□□□□□ -0.49
TRIM3-205ENST00000527237 V9GYV3 84 aa12□□□□□ -0.49
TRIM3-205ENST00000527237 TRBV25-1A0A075B6N4 114 aa11.99□□□□□ -0.49
TRIM3-205ENST00000527237 HIGD1CA8MV81 97 aa11.99□□□□□ -0.49
TRIM3-205ENST00000527237 IQCJQ1A5X6 159 aa11.99□□□□□ -0.49
TRIM3-205ENST00000527237 TMEM97Q5BJF2 176 aa11.99□□□□□ -0.49
TRIM3-205ENST00000527237 CLPSL2Q6UWE3 100 aa11.99□□□□□ -0.49
TRIM3-205ENST00000527237 ENHOQ6UWT2 76 aa11.99□□□□□ -0.49
TRIM3-205ENST00000527237 BAALCQ8WXS3 180 aa11.99□□□□□ -0.49
TRIM3-205ENST00000527237 IGLV5-52A0A0A0MRZ9 124 aa11.98□□□□□ -0.49
TRIM3-205ENST00000527237 IGHV1-24A0A0C4DH33 117 aa11.98□□□□□ -0.49
TRIM3-205ENST00000527237 ANGP03950 147 aaKnown RBP11.98□□□□□ -0.49
TRIM3-205ENST00000527237 ADIRFQ15847 76 aa11.98□□□□□ -0.49
TRIM3-205ENST00000527237 TSKUQ8WUA8 353 aa11.98□□□□□ -0.49
TRIM3-205ENST00000527237 ABCA13Q86UQ4 5058 aa11.98□□□□□ -0.49
TRIM3-205ENST00000527237 GAS8-AS1O95177 125 aa11.97□□□□□ -0.49
TRIM3-205ENST00000527237 RBX1P62877 108 aa11.97□□□□□ -0.49
TRIM3-205ENST00000527237 ELOBQ15370 118 aa11.97□□□□□ -0.49
TRIM3-205ENST00000527237 TMEM241Q24JQ0 296 aa11.97□□□□□ -0.49
TRIM3-205ENST00000527237 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.96□□□□□ -0.49
TRIM3-205ENST00000527237 GCSHP23434 173 aa11.96□□□□□ -0.49
TRIM3-205ENST00000527237 PEA15Q15121 130 aa11.96□□□□□ -0.49
TRIM3-205ENST00000527237 FAM74A3Q4VXF1 159 aa11.96□□□□□ -0.49
TRIM3-205ENST00000527237 RMI2Q96E14 147 aa11.96□□□□□ -0.49
TRIM3-205ENST00000527237 GFRA4Q9GZZ7 299 aa11.96□□□□□ -0.49
TRIM3-205ENST00000527237 NAT8Q9UHE5 227 aa11.96□□□□□ -0.49
TRIM3-205ENST00000527237 A0A1B0GUT8 65 aa11.95□□□□□ -0.5
TRIM3-205ENST00000527237 CRPP02741 224 aa11.95□□□□□ -0.5
TRIM3-205ENST00000527237 XGP55808 180 aa11.95□□□□□ -0.5
TRIM3-205ENST00000527237 HAMPP81172 84 aa11.95□□□□□ -0.5
TRIM3-205ENST00000527237 SMIM15Q7Z3B0 74 aa11.95□□□□□ -0.5
TRIM3-205ENST00000527237 NTN5Q8WTR8 489 aaPredicted RBP11.95□□□□□ -0.5
TRIM3-205ENST00000527237 NUP35Q8NFH5 326 aa11.94□□□□□ -0.5
TRIM3-205ENST00000527237 BORCS7Q96B45 105 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms