RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 NIT1Q86X76 327 aa14.04□□□□□ -0.16
TRAPPC9-215ENST00000524162 LRP1BQ9NZR2 4599 aa14.04□□□□□ -0.16
TRAPPC9-215ENST00000524162 TRBV6-8A0A0A6YYG3 113 aa14.03□□□□□ -0.16
TRAPPC9-215ENST00000524162 C16orf90A8MZG2 172 aa14.03□□□□□ -0.16
TRAPPC9-215ENST00000524162 M0QY20 66 aa14.03□□□□□ -0.16
TRAPPC9-215ENST00000524162 CDPF1Q6NVV7 123 aa14.03□□□□□ -0.16
TRAPPC9-215ENST00000524162 SPATA12Q7Z6I5 190 aa14.03□□□□□ -0.16
TRAPPC9-215ENST00000524162 LINC01551Q86U37 167 aa14.03□□□□□ -0.16
TRAPPC9-215ENST00000524162 DPH3P1Q9H4G8 78 aa14.03□□□□□ -0.16
TRAPPC9-215ENST00000524162 PGPEP1Q9NXJ5 209 aa14.03□□□□□ -0.16
TRAPPC9-215ENST00000524162 TRAV8-3A0A0A6YYJ7 113 aa14.02□□□□□ -0.17
TRAPPC9-215ENST00000524162 FAM231BA6NCW3 169 aa14.02□□□□□ -0.17
TRAPPC9-215ENST00000524162 ZNF727A8MUV8 499 aa14.02□□□□□ -0.17
TRAPPC9-215ENST00000524162 GATCO43716 136 aaKnown RBP14.02□□□□□ -0.17
TRAPPC9-215ENST00000524162 PKIAP61925 76 aa14.02□□□□□ -0.17
TRAPPC9-215ENST00000524162 FRZBQ92765 325 aa14.02□□□□□ -0.17
TRAPPC9-215ENST00000524162 A0A087WTM6 91 aa14.01□□□□□ -0.17
TRAPPC9-215ENST00000524162 IGHV3-30P01768 117 aa14.01□□□□□ -0.17
TRAPPC9-215ENST00000524162 IGHV3-33P01772 117 aa14.01□□□□□ -0.17
TRAPPC9-215ENST00000524162 IGHV3-30-3P0DP02 117 aa14.01□□□□□ -0.17
TRAPPC9-215ENST00000524162 IGHV3-30-5P0DP03 117 aa14.01□□□□□ -0.17
TRAPPC9-215ENST00000524162 SSTP61278 116 aa14.01□□□□□ -0.17
TRAPPC9-215ENST00000524162 GTSF1Q8WW33 167 aa14.01□□□□□ -0.17
TRAPPC9-215ENST00000524162 GFRA4Q9GZZ7 299 aa14.01□□□□□ -0.17
TRAPPC9-215ENST00000524162 URGCP-MRPS24S4R325 110 aa14.01□□□□□ -0.17
TRAPPC9-215ENST00000524162 CEBPGP53567 150 aa14□□□□□ -0.17
TRAPPC9-215ENST00000524162 ELOBQ15370 118 aa14□□□□□ -0.17
TRAPPC9-215ENST00000524162 TM2D2Q9BX73 214 aa14□□□□□ -0.17
TRAPPC9-215ENST00000524162 OSTCQ9NRP0 149 aa14□□□□□ -0.17
TRAPPC9-215ENST00000524162 DNAH5Q8TE73 4624 aa14□□□□□ -0.17
TRAPPC9-215ENST00000524162 PEA15Q15121 130 aa13.99□□□□□ -0.17
TRAPPC9-215ENST00000524162 COX11Q9Y6N1 276 aa13.99□□□□□ -0.17
TRAPPC9-215ENST00000524162 CDK2AP2O75956 126 aa13.98□□□□□ -0.17
TRAPPC9-215ENST00000524162 KRTAP10-2P60368 255 aa13.98□□□□□ -0.17
TRAPPC9-215ENST00000524162 TWIST1Q15672 202 aa13.98□□□□□ -0.17
TRAPPC9-215ENST00000524162 SUMO4Q6EEV6 95 aa13.98□□□□□ -0.17
TRAPPC9-215ENST00000524162 RASL11AQ6T310 242 aa13.98□□□□□ -0.17
TRAPPC9-215ENST00000524162 A0A087WX48 190 aa13.97□□□□□ -0.17
TRAPPC9-215ENST00000524162 MGPP08493 103 aa13.97□□□□□ -0.17
TRAPPC9-215ENST00000524162 TMEM241Q24JQ0 296 aa13.97□□□□□ -0.17
TRAPPC9-215ENST00000524162 TSKUQ8WUA8 353 aa13.97□□□□□ -0.17
TRAPPC9-215ENST00000524162 NIT2Q9NQR4 276 aa13.97□□□□□ -0.17
TRAPPC9-215ENST00000524162 PSCAO43653 123 aa13.96□□□□□ -0.17
TRAPPC9-215ENST00000524162 KCNIP4Q6PIL6 250 aa13.96□□□□□ -0.17
TRAPPC9-215ENST00000524162 SMIM15Q7Z3B0 74 aa13.96□□□□□ -0.17
TRAPPC9-215ENST00000524162 LRCOL1A6NCL2 159 aa13.95□□□□□ -0.18
TRAPPC9-215ENST00000524162 Q8N3U1 123 aa13.95□□□□□ -0.18
TRAPPC9-215ENST00000524162 C15orf54Q8N8G6 183 aa13.95□□□□□ -0.18
TRAPPC9-215ENST00000524162 PGLYRP4Q96LB8 373 aa13.95□□□□□ -0.18
TRAPPC9-215ENST00000524162 RYR1P21817 5038 aa13.95□□□□□ -0.18
TRAPPC9-215ENST00000524162 IQCJQ1A5X6 159 aa13.94□□□□□ -0.18
TRAPPC9-215ENST00000524162 ATRAIDQ6UW56 229 aa13.94□□□□□ -0.18
TRAPPC9-215ENST00000524162 RMI2Q96E14 147 aa13.94□□□□□ -0.18
TRAPPC9-215ENST00000524162 Q9HAA7 133 aa13.94□□□□□ -0.18
TRAPPC9-215ENST00000524162 NAT8Q9UHE5 227 aa13.94□□□□□ -0.18
TRAPPC9-215ENST00000524162 HSPG2P98160 4391 aa13.94□□□□□ -0.18
TRAPPC9-215ENST00000524162 TRBV25-1A0A075B6N4 114 aa13.93□□□□□ -0.18
TRAPPC9-215ENST00000524162 NTM-AS1Q6ZSK4 140 aa13.93□□□□□ -0.18
TRAPPC9-215ENST00000524162 NTN5Q8WTR8 489 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC9-215ENST00000524162 ISOC2Q96AB3 205 aa13.93□□□□□ -0.18
TRAPPC9-215ENST00000524162 BORCS7Q96B45 105 aa13.93□□□□□ -0.18
TRAPPC9-215ENST00000524162 A0A1B0GUT8 65 aa13.92□□□□□ -0.18
TRAPPC9-215ENST00000524162 HIGD1CA8MV81 97 aa13.92□□□□□ -0.18
TRAPPC9-215ENST00000524162 C9JQL5 133 aa13.92□□□□□ -0.18
TRAPPC9-215ENST00000524162 RPL23P62829 140 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-215ENST00000524162 Q0VG73 95 aa13.92□□□□□ -0.18
TRAPPC9-215ENST00000524162 V9GYV3 84 aa13.92□□□□□ -0.18
TRAPPC9-215ENST00000524162 APOBP04114 4563 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-215ENST00000524162 IGHV1-24A0A0C4DH33 117 aa13.9□□□□□ -0.18
TRAPPC9-215ENST00000524162 SRSF3P84103 164 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-215ENST00000524162 CHCHD5Q9BSY4 110 aa13.9□□□□□ -0.18
TRAPPC9-215ENST00000524162 KLK12Q9UKR0 248 aa13.9□□□□□ -0.18
TRAPPC9-215ENST00000524162 TMEM262E9PQX1 116 aa13.89□□□□□ -0.19
TRAPPC9-215ENST00000524162 GATD1Q8NB37 220 aa13.89□□□□□ -0.19
TRAPPC9-215ENST00000524162 TMEM191AQ9H0A3 160 aa13.89□□□□□ -0.19
TRAPPC9-215ENST00000524162 MPV17L2Q567V2 206 aa13.88□□□□□ -0.19
TRAPPC9-215ENST00000524162 RAB14P61106 215 aa13.87□□□□□ -0.19
TRAPPC9-215ENST00000524162 Q8N814 137 aa13.87□□□□□ -0.19
TRAPPC9-215ENST00000524162 A0A1B0GUV1 79 aa13.86□□□□□ -0.19
TRAPPC9-215ENST00000524162 ADIRFQ15847 76 aa13.86□□□□□ -0.19
TRAPPC9-215ENST00000524162 UBE2WQ96B02 151 aa13.86□□□□□ -0.19
TRAPPC9-215ENST00000524162 PRR34Q9NV39 138 aa13.86□□□□□ -0.19
TRAPPC9-215ENST00000524162 NAT8BQ9UHF3 227 aa13.86□□□□□ -0.19
TRAPPC9-215ENST00000524162 TRBV6-5A0A0K0K1A5 114 aa13.85□□□□□ -0.19
TRAPPC9-215ENST00000524162 NCR2O95944 276 aa13.85□□□□□ -0.19
TRAPPC9-215ENST00000524162 MIAQ16674 131 aa13.85□□□□□ -0.19
TRAPPC9-215ENST00000524162 NUP35Q8NFH5 326 aa13.85□□□□□ -0.19
TRAPPC9-215ENST00000524162 SMIM27A0A1W2PRY6 76 aa13.84□□□□□ -0.19
TRAPPC9-215ENST00000524162 RIGQ13278 110 aa13.84□□□□□ -0.19
TRAPPC9-215ENST00000524162 COTL1Q14019 142 aa13.84□□□□□ -0.19
TRAPPC9-215ENST00000524162 ENHOQ6UWT2 76 aa13.84□□□□□ -0.19
TRAPPC9-215ENST00000524162 TMEM243Q9BU79 118 aa13.84□□□□□ -0.19
TRAPPC9-215ENST00000524162 TRAV26-2A0A0B4J265 109 aa13.83□□□□□ -0.2
TRAPPC9-215ENST00000524162 CRPP02741 224 aa13.83□□□□□ -0.2
TRAPPC9-215ENST00000524162 ANGP03950 147 aaKnown RBP13.83□□□□□ -0.2
TRAPPC9-215ENST00000524162 RBX1P62877 108 aa13.83□□□□□ -0.2
TRAPPC9-215ENST00000524162 MAPKAPK5-AS1Q8N8E1 139 aa13.83□□□□□ -0.2
TRAPPC9-215ENST00000524162 IGKV2D-24A0A075B6R9 120 aa13.82□□□□□ -0.2
TRAPPC9-215ENST00000524162 A0A1B0GW15 77 aa13.82□□□□□ -0.2
TRAPPC9-215ENST00000524162 MRAP2Q96G30 205 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms