RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 OVOL2Q9BRP0 275 aa1.32□□□□□ -2.2
CCNC-208ENST00000519617 PRADC1Q9BSG0 188 aa1.32□□□□□ -2.2
CCNC-208ENST00000519617 TPPP3Q9BW30 176 aa1.32□□□□□ -2.2
CCNC-208ENST00000519617 LCE3DQ9BYE3 92 aa1.32□□□□□ -2.2
CCNC-208ENST00000519617 C11orf68Q9H3H3 251 aaKnown RBP1.32□□□□□ -2.2
CCNC-208ENST00000519617 SMCO4Q9NRQ5 59 aa1.32□□□□□ -2.2
CCNC-208ENST00000519617 ANAPC11Q9NYG5 84 aa1.32□□□□□ -2.2
CCNC-208ENST00000519617 IL36BQ9NZH7 164 aa1.32□□□□□ -2.2
CCNC-208ENST00000519617 XCL2Q9UBD3 114 aa1.32□□□□□ -2.2
CCNC-208ENST00000519617 CARHSP1Q9Y2V2 147 aaKnown RBP1.32□□□□□ -2.2
CCNC-208ENST00000519617 KLK5Q9Y337 293 aaPredicted RBP1.32□□□□□ -2.2
CCNC-208ENST00000519617 YTHDF2Q9Y5A9 579 aaKnown RBP1.32□□□□□ -2.2
CCNC-208ENST00000519617 TRAV12-2A0A075B6T6 113 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 TRAV9-2A0A087WT02 112 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 TRGV1A0A0A0MS02 117 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 TRAV8-1A0A0A6YYK1 113 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 TRAV4A0A0B4J268 109 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 TRGV4A0A0C4DH28 118 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 TRBV10-1A0A0K0K1A3 114 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 IZUMO1RA6ND01 250 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 NUPR2A6NF83 97 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 F6UB75 175 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 F8WDY8 70 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 H3BNG1 76 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 K7EMI3 77 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 SH2D1AO60880 128 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 ZNF324O75467 553 aaPredicted RBP1.31□□□□□ -2.2
CCNC-208ENST00000519617 HLA-DQA1P01909 254 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 ATP5G1P05496 136 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 SNRPCP09234 159 aaKnown RBP1.31□□□□□ -2.2
CCNC-208ENST00000519617 ZNF705DP0CH99 300 aaPredicted RBP1.31□□□□□ -2.2
CCNC-208ENST00000519617 ZNF705BP0CI00 300 aaPredicted RBP1.31□□□□□ -2.2
CCNC-208ENST00000519617 RAB5AP20339 215 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 HLA-DMBP28068 263 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 AKR1D1P51857 326 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 FOXA3P55318 350 aaPredicted RBP1.31□□□□□ -2.2
CCNC-208ENST00000519617 TCL1AP56279 114 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 RAB4BP61018 213 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 RAB5BP61020 215 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 RPL23P62829 140 aaKnown RBP1.31□□□□□ -2.2
CCNC-208ENST00000519617 HBBP68871 147 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 DEFA6Q01524 100 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 IFITM2Q01629 132 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 GAGE2BQ13066 116 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 DAZ2Q13117 558 aaKnown RBP1.31□□□□□ -2.2
CCNC-208ENST00000519617 ERCC8Q13216 396 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 BTN1A1Q13410 526 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 RHOHQ15669 191 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 DEFB135Q30KP9 77 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 GAGE2EQ4V326 116 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 GAGE2AQ6NT46 116 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 ZFP2Q6ZN57 461 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 ZNF705AQ6ZN79 300 aaPredicted RBP1.31□□□□□ -2.2
CCNC-208ENST00000519617 C15orf53Q8NAA6 179 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 OR4C5Q8NGB2 326 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 Q8TAT8 98 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 C11orf45Q8TAV5 145 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 ISOC2Q96AB3 205 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 MRAP2Q96G30 205 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 ZC2HC1AQ96GY0 325 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 DNAJC30Q96LL9 226 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 FAM19A4Q96LR4 140 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 KIR2DL4Q99706 377 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 DPH3P1Q9H4G8 78 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 GAGE2DQ9UEU5 116 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 LAMTOR2Q9Y2Q5 125 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 CHTOPQ9Y3Y2 248 aaKnown RBP1.31□□□□□ -2.2
CCNC-208ENST00000519617 KIF25-AS1Q9Y6Z4 181 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 URGCP-MRPS24S4R325 110 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 U3KQK5 164 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 MGAM2Q2M2H8 2515 aa1.31□□□□□ -2.2
CCNC-208ENST00000519617 FBN1P35555 2871 aaKnown RBP1.3□□□□□ -2.2
CCNC-208ENST00000519617 TRBV24-1A0A075B6N3 115 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 TRAV26-1A0A087WT03 109 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 TMSB15BA0A087X1C1 80 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 DEFB131BA0A096LNP1 70 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 TRAV10A0A0B4J240 114 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 TRAV8-6A0A0B4J262 113 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 TRBV6-4A0A1B0GX49 114 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 SMIM27A0A1W2PRY6 76 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 C7orf77A4D0Y5 90 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 C19orf71A6NCJ1 209 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 RBMY1BA6NDE4 496 aaKnown RBP1.3□□□□□ -2.2
CCNC-208ENST00000519617 RBMY1EA6NEQ0 496 aaKnown RBP1.3□□□□□ -2.2
CCNC-208ENST00000519617 HIGD1CA8MV81 97 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 C3orf84H3BNL1 204 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 H3BVH4 76 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 K7EP13 123 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 M0R381 172 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 UBE2L6O14933 153 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 SNAI2O43623 268 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 NCR2O95944 276 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 APCSP02743 223 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 TYMSP04818 313 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 RBMY1DP0C7P1 496 aaKnown RBP1.3□□□□□ -2.2
CCNC-208ENST00000519617 ARMS2P0C7Q2 107 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 DEFB130BP0DP73 79 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 DEFB130AP0DP74 79 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 RAB4AP20338 218 aa1.3□□□□□ -2.2
CCNC-208ENST00000519617 PMCHP20382 165 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms