RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 FOXA3P55318 350 aaPredicted RBP11.98□□□□□ -0.49
CLK4-211ENST00000522556 ERVFC1-1P60608 527 aa11.98□□□□□ -0.49
CLK4-211ENST00000522556 CNFNQ9BYD5 112 aa11.98□□□□□ -0.49
CLK4-211ENST00000522556 C10orf126Q8N4M7 172 aa11.97□□□□□ -0.49
CLK4-211ENST00000522556 PGLYRP4Q96LB8 373 aa11.97□□□□□ -0.49
CLK4-211ENST00000522556 C16orf90A8MZG2 172 aa11.96□□□□□ -0.49
CLK4-211ENST00000522556 TWIST1Q15672 202 aa11.96□□□□□ -0.49
CLK4-211ENST00000522556 NTM-AS1Q6ZSK4 140 aa11.96□□□□□ -0.49
CLK4-211ENST00000522556 NIT1Q86X76 327 aa11.96□□□□□ -0.49
CLK4-211ENST00000522556 HERC2O95714 4834 aa11.95□□□□□ -0.5
CLK4-211ENST00000522556 A0A087WWC5 75 aa11.95□□□□□ -0.5
CLK4-211ENST00000522556 K7EP13 123 aa11.95□□□□□ -0.5
CLK4-211ENST00000522556 TRGC1P0CF51 173 aa11.95□□□□□ -0.5
CLK4-211ENST00000522556 RPL23P62829 140 aaKnown RBP11.95□□□□□ -0.5
CLK4-211ENST00000522556 DEFB104AQ8WTQ1 72 aa11.95□□□□□ -0.5
CLK4-211ENST00000522556 DPH3P1Q9H4G8 78 aa11.95□□□□□ -0.5
CLK4-211ENST00000522556 A0A087WTM6 91 aa11.94□□□□□ -0.5
CLK4-211ENST00000522556 TRAV26-2A0A0B4J265 109 aa11.94□□□□□ -0.5
CLK4-211ENST00000522556 NFE4Q86UQ8 179 aa11.94□□□□□ -0.5
CLK4-211ENST00000522556 ISOC2Q96AB3 205 aa11.94□□□□□ -0.5
CLK4-211ENST00000522556 TRBV6-8A0A0A6YYG3 113 aa11.93□□□□□ -0.5
CLK4-211ENST00000522556 WDR73Q6P4I2 378 aa11.93□□□□□ -0.5
CLK4-211ENST00000522556 OSTCQ9NRP0 149 aa11.93□□□□□ -0.5
CLK4-211ENST00000522556 V9GYV3 84 aa11.93□□□□□ -0.5
CLK4-211ENST00000522556 A8MWL6 223 aa11.92□□□□□ -0.5
CLK4-211ENST00000522556 ADIRFQ15847 76 aa11.92□□□□□ -0.5
CLK4-211ENST00000522556 CT83Q5H943 113 aa11.92□□□□□ -0.5
CLK4-211ENST00000522556 LRP1BQ9NZR2 4599 aa11.91□□□□□ -0.5
CLK4-211ENST00000522556 HIGD1CA8MV81 97 aa11.91□□□□□ -0.5
CLK4-211ENST00000522556 WFDC2Q14508 124 aa11.91□□□□□ -0.5
CLK4-211ENST00000522556 PEA15Q15121 130 aa11.91□□□□□ -0.5
CLK4-211ENST00000522556 TMEM241Q24JQ0 296 aa11.91□□□□□ -0.5
CLK4-211ENST00000522556 RASL11AQ6T310 242 aa11.91□□□□□ -0.5
CLK4-211ENST00000522556 GATD1Q8NB37 220 aa11.91□□□□□ -0.5
CLK4-211ENST00000522556 KLK12Q9UKR0 248 aa11.91□□□□□ -0.5
CLK4-211ENST00000522556 DNAH5Q8TE73 4624 aa11.9□□□□□ -0.5
CLK4-211ENST00000522556 LRCOL1A6NCL2 159 aa11.9□□□□□ -0.5
CLK4-211ENST00000522556 GAS8-AS1O95177 125 aa11.9□□□□□ -0.5
CLK4-211ENST00000522556 MPV17L2Q567V2 206 aa11.9□□□□□ -0.5
CLK4-211ENST00000522556 TSKUQ8WUA8 353 aa11.9□□□□□ -0.5
CLK4-211ENST00000522556 RPL39LQ96EH5 51 aaKnown RBP11.9□□□□□ -0.5
CLK4-211ENST00000522556 KRTAP17-1Q9BYP8 105 aa11.9□□□□□ -0.5
CLK4-211ENST00000522556 NAT8Q9UHE5 227 aa11.9□□□□□ -0.5
CLK4-211ENST00000522556 IFITM2Q01629 132 aa11.89□□□□□ -0.51
CLK4-211ENST00000522556 LAGE3Q14657 143 aa11.89□□□□□ -0.51
CLK4-211ENST00000522556 FAM74A3Q4VXF1 159 aa11.89□□□□□ -0.51
CLK4-211ENST00000522556 MAPKAPK5-AS1Q8N8E1 139 aa11.89□□□□□ -0.51
CLK4-211ENST00000522556 H7C1H1 209 aa11.88□□□□□ -0.51
CLK4-211ENST00000522556 Q8N976 141 aa11.88□□□□□ -0.51
CLK4-211ENST00000522556 PSCAO43653 123 aa11.87□□□□□ -0.51
CLK4-211ENST00000522556 GAGE6Q13070 117 aa11.87□□□□□ -0.51
CLK4-211ENST00000522556 C15orf54Q8N8G6 183 aa11.87□□□□□ -0.51
CLK4-211ENST00000522556 NUP35Q8NFH5 326 aa11.87□□□□□ -0.51
CLK4-211ENST00000522556 CHCHD5Q9BSY4 110 aa11.87□□□□□ -0.51
CLK4-211ENST00000522556 NIT2Q9NQR4 276 aa11.87□□□□□ -0.51
CLK4-211ENST00000522556 URGCP-MRPS24S4R325 110 aa11.87□□□□□ -0.51
CLK4-211ENST00000522556 A0A087WX48 190 aa11.86□□□□□ -0.51
CLK4-211ENST00000522556 TMEM262E9PQX1 116 aa11.86□□□□□ -0.51
CLK4-211ENST00000522556 UBE2WQ96B02 151 aa11.86□□□□□ -0.51
CLK4-211ENST00000522556 GFRA4Q9GZZ7 299 aa11.86□□□□□ -0.51
CLK4-211ENST00000522556 A0A1B0GUT8 65 aa11.85□□□□□ -0.51
CLK4-211ENST00000522556 LECT2O14960 151 aa11.85□□□□□ -0.51
CLK4-211ENST00000522556 ATRAIDQ6UW56 229 aa11.85□□□□□ -0.51
CLK4-211ENST00000522556 RNF185Q96GF1 192 aa11.85□□□□□ -0.51
CLK4-211ENST00000522556 SMDT1Q9H4I9 107 aa11.85□□□□□ -0.51
CLK4-211ENST00000522556 RYR1P21817 5038 aa11.85□□□□□ -0.51
CLK4-211ENST00000522556 IQCJQ1A5X6 159 aa11.84□□□□□ -0.51
CLK4-211ENST00000522556 CLPSL2Q6UWE3 100 aa11.84□□□□□ -0.51
CLK4-211ENST00000522556 ENHOQ6UWT2 76 aa11.84□□□□□ -0.51
CLK4-211ENST00000522556 CHCHD7Q9BUK0 85 aa11.84□□□□□ -0.51
CLK4-211ENST00000522556 TRBV25-1A0A075B6N4 114 aa11.83□□□□□ -0.52
CLK4-211ENST00000522556 TRAV8-3A0A0A6YYJ7 113 aa11.83□□□□□ -0.52
CLK4-211ENST00000522556 IGHV1-24A0A0C4DH33 117 aa11.83□□□□□ -0.52
CLK4-211ENST00000522556 FAM231BA6NCW3 169 aa11.83□□□□□ -0.52
CLK4-211ENST00000522556 RBX1P62877 108 aa11.83□□□□□ -0.52
CLK4-211ENST00000522556 AMN1Q8IY45 258 aa11.83□□□□□ -0.52
CLK4-211ENST00000522556 APOBP04114 4563 aaKnown RBP11.82□□□□□ -0.52
CLK4-211ENST00000522556 HSPG2P98160 4391 aa11.82□□□□□ -0.52
CLK4-211ENST00000522556 IGKV2D-24A0A075B6R9 120 aa11.82□□□□□ -0.52
CLK4-211ENST00000522556 EREGO14944 169 aa11.82□□□□□ -0.52
CLK4-211ENST00000522556 ANGP03950 147 aaKnown RBP11.82□□□□□ -0.52
CLK4-211ENST00000522556 RPS10P46783 165 aaKnown RBP11.82□□□□□ -0.52
CLK4-211ENST00000522556 KRTAP10-1P60331 282 aa11.82□□□□□ -0.52
CLK4-211ENST00000522556 SMIM15Q7Z3B0 74 aa11.82□□□□□ -0.52
CLK4-211ENST00000522556 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.82□□□□□ -0.52
CLK4-211ENST00000522556 BORCS7Q96B45 105 aa11.82□□□□□ -0.52
CLK4-211ENST00000522556 SMIM27A0A1W2PRY6 76 aa11.81□□□□□ -0.52
CLK4-211ENST00000522556 SMKR1H3BMG3 65 aa11.81□□□□□ -0.52
CLK4-211ENST00000522556 TMEM97Q5BJF2 176 aa11.81□□□□□ -0.52
CLK4-211ENST00000522556 CLLU1Q5K131 121 aa11.81□□□□□ -0.52
CLK4-211ENST00000522556 Q8N814 137 aa11.81□□□□□ -0.52
CLK4-211ENST00000522556 BAALCQ8WXS3 180 aa11.81□□□□□ -0.52
CLK4-211ENST00000522556 TMEM191AQ9H0A3 160 aa11.81□□□□□ -0.52
CLK4-211ENST00000522556 NCR2O95944 276 aa11.8□□□□□ -0.52
CLK4-211ENST00000522556 RAB14P61106 215 aa11.8□□□□□ -0.52
CLK4-211ENST00000522556 KCNIP4Q6PIL6 250 aa11.8□□□□□ -0.52
CLK4-211ENST00000522556 TMEM243Q9BU79 118 aa11.8□□□□□ -0.52
CLK4-211ENST00000522556 TM2D2Q9BX73 214 aa11.8□□□□□ -0.52
CLK4-211ENST00000522556 NAT8BQ9UHF3 227 aa11.8□□□□□ -0.52
CLK4-211ENST00000522556 IGLV4-60A0A075B6I1 120 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms