RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 DSCR8Q96T75 97 aa1.09□□□□□ -2.23
PTPN12-213ENST00000519553 NCOA6Q14686 2063 aaPredicted RBP1.09□□□□□ -2.24
PTPN12-213ENST00000519553 CPSF1Q10570 1443 aaKnown RBP1.08□□□□□ -2.24
PTPN12-213ENST00000519553 E9PCH4 1651 aa1.08□□□□□ -2.24
PTPN12-213ENST00000519553 ROBO1Q9Y6N7 1651 aa1.08□□□□□ -2.24
PTPN12-213ENST00000519553 LOC101927531A0A1B0GV80 90 aa1.08□□□□□ -2.24
PTPN12-213ENST00000519553 SSSCA1O60232 199 aa1.08□□□□□ -2.24
PTPN12-213ENST00000519553 SPINK8P0C7L1 97 aa1.08□□□□□ -2.24
PTPN12-213ENST00000519553 UBE2D1P51668 147 aa1.08□□□□□ -2.24
PTPN12-213ENST00000519553 FXYD3Q14802 87 aa1.08□□□□□ -2.24
PTPN12-213ENST00000519553 C10orf82Q8WW14 230 aa1.08□□□□□ -2.24
PTPN12-213ENST00000519553 DPH3P1Q9H4G8 78 aa1.08□□□□□ -2.24
PTPN12-213ENST00000519553 SPHKAPQ2M3C7 1700 aa1.08□□□□□ -2.24
PTPN12-213ENST00000519553 PEAK1Q9H792 1746 aa1.08□□□□□ -2.24
PTPN12-213ENST00000519553 MED12Q93074 2177 aa1.08□□□□□ -2.24
PTPN12-213ENST00000519553 RBBP6Q7Z6E9 1792 aaKnown RBP1.08□□□□□ -2.24
PTPN12-213ENST00000519553 C10orf71Q711Q0 1435 aa1.07□□□□□ -2.24
PTPN12-213ENST00000519553 UBE2L5PA0A1B0GUS4 154 aa1.07□□□□□ -2.24
PTPN12-213ENST00000519553 FAM24AA6NFZ4 105 aa1.07□□□□□ -2.24
PTPN12-213ENST00000519553 TMEM262E9PQX1 116 aa1.07□□□□□ -2.24
PTPN12-213ENST00000519553 H3BQ15 152 aa1.07□□□□□ -2.24
PTPN12-213ENST00000519553 M0R143 59 aa1.07□□□□□ -2.24
PTPN12-213ENST00000519553 SIX6O95475 246 aa1.07□□□□□ -2.24
PTPN12-213ENST00000519553 ATP5EP56381 51 aaPredicted RBP1.07□□□□□ -2.24
PTPN12-213ENST00000519553 UBE2L3P68036 154 aaKnown RBP1.07□□□□□ -2.24
PTPN12-213ENST00000519553 RBM3P98179 157 aaKnown RBP1.07□□□□□ -2.24
PTPN12-213ENST00000519553 S100A7L2Q5SY68 101 aa1.07□□□□□ -2.24
PTPN12-213ENST00000519553 C10orf99Q6UWK7 81 aa1.07□□□□□ -2.24
PTPN12-213ENST00000519553 CYP2G1PQ6ZSU1 146 aa1.07□□□□□ -2.24
PTPN12-213ENST00000519553 COMMD6Q7Z4G1 85 aa1.07□□□□□ -2.24
PTPN12-213ENST00000519553 C5orf56Q8N8D9 126 aa1.07□□□□□ -2.24
PTPN12-213ENST00000519553 ZNF469Q96JG9 3925 aaPredicted RBP1.07□□□□□ -2.24
PTPN12-213ENST00000519553 PLXNA1Q9UIW2 1896 aa1.07□□□□□ -2.24
PTPN12-213ENST00000519553 SHROOM2Q13796 1616 aa1.07□□□□□ -2.24
PTPN12-213ENST00000519553 RREB1Q92766 1687 aa1.07□□□□□ -2.24
PTPN12-213ENST00000519553 ZNF609O15014 1411 aa1.06□□□□□ -2.24
PTPN12-213ENST00000519553 SPTBP11277 2137 aa1.06□□□□□ -2.24
PTPN12-213ENST00000519553 TRAV13-2A0A0B4J235 113 aa1.06□□□□□ -2.24
PTPN12-213ENST00000519553 CLPSL1A2RUU4 121 aa1.06□□□□□ -2.24
PTPN12-213ENST00000519553 HCG22E2RYF7 251 aa1.06□□□□□ -2.24
PTPN12-213ENST00000519553 CCL3L1P16619 93 aa1.06□□□□□ -2.24
PTPN12-213ENST00000519553 DCDP81605 110 aaKnown RBP1.06□□□□□ -2.24
PTPN12-213ENST00000519553 LINC00575Q6W349 94 aa1.06□□□□□ -2.24
PTPN12-213ENST00000519553 SPTSSBQ8NFR3 76 aa1.06□□□□□ -2.24
PTPN12-213ENST00000519553 CYP4F30PQ9H0H9 118 aa1.06□□□□□ -2.24
PTPN12-213ENST00000519553 NWD2Q9ULI1 1742 aa1.06□□□□□ -2.24
PTPN12-213ENST00000519553 CASKIN1Q8WXD9 1431 aa1.06□□□□□ -2.24
PTPN12-213ENST00000519553 PATJQ8NI35 1801 aa1.05□□□□□ -2.24
PTPN12-213ENST00000519553 ABCC10Q5T3U5 1492 aa1.05□□□□□ -2.24
PTPN12-213ENST00000519553 PXDNQ92626 1479 aa1.05□□□□□ -2.24
PTPN12-213ENST00000519553 CAV3P56539 151 aa1.05□□□□□ -2.24
PTPN12-213ENST00000519553 PKIAP61925 76 aa1.05□□□□□ -2.24
PTPN12-213ENST00000519553 SSBP1Q04837 148 aaKnown RBP1.05□□□□□ -2.24
PTPN12-213ENST00000519553 KLKP1Q107X0 134 aa1.05□□□□□ -2.24
PTPN12-213ENST00000519553 ESPL1Q14674 2120 aa1.05□□□□□ -2.24
PTPN12-213ENST00000519553 ZNF56Q15929 161 aa1.05□□□□□ -2.24
PTPN12-213ENST00000519553 NCMAPQ5T1S8 102 aa1.05□□□□□ -2.24
PTPN12-213ENST00000519553 Q6ZQY7 126 aa1.05□□□□□ -2.24
PTPN12-213ENST00000519553 PPP1R1CQ8WVI7 109 aa1.05□□□□□ -2.24
PTPN12-213ENST00000519553 LINC00208Q96KT6 92 aa1.05□□□□□ -2.24
PTPN12-213ENST00000519553 CCL19Q99731 98 aa1.05□□□□□ -2.24
PTPN12-213ENST00000519553 NRXN2Q9P2S2 1712 aa1.05□□□□□ -2.24
PTPN12-213ENST00000519553 AFDNP55196 1824 aaKnown RBP1.05□□□□□ -2.24
PTPN12-213ENST00000519553 ARHGAP5Q13017 1502 aa1.05□□□□□ -2.24
PTPN12-213ENST00000519553 PHIPQ8WWQ0 1821 aa1.04□□□□□ -2.24
PTPN12-213ENST00000519553 TRBV7-1A0A0A6YYK4 115 aa1.04□□□□□ -2.24
PTPN12-213ENST00000519553 EFNA4P52798 201 aa1.04□□□□□ -2.24
PTPN12-213ENST00000519553 BET1LQ9NYM9 111 aa1.04□□□□□ -2.24
PTPN12-213ENST00000519553 MYH8P13535 1937 aa1.04□□□□□ -2.24
PTPN12-213ENST00000519553 TROQ12816 1431 aaPredicted RBP1.04□□□□□ -2.24
PTPN12-213ENST00000519553 SCRIBQ14160 1630 aa1.04□□□□□ -2.24
PTPN12-213ENST00000519553 ARAP2Q8WZ64 1704 aa1.03□□□□□ -2.24
PTPN12-213ENST00000519553 TNS1Q9HBL0 1735 aaKnown RBP1.03□□□□□ -2.24
PTPN12-213ENST00000519553 A0A087WTM6 91 aa1.03□□□□□ -2.24
PTPN12-213ENST00000519553 RBAKDNA6NC62 111 aa1.03□□□□□ -2.24
PTPN12-213ENST00000519553 NCR3O14931 201 aa1.03□□□□□ -2.24
PTPN12-213ENST00000519553 MPC2O95563 127 aa1.03□□□□□ -2.24
PTPN12-213ENST00000519553 ELOF1P60002 83 aaKnown RBP1.03□□□□□ -2.24
PTPN12-213ENST00000519553 C20orf197Q8N268 126 aa1.03□□□□□ -2.24
PTPN12-213ENST00000519553 COX7B2Q8TF08 81 aa1.03□□□□□ -2.24
PTPN12-213ENST00000519553 LINC00312Q9Y6C7 94 aa1.03□□□□□ -2.24
PTPN12-213ENST00000519553 TEX14Q8IWB6 1497 aa1.03□□□□□ -2.24
PTPN12-213ENST00000519553 TTC37Q6PGP7 1564 aa1.03□□□□□ -2.24
PTPN12-213ENST00000519553 LRRC37A3O60309 1634 aa1.03□□□□□ -2.24
PTPN12-213ENST00000519553 PARP14Q460N5 1801 aa1.03□□□□□ -2.25
PTPN12-213ENST00000519553 TRBV30A0A0K0K1B3 111 aa1.02□□□□□ -2.25
PTPN12-213ENST00000519553 S100A10P60903 97 aa1.02□□□□□ -2.25
PTPN12-213ENST00000519553 DOCK1Q14185 1865 aa1.02□□□□□ -2.25
PTPN12-213ENST00000519553 COL5A1-AS1Q5SY13 56 aa1.02□□□□□ -2.25
PTPN12-213ENST00000519553 PPIP5K1Q6PFW1 1433 aa1.02□□□□□ -2.25
PTPN12-213ENST00000519553 SNHG12Q9BXW3 62 aa1.02□□□□□ -2.25
PTPN12-213ENST00000519553 SCAPERQ9BY12 1400 aa1.02□□□□□ -2.25
PTPN12-213ENST00000519553 LINC00474Q9P2X8 69 aa1.02□□□□□ -2.25
PTPN12-213ENST00000519553 TENM3Q9P273 2699 aa1.02□□□□□ -2.25
PTPN12-213ENST00000519553 CC2D2AQ9P2K1 1620 aa1.01□□□□□ -2.25
PTPN12-213ENST00000519553 FAM74A4Q5TZK3 123 aa1.01□□□□□ -2.25
PTPN12-213ENST00000519553 TMEM14BQ9NUH8 114 aa1.01□□□□□ -2.25
PTPN12-213ENST00000519553 MED13LQ71F56 2210 aa1.01□□□□□ -2.25
PTPN12-213ENST00000519553 AKAP12Q02952 1782 aa1.01□□□□□ -2.25
PTPN12-213ENST00000519553 ANKRD26Q9UPS8 1709 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms