RNA–Protein interactions for RNA: ENST00000517852.5

MDM2-221, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene MDM2, Length 393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-221ENST00000517852 DNAH2Q9P225 4427 aa-0.31□□□□□ -2.46
MDM2-221ENST00000517852 ALMS1Q8TCU4 4167 aa-0.31□□□□□ -2.46
MDM2-221ENST00000517852 TEP1Q99973 2627 aaKnown RBP-0.32□□□□□ -2.46
MDM2-221ENST00000517852 CUBNO60494 3623 aa-0.32□□□□□ -2.46
MDM2-221ENST00000517852 TNRC18O15417 2968 aaPredicted RBP-0.32□□□□□ -2.46
MDM2-221ENST00000517852 VPS13DQ5THJ4 4388 aa-0.32□□□□□ -2.46
MDM2-221ENST00000517852 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.32□□□□□ -2.46
MDM2-221ENST00000517852 PKHD1P08F94 4074 aa-0.32□□□□□ -2.46
MDM2-221ENST00000517852 CDK5RAP2Q96SN8 1893 aa-0.32□□□□□ -2.46
MDM2-221ENST00000517852 DYNC1H1Q14204 4646 aaKnown RBP-0.32□□□□□ -2.46
MDM2-221ENST00000517852 C10orf142B7Z368 130 aa-0.32□□□□□ -2.46
MDM2-221ENST00000517852 J3QLW9 94 aa-0.32□□□□□ -2.46
MDM2-221ENST00000517852 M0R2P5 195 aa-0.32□□□□□ -2.46
MDM2-221ENST00000517852 FAM74A4Q5TZK3 123 aa-0.32□□□□□ -2.46
MDM2-221ENST00000517852 SLC48A1Q6P1K1 146 aa-0.32□□□□□ -2.46
MDM2-221ENST00000517852 Q6ZRX8 168 aa-0.32□□□□□ -2.46
MDM2-221ENST00000517852 LSM2Q9Y333 95 aaKnown RBP-0.32□□□□□ -2.46
MDM2-221ENST00000517852 V9GYV3 84 aa-0.32□□□□□ -2.46
MDM2-221ENST00000517852 CREBBPQ92793 2442 aa-0.32□□□□□ -2.46
MDM2-221ENST00000517852 DNAH1Q9P2D7 4330 aa-0.32□□□□□ -2.46
MDM2-221ENST00000517852 PHIPQ8WWQ0 1821 aa-0.32□□□□□ -2.46
MDM2-221ENST00000517852 MAP1BP46821 2468 aaKnown RBP-0.32□□□□□ -2.46
MDM2-221ENST00000517852 NF1P21359 2839 aa-0.32□□□□□ -2.46
MDM2-221ENST00000517852 APOBP04114 4563 aaKnown RBP-0.33□□□□□ -2.46
MDM2-221ENST00000517852 TGP01266 2768 aa-0.33□□□□□ -2.46
MDM2-221ENST00000517852 ZNF142P52746 1687 aaPredicted RBP-0.33□□□□□ -2.46
MDM2-221ENST00000517852 PTPRMP28827 1452 aa-0.33□□□□□ -2.46
MDM2-221ENST00000517852 PKHD1L1Q86WI1 4243 aa-0.33□□□□□ -2.46
MDM2-221ENST00000517852 TRAV12-3A0A0B4J271 114 aa-0.33□□□□□ -2.46
MDM2-221ENST00000517852 GNG14A0A1W2PPG7 69 aa-0.33□□□□□ -2.46
MDM2-221ENST00000517852 H0YJX3 145 aa-0.33□□□□□ -2.46
MDM2-221ENST00000517852 ACYP2P14621 99 aa-0.33□□□□□ -2.46
MDM2-221ENST00000517852 SPCS2Q15005 226 aa-0.33□□□□□ -2.46
MDM2-221ENST00000517852 KRTAP20-1Q3LI63 56 aa-0.33□□□□□ -2.46
MDM2-221ENST00000517852 SPANXCQ9NY87 97 aa-0.33□□□□□ -2.46
MDM2-221ENST00000517852 KDM5CP41229 1560 aa-0.33□□□□□ -2.46
MDM2-221ENST00000517852 ANK3Q12955 4377 aaKnown RBP-0.33□□□□□ -2.46
MDM2-221ENST00000517852 DNAH7Q8WXX0 4024 aa-0.33□□□□□ -2.46
MDM2-221ENST00000517852 DNAH5Q8TE73 4624 aa-0.34□□□□□ -2.46
MDM2-221ENST00000517852 LYSTQ99698 3801 aa-0.34□□□□□ -2.46
MDM2-221ENST00000517852 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.34□□□□□ -2.46
MDM2-221ENST00000517852 VWFP04275 2813 aa-0.34□□□□□ -2.46
MDM2-221ENST00000517852 MAP1AP78559 2803 aaPredicted RBP-0.34□□□□□ -2.46
MDM2-221ENST00000517852 PKD1P98161 4303 aa-0.34□□□□□ -2.46
MDM2-221ENST00000517852 TRGV1A0A0A0MS02 117 aa-0.34□□□□□ -2.46
MDM2-221ENST00000517852 CCDC153Q494R4 210 aa-0.34□□□□□ -2.46
MDM2-221ENST00000517852 SETD2Q9BYW2 2564 aaPredicted RBP-0.34□□□□□ -2.46
MDM2-221ENST00000517852 MYH9P35579 1960 aaKnown RBP-0.34□□□□□ -2.46
MDM2-221ENST00000517852 NBEAL1Q6ZS30 2694 aa-0.34□□□□□ -2.46
MDM2-221ENST00000517852 SACSQ9NZJ4 4579 aa-0.35□□□□□ -2.46
MDM2-221ENST00000517852 DSPP15924 2871 aaKnown RBP-0.35□□□□□ -2.46
MDM2-221ENST00000517852 CMYA5Q8N3K9 4069 aa-0.35□□□□□ -2.47
MDM2-221ENST00000517852 LAMA1P25391 3075 aa-0.35□□□□□ -2.47
MDM2-221ENST00000517852 PARP14Q460N5 1801 aa-0.35□□□□□ -2.47
MDM2-221ENST00000517852 TMEM14DPA8MWL7 114 aa-0.35□□□□□ -2.47
MDM2-221ENST00000517852 DBIP07108 87 aaKnown RBP-0.35□□□□□ -2.47
MDM2-221ENST00000517852 GCHFRP30047 84 aa-0.35□□□□□ -2.47
MDM2-221ENST00000517852 INSL4Q14641 139 aa-0.35□□□□□ -2.47
MDM2-221ENST00000517852 LINC01545Q5VT33 79 aa-0.35□□□□□ -2.47
MDM2-221ENST00000517852 SPANXA1Q9NS26 97 aa-0.35□□□□□ -2.47
MDM2-221ENST00000517852 NDUFA12Q9UI09 145 aa-0.35□□□□□ -2.47
MDM2-221ENST00000517852 MYH6P13533 1939 aa-0.35□□□□□ -2.47
MDM2-221ENST00000517852 PRKDCP78527 4128 aaKnown RBP-0.35□□□□□ -2.47
MDM2-221ENST00000517852 WDR87Q6ZQQ6 2873 aa-0.35□□□□□ -2.47
MDM2-221ENST00000517852 NIPBLQ6KC79 2804 aaeCLIP-0.36□□□□□ -2.47
MDM2-221ENST00000517852 COL6A5A8TX70 2615 aa-0.36□□□□□ -2.47
MDM2-221ENST00000517852 TRBV20-1A0A075B6N2 111 aa-0.36□□□□□ -2.47
MDM2-221ENST00000517852 NBPF19A0A087WUL8 3843 aa-0.36□□□□□ -2.47
MDM2-221ENST00000517852 CFDP00746 253 aaPredicted RBP-0.36□□□□□ -2.47
MDM2-221ENST00000517852 NCS1P62166 190 aa-0.36□□□□□ -2.47
MDM2-221ENST00000517852 SSBP3-AS1Q7Z2R9 100 aa-0.36□□□□□ -2.47
MDM2-221ENST00000517852 BATF3Q9NR55 127 aa-0.36□□□□□ -2.47
MDM2-221ENST00000517852 ACANP16112 2415 aa-0.36□□□□□ -2.47
MDM2-221ENST00000517852 ARAP1Q96P48 1450 aa-0.36□□□□□ -2.47
MDM2-221ENST00000517852 ARFGEF1Q9Y6D6 1849 aa-0.36□□□□□ -2.47
MDM2-221ENST00000517852 SVEP1Q4LDE5 3571 aa-0.36□□□□□ -2.47
MDM2-221ENST00000517852 WNK1Q9H4A3 2382 aa-0.37□□□□□ -2.47
MDM2-221ENST00000517852 CSMD3Q7Z407 3707 aa-0.37□□□□□ -2.47
MDM2-221ENST00000517852 USF3Q68DE3 2245 aa-0.37□□□□□ -2.47
MDM2-221ENST00000517852 UBE2DNLQ8IWF7 75 aa-0.37□□□□□ -2.47
MDM2-221ENST00000517852 USP9YO00507 2555 aaPredicted RBP-0.37□□□□□ -2.47
MDM2-221ENST00000517852 ERCC6Q03468 1493 aa-0.37□□□□□ -2.47
MDM2-221ENST00000517852 CSPG4Q6UVK1 2322 aa-0.37□□□□□ -2.47
MDM2-221ENST00000517852 EP300Q09472 2414 aaPredicted RBP-0.37□□□□□ -2.47
MDM2-221ENST00000517852 EYSQ5T1H1 3165 aa-0.37□□□□□ -2.47
MDM2-221ENST00000517852 PKD1L1Q8TDX9 2849 aa-0.37□□□□□ -2.47
MDM2-221ENST00000517852 USP9XQ93008 2570 aaPredicted RBP-0.38□□□□□ -2.47
MDM2-221ENST00000517852 VPS13BQ7Z7G8 4022 aa-0.38□□□□□ -2.47
MDM2-221ENST00000517852 NRXN2Q9P2S2 1712 aa-0.38□□□□□ -2.47
MDM2-221ENST00000517852 ZNF815PA8K554 130 aa-0.38□□□□□ -2.47
MDM2-221ENST00000517852 SPRR2DP22532 72 aa-0.38□□□□□ -2.47
MDM2-221ENST00000517852 EDDM3BP56851 147 aa-0.38□□□□□ -2.47
MDM2-221ENST00000517852 RBM3P98179 157 aaKnown RBP-0.38□□□□□ -2.47
MDM2-221ENST00000517852 MORN2Q502X0 79 aa-0.38□□□□□ -2.47
MDM2-221ENST00000517852 MMGT1Q8N4V1 131 aa-0.38□□□□□ -2.47
MDM2-221ENST00000517852 CYP4F30PQ9H0H9 118 aa-0.38□□□□□ -2.47
MDM2-221ENST00000517852 MRPL40Q9NQ50 206 aaKnown RBP-0.38□□□□□ -2.47
MDM2-221ENST00000517852 SAR1AQ9NR31 198 aa-0.38□□□□□ -2.47
MDM2-221ENST00000517852 SCP2D1Q9UJQ7 156 aa-0.38□□□□□ -2.47
MDM2-221ENST00000517852 SYNJ1O43426 1573 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms