RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 OR8B2Q96RD0 313 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 GTSF1LQ9H1H1 148 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 SDF2L1Q9HCN8 221 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 FKBP11Q9NYL4 201 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 LAMTOR3Q9UHA4 124 aa3.68□□□□□ -1.82
PABPC1-223ENST00000523636 TRBV19A0A075B6N1 114 aa3.67□□□□□ -1.82
PABPC1-223ENST00000523636 TRBV24-1A0A075B6N3 115 aa3.67□□□□□ -1.82
PABPC1-223ENST00000523636 IGHV6-1A0A0B4J1U7 121 aa3.67□□□□□ -1.82
PABPC1-223ENST00000523636 ODAMA1E959 279 aa3.67□□□□□ -1.82
PABPC1-223ENST00000523636 A6NDX4 124 aa3.67□□□□□ -1.82
PABPC1-223ENST00000523636 KRTAP29-1A8MX34 341 aaPredicted RBP3.67□□□□□ -1.82
PABPC1-223ENST00000523636 PSPHP1O15172 72 aa3.67□□□□□ -1.82
PABPC1-223ENST00000523636 IGKV1-39P01597 117 aa3.67□□□□□ -1.82
PABPC1-223ENST00000523636 IGKV1D-39P04432 117 aa3.67□□□□□ -1.82
PABPC1-223ENST00000523636 PRSS1P07477 247 aa3.67□□□□□ -1.82
PABPC1-223ENST00000523636 GATA2P23769 480 aaPredicted RBP3.67□□□□□ -1.82
PABPC1-223ENST00000523636 ZNF816Q0VGE8 651 aaPredicted RBP3.67□□□□□ -1.82
PABPC1-223ENST00000523636 DEFB136Q30KP8 78 aa3.67□□□□□ -1.82
PABPC1-223ENST00000523636 LELP1Q5T871 98 aa3.67□□□□□ -1.82
PABPC1-223ENST00000523636 Q6Q795 121 aa3.67□□□□□ -1.82
PABPC1-223ENST00000523636 UNQ9165/PRO28630Q6UXU0 137 aa3.67□□□□□ -1.82
PABPC1-223ENST00000523636 WDR86Q86TI4 376 aa3.67□□□□□ -1.82
PABPC1-223ENST00000523636 DYNAPQ8N1N2 210 aa3.67□□□□□ -1.82
PABPC1-223ENST00000523636 TMEM75Q8N9X5 138 aa3.67□□□□□ -1.82
PABPC1-223ENST00000523636 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.67□□□□□ -1.82
PABPC1-223ENST00000523636 FRZBQ92765 325 aa3.67□□□□□ -1.82
PABPC1-223ENST00000523636 SMIM7Q9BQ49 75 aa3.67□□□□□ -1.82
PABPC1-223ENST00000523636 DERL1Q9BUN8 251 aa3.67□□□□□ -1.82
PABPC1-223ENST00000523636 NPVFQ9HCQ7 196 aa3.67□□□□□ -1.82
PABPC1-223ENST00000523636 LINC00527Q9UJ94 153 aa3.67□□□□□ -1.82
PABPC1-223ENST00000523636 AMMECR1Q9Y4X0 333 aaPredicted RBP3.67□□□□□ -1.82
PABPC1-223ENST00000523636 IGHV1OR15-1A0A075B7D0 117 aa3.66□□□□□ -1.82
PABPC1-223ENST00000523636 TRGV10A0A0A0MS01 117 aa3.66□□□□□ -1.82
PABPC1-223ENST00000523636 TRAV8-1A0A0A6YYK1 113 aa3.66□□□□□ -1.82
PABPC1-223ENST00000523636 IGHV2-26A0A0B4J1V2 119 aa3.66□□□□□ -1.82
PABPC1-223ENST00000523636 UBE2L5PA0A1B0GUS4 154 aa3.66□□□□□ -1.82
PABPC1-223ENST00000523636 C17orf98A8MV24 154 aa3.66□□□□□ -1.82
PABPC1-223ENST00000523636 FNDC10F2Z333 226 aa3.66□□□□□ -1.82
PABPC1-223ENST00000523636 GPX1P07203 203 aa3.66□□□□□ -1.82
PABPC1-223ENST00000523636 P0C879 139 aa3.66□□□□□ -1.82
PABPC1-223ENST00000523636 IGLC6P0CF74 106 aa3.66□□□□□ -1.82
PABPC1-223ENST00000523636 OPRK1P41145 380 aa3.66□□□□□ -1.82
PABPC1-223ENST00000523636 HERVK_113P63121 156 aa3.66□□□□□ -1.82
PABPC1-223ENST00000523636 REG3AQ06141 175 aa3.66□□□□□ -1.82
PABPC1-223ENST00000523636 EIF4EBP1Q13541 118 aaPredicted RBP3.66□□□□□ -1.82
PABPC1-223ENST00000523636 KIAA0087Q14695 138 aa3.66□□□□□ -1.82
PABPC1-223ENST00000523636 ADIRFQ15847 76 aa3.66□□□□□ -1.82
PABPC1-223ENST00000523636 C17orf58Q2M2W7 97 aa3.66□□□□□ -1.82
PABPC1-223ENST00000523636 LYRM7Q5U5X0 104 aa3.66□□□□□ -1.82
PABPC1-223ENST00000523636 CYP2G1PQ6ZSU1 146 aa3.66□□□□□ -1.82
PABPC1-223ENST00000523636 NFE4Q86UQ8 179 aa3.66□□□□□ -1.82
PABPC1-223ENST00000523636 CD177Q8N6Q3 437 aa3.66□□□□□ -1.82
PABPC1-223ENST00000523636 NAA38Q9BRA0 125 aaKnown RBP3.66□□□□□ -1.82
PABPC1-223ENST00000523636 NPCDR1Q9BY65 106 aa3.66□□□□□ -1.82
PABPC1-223ENST00000523636 MDFICQ9P1T7 246 aa3.66□□□□□ -1.82
PABPC1-223ENST00000523636 IGLC7A0M8Q6 106 aa3.65□□□□□ -1.83
PABPC1-223ENST00000523636 M0R1X1 148 aa3.65□□□□□ -1.83
PABPC1-223ENST00000523636 DPM2O94777 84 aa3.65□□□□□ -1.83
PABPC1-223ENST00000523636 FSTL3O95633 263 aa3.65□□□□□ -1.83
PABPC1-223ENST00000523636 TRGC2P03986 189 aa3.65□□□□□ -1.83
PABPC1-223ENST00000523636 RPL30P62888 115 aaKnown RBP3.65□□□□□ -1.83
PABPC1-223ENST00000523636 RPL36AP83881 106 aaKnown RBP3.65□□□□□ -1.83
PABPC1-223ENST00000523636 RTL8BQ17RB0 113 aa3.65□□□□□ -1.83
PABPC1-223ENST00000523636 LINC00322Q6ZN03 302 aaPredicted RBP3.65□□□□□ -1.83
PABPC1-223ENST00000523636 ZNF826PQ6ZT77 177 aa3.65□□□□□ -1.83
PABPC1-223ENST00000523636 OR2T10Q8NGZ9 312 aa3.65□□□□□ -1.83
PABPC1-223ENST00000523636 ZC2HC1AQ96GY0 325 aa3.65□□□□□ -1.83
PABPC1-223ENST00000523636 KCNS1Q96KK3 526 aa3.65□□□□□ -1.83
PABPC1-223ENST00000523636 AP1S3Q96PC3 154 aa3.65□□□□□ -1.83
PABPC1-223ENST00000523636 PYGO2Q9BRQ0 406 aa3.65□□□□□ -1.83
PABPC1-223ENST00000523636 MRPL32Q9BYC8 188 aaKnown RBP3.65□□□□□ -1.83
PABPC1-223ENST00000523636 ZNF580Q9UK33 172 aa3.65□□□□□ -1.83
PABPC1-223ENST00000523636 TRAV9-1A0A075B6T8 112 aa3.64□□□□□ -1.83
PABPC1-223ENST00000523636 IGHV3-64DA0A0J9YX35 117 aa3.64□□□□□ -1.83
PABPC1-223ENST00000523636 PMS2P5A8MQ11 134 aa3.64□□□□□ -1.83
PABPC1-223ENST00000523636 C11orf94C9JXX5 98 aa3.64□□□□□ -1.83
PABPC1-223ENST00000523636 H0YJW9 148 aa3.64□□□□□ -1.83
PABPC1-223ENST00000523636 J3QQQ9 107 aa3.64□□□□□ -1.83
PABPC1-223ENST00000523636 GYPAP02724 150 aa3.64□□□□□ -1.83
PABPC1-223ENST00000523636 CXCL1P09341 107 aa3.64□□□□□ -1.83
PABPC1-223ENST00000523636 TRGC1P0CF51 173 aa3.64□□□□□ -1.83
PABPC1-223ENST00000523636 CGB3P0DN86 165 aa3.64□□□□□ -1.83
PABPC1-223ENST00000523636 CGB7P0DN87 165 aa3.64□□□□□ -1.83
PABPC1-223ENST00000523636 ASIPP42127 132 aa3.64□□□□□ -1.83
PABPC1-223ENST00000523636 EDDM3BP56851 147 aa3.64□□□□□ -1.83
PABPC1-223ENST00000523636 RPL23P62829 140 aaKnown RBP3.64□□□□□ -1.83
PABPC1-223ENST00000523636 ERHP84090 104 aaKnown RBP3.64□□□□□ -1.83
PABPC1-223ENST00000523636 AMMECR1LQ6DCA0 310 aa3.64□□□□□ -1.83
PABPC1-223ENST00000523636 KLHL30-AS1Q8NEE0 82 aa3.64□□□□□ -1.83
PABPC1-223ENST00000523636 OR4X2Q8NGF9 303 aa3.64□□□□□ -1.83
PABPC1-223ENST00000523636 VSTM2AQ8TAG5 236 aa3.64□□□□□ -1.83
PABPC1-223ENST00000523636 UBALD1Q8TB05 177 aa3.64□□□□□ -1.83
PABPC1-223ENST00000523636 VAMP8Q9BV40 100 aa3.64□□□□□ -1.83
PABPC1-223ENST00000523636 MRPL20Q9BYC9 149 aaKnown RBP3.64□□□□□ -1.83
PABPC1-223ENST00000523636 COMMD5Q9GZQ3 224 aa3.64□□□□□ -1.83
PABPC1-223ENST00000523636 LY96Q9Y6Y9 160 aa3.64□□□□□ -1.83
PABPC1-223ENST00000523636 ARL2-SNX15V9GYD0 113 aa3.64□□□□□ -1.83
PABPC1-223ENST00000523636 IGKV1D-17A0A075B6S4 117 aa3.63□□□□□ -1.83
PABPC1-223ENST00000523636 IGHV3-43A0A0B4J1X8 118 aa3.63□□□□□ -1.83
PABPC1-223ENST00000523636 IGHV3-43DP0DP04 118 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms