RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 LRCOL1A6NCL2 159 aa8.88□□□□□ -0.99
VEGFA-219ENST00000518824 F2Z2F3 143 aa8.88□□□□□ -0.99
VEGFA-219ENST00000518824 M0QY20 66 aa8.88□□□□□ -0.99
VEGFA-219ENST00000518824 SMIM17P0DL12 118 aa8.88□□□□□ -0.99
VEGFA-219ENST00000518824 FOXA3P55318 350 aaPredicted RBP8.88□□□□□ -0.99
VEGFA-219ENST00000518824 CACNG7P62955 275 aa8.88□□□□□ -0.99
VEGFA-219ENST00000518824 DEFB104AQ8WTQ1 72 aa8.88□□□□□ -0.99
VEGFA-219ENST00000518824 SMIM7Q9BQ49 75 aa8.88□□□□□ -0.99
VEGFA-219ENST00000518824 A0A087WWC5 75 aa8.87□□□□□ -0.99
VEGFA-219ENST00000518824 GATCO43716 136 aaKnown RBP8.87□□□□□ -0.99
VEGFA-219ENST00000518824 ERVFC1-1P60608 527 aa8.87□□□□□ -0.99
VEGFA-219ENST00000518824 WFDC2Q14508 124 aa8.87□□□□□ -0.99
VEGFA-219ENST00000518824 LINC01551Q86U37 167 aa8.87□□□□□ -0.99
VEGFA-219ENST00000518824 MAPKAPK5-AS1Q8N8E1 139 aa8.87□□□□□ -0.99
VEGFA-219ENST00000518824 CNFNQ9BYD5 112 aa8.87□□□□□ -0.99
VEGFA-219ENST00000518824 TRBV6-8A0A0A6YYG3 113 aa8.86□□□□□ -0.99
VEGFA-219ENST00000518824 ZNF727A8MUV8 499 aa8.86□□□□□ -0.99
VEGFA-219ENST00000518824 TWIST1Q15672 202 aa8.86□□□□□ -0.99
VEGFA-219ENST00000518824 FAM231DQ6ZW35 169 aa8.86□□□□□ -0.99
VEGFA-219ENST00000518824 KRTAP4-5Q9BYR2 181 aa8.86□□□□□ -0.99
VEGFA-219ENST00000518824 KLK12Q9UKR0 248 aa8.86□□□□□ -0.99
VEGFA-219ENST00000518824 HSPG2P98160 4391 aa8.85□□□□□ -0.99
VEGFA-219ENST00000518824 NDUFS6O75380 124 aaKnown RBP8.85□□□□□ -0.99
VEGFA-219ENST00000518824 WDR73Q6P4I2 378 aa8.85□□□□□ -0.99
VEGFA-219ENST00000518824 PGLYRP4Q96LB8 373 aa8.85□□□□□ -0.99
VEGFA-219ENST00000518824 DPH3P1Q9H4G8 78 aa8.85□□□□□ -0.99
VEGFA-219ENST00000518824 TRAV26-2A0A0B4J265 109 aa8.84□□□□□ -0.99
VEGFA-219ENST00000518824 TRGC1P0CF51 173 aa8.84□□□□□ -0.99
VEGFA-219ENST00000518824 LAGE3Q14657 143 aa8.84□□□□□ -0.99
VEGFA-219ENST00000518824 MPV17L2Q567V2 206 aa8.84□□□□□ -0.99
VEGFA-219ENST00000518824 APOBP04114 4563 aaKnown RBP8.83□□□□□ -1
VEGFA-219ENST00000518824 LECT2O14960 151 aa8.83□□□□□ -1
VEGFA-219ENST00000518824 PSCAO43653 123 aa8.83□□□□□ -1
VEGFA-219ENST00000518824 GAS8-AS1O95177 125 aa8.83□□□□□ -1
VEGFA-219ENST00000518824 KRTAP10-1P60331 282 aa8.83□□□□□ -1
VEGFA-219ENST00000518824 RPL23P62829 140 aaKnown RBP8.83□□□□□ -1
VEGFA-219ENST00000518824 GATD1Q8NB37 220 aa8.83□□□□□ -1
VEGFA-219ENST00000518824 A8MWL6 223 aa8.82□□□□□ -1
VEGFA-219ENST00000518824 TMEM262E9PQX1 116 aa8.82□□□□□ -1
VEGFA-219ENST00000518824 EREGO14944 169 aa8.82□□□□□ -1
VEGFA-219ENST00000518824 GAGE6Q13070 117 aa8.82□□□□□ -1
VEGFA-219ENST00000518824 RASL11AQ6T310 242 aa8.82□□□□□ -1
VEGFA-219ENST00000518824 Q8N976 141 aa8.82□□□□□ -1
VEGFA-219ENST00000518824 ISOC2Q96AB3 205 aa8.82□□□□□ -1
VEGFA-219ENST00000518824 UBE2WQ96B02 151 aa8.82□□□□□ -1
VEGFA-219ENST00000518824 OSTCQ9NRP0 149 aa8.82□□□□□ -1
VEGFA-219ENST00000518824 URGCP-MRPS24S4R325 110 aa8.82□□□□□ -1
VEGFA-219ENST00000518824 V9GYV3 84 aa8.82□□□□□ -1
VEGFA-219ENST00000518824 RYR1P21817 5038 aa8.82□□□□□ -1
VEGFA-219ENST00000518824 A0A087WX48 190 aa8.81□□□□□ -1
VEGFA-219ENST00000518824 CT83Q5H943 113 aa8.81□□□□□ -1
VEGFA-219ENST00000518824 ATRAIDQ6UW56 229 aa8.81□□□□□ -1
VEGFA-219ENST00000518824 ENHOQ6UWT2 76 aa8.81□□□□□ -1
VEGFA-219ENST00000518824 C15orf54Q8N8G6 183 aa8.81□□□□□ -1
VEGFA-219ENST00000518824 RPL39LQ96EH5 51 aaKnown RBP8.81□□□□□ -1
VEGFA-219ENST00000518824 CHCHD5Q9BSY4 110 aa8.81□□□□□ -1
VEGFA-219ENST00000518824 NIT2Q9NQR4 276 aa8.81□□□□□ -1
VEGFA-219ENST00000518824 PGPEP1Q9NXJ5 209 aa8.81□□□□□ -1
VEGFA-219ENST00000518824 TRAV8-3A0A0A6YYJ7 113 aa8.8□□□□□ -1
VEGFA-219ENST00000518824 HIGD1CA8MV81 97 aa8.8□□□□□ -1
VEGFA-219ENST00000518824 H7C1H1 209 aa8.8□□□□□ -1
VEGFA-219ENST00000518824 CDK2AP2O75956 126 aa8.8□□□□□ -1
VEGFA-219ENST00000518824 TMEM241Q24JQ0 296 aa8.8□□□□□ -1
VEGFA-219ENST00000518824 Q8N814 137 aa8.8□□□□□ -1
VEGFA-219ENST00000518824 TSKUQ8WUA8 353 aa8.8□□□□□ -1
VEGFA-219ENST00000518824 BAALCQ8WXS3 180 aa8.8□□□□□ -1
VEGFA-219ENST00000518824 IGKV2D-24A0A075B6R9 120 aa8.79□□□□□ -1
VEGFA-219ENST00000518824 ADIRFQ15847 76 aa8.79□□□□□ -1
VEGFA-219ENST00000518824 IQCJQ1A5X6 159 aa8.79□□□□□ -1
VEGFA-219ENST00000518824 CLPSL2Q6UWE3 100 aa8.79□□□□□ -1
VEGFA-219ENST00000518824 XGP55808 180 aa8.78□□□□□ -1
VEGFA-219ENST00000518824 RBX1P62877 108 aa8.78□□□□□ -1
VEGFA-219ENST00000518824 HAMPP81172 84 aa8.78□□□□□ -1
VEGFA-219ENST00000518824 PEA15Q15121 130 aa8.78□□□□□ -1
VEGFA-219ENST00000518824 NUP35Q8NFH5 326 aa8.78□□□□□ -1
VEGFA-219ENST00000518824 RNF185Q96GF1 192 aa8.78□□□□□ -1
VEGFA-219ENST00000518824 CHCHD7Q9BUK0 85 aa8.78□□□□□ -1
VEGFA-219ENST00000518824 TM2D2Q9BX73 214 aa8.78□□□□□ -1
VEGFA-219ENST00000518824 GFRA4Q9GZZ7 299 aa8.78□□□□□ -1
VEGFA-219ENST00000518824 NAT8Q9UHE5 227 aa8.78□□□□□ -1
VEGFA-219ENST00000518824 TRBV25-1A0A075B6N4 114 aa8.77□□□□□ -1.01
VEGFA-219ENST00000518824 IGHV1-24A0A0C4DH33 117 aa8.77□□□□□ -1.01
VEGFA-219ENST00000518824 ANGP03950 147 aaKnown RBP8.77□□□□□ -1.01
VEGFA-219ENST00000518824 FAM74A3Q4VXF1 159 aa8.77□□□□□ -1.01
VEGFA-219ENST00000518824 CDPF1Q6NVV7 123 aa8.77□□□□□ -1.01
VEGFA-219ENST00000518824 IGLV4-60A0A075B6I1 120 aa8.76□□□□□ -1.01
VEGFA-219ENST00000518824 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.76□□□□□ -1.01
VEGFA-219ENST00000518824 IGLV5-52A0A0A0MRZ9 124 aa8.76□□□□□ -1.01
VEGFA-219ENST00000518824 A0A1B0GUT8 65 aa8.76□□□□□ -1.01
VEGFA-219ENST00000518824 TMEM97Q5BJF2 176 aa8.76□□□□□ -1.01
VEGFA-219ENST00000518824 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.76□□□□□ -1.01
VEGFA-219ENST00000518824 C20orf203Q8NBC4 194 aa8.76□□□□□ -1.01
VEGFA-219ENST00000518824 GCSHP23434 173 aa8.75□□□□□ -1.01
VEGFA-219ENST00000518824 RPS10P46783 165 aaKnown RBP8.75□□□□□ -1.01
VEGFA-219ENST00000518824 IFITM2Q01629 132 aa8.75□□□□□ -1.01
VEGFA-219ENST00000518824 ELOBQ15370 118 aa8.75□□□□□ -1.01
VEGFA-219ENST00000518824 LINC01620Q4KN68 170 aa8.75□□□□□ -1.01
VEGFA-219ENST00000518824 KRTAP26-1Q6PEX3 210 aa8.75□□□□□ -1.01
VEGFA-219ENST00000518824 KCNIP4Q6PIL6 250 aa8.75□□□□□ -1.01
VEGFA-219ENST00000518824 AMN1Q8IY45 258 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms